EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015903 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 49188 bases
Position: chrscaffold_60:10762741-10811928
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000013339	ResIII	PF04851.15	6.3e-12	1	1
ENSLAFP00000013339	DEAD	PF00270.29	2.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015904	-	2232	-	ENSLAFP00000013339	744 (aa)	-	G3TFY4

Gene Model

Click here to download ENSLAFG00000015903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015903	-	87	38.404	ENSLAFG00000011363	ASCC3	62	38.404
ENSLAFG00000015903	-	91	33.048	ENSLAFG00000015626	SNRNP200	62	33.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015903	-	99	90.310	ENSG00000162669	HFM1	52	90.310	Homo_sapiens
ENSLAFG00000015903	-	89	69.894	ENSAPOG00000005304	hfm1	74	69.894	Acanthochromis_polyacanthus
ENSLAFG00000015903	-	99	90.713	ENSAMEG00000000432	HFM1	52	90.713	Ailuropoda_melanoleuca
ENSLAFG00000015903	-	90	70.597	ENSACIG00000021553	hfm1	62	70.597	Amphilophus_citrinellus
ENSLAFG00000015903	-	91	67.061	ENSAOCG00000022839	hfm1	78	70.788	Amphiprion_ocellaris
ENSLAFG00000015903	-	91	67.208	ENSAPEG00000014316	hfm1	79	70.833	Amphiprion_percula
ENSLAFG00000015903	-	90	70.492	ENSATEG00000019181	hfm1	54	70.492	Anabas_testudineus
ENSLAFG00000015903	-	97	78.099	ENSAPLG00000013639	HFM1	51	78.099	Anas_platyrhynchos
ENSLAFG00000015903	-	99	88.964	ENSANAG00000029513	HFM1	52	88.964	Aotus_nancymaae
ENSLAFG00000015903	-	90	68.955	ENSACLG00000009033	hfm1	79	66.373	Astatotilapia_calliptera
ENSLAFG00000015903	-	99	89.098	ENSBTAG00000020856	HFM1	52	89.098	Bos_taurus
ENSLAFG00000015903	-	99	89.098	ENSCJAG00000001843	HFM1	52	89.098	Callithrix_jacchus
ENSLAFG00000015903	-	99	89.906	ENSCAFG00000020187	HFM1	52	89.906	Canis_familiaris
ENSLAFG00000015903	-	99	88.022	ENSTSYG00000014250	HFM1	52	88.022	Carlito_syrichta
ENSLAFG00000015903	-	100	86.156	ENSCPOG00000007421	HFM1	53	86.156	Cavia_porcellus
ENSLAFG00000015903	-	99	89.233	ENSCCAG00000033206	HFM1	52	89.233	Cebus_capucinus
ENSLAFG00000015903	-	99	90.175	ENSCATG00000030987	HFM1	52	90.175	Cercocebus_atys
ENSLAFG00000015903	-	100	86.962	ENSCLAG00000005173	HFM1	50	86.962	Chinchilla_lanigera
ENSLAFG00000015903	-	87	53.284	ENSCSAVG00000005094	-	93	53.284	Ciona_savignyi
ENSLAFG00000015903	-	100	76.494	ENSCGRG00001016995	Hfm1	51	76.494	Cricetulus_griseus_chok1gshd
ENSLAFG00000015903	-	100	84.430	ENSCGRG00000017181	Hfm1	52	84.430	Cricetulus_griseus_crigri
ENSLAFG00000015903	-	90	68.107	ENSCSEG00000017659	hfm1	62	68.107	Cynoglossus_semilaevis
ENSLAFG00000015903	-	81	70.132	ENSCVAG00000005075	hfm1	73	70.132	Cyprinodon_variegatus
ENSLAFG00000015903	-	93	67.529	ENSDARG00000104288	hfm1	62	67.529	Danio_rerio
ENSLAFG00000015903	-	99	89.098	ENSDNOG00000004776	HFM1	50	89.098	Dasypus_novemcinctus
ENSLAFG00000015903	-	99	84.211	ENSDORG00000014661	Hfm1	52	84.211	Dipodomys_ordii
ENSLAFG00000015903	-	58	66.207	ENSEBUG00000006133	-	88	69.281	Eptatretus_burgeri
ENSLAFG00000015903	-	88	93.282	ENSEASG00005015424	HFM1	66	93.282	Equus_asinus_asinus
ENSLAFG00000015903	-	99	91.117	ENSECAG00000024039	HFM1	50	91.117	Equus_caballus
ENSLAFG00000015903	-	90	72.552	ENSELUG00000018944	hfm1	72	72.552	Esox_lucius
ENSLAFG00000015903	-	99	90.040	ENSFCAG00000029116	HFM1	52	90.040	Felis_catus
ENSLAFG00000015903	-	99	87.483	ENSFDAG00000020816	HFM1	50	87.483	Fukomys_damarensis
ENSLAFG00000015903	-	84	70.080	ENSGMOG00000017436	hfm1	68	70.080	Gadus_morhua
ENSLAFG00000015903	-	90	71.174	ENSGAFG00000018093	hfm1	76	67.747	Gambusia_affinis
ENSLAFG00000015903	-	85	70.616	ENSGACG00000015686	hfm1	69	70.616	Gasterosteus_aculeatus
ENSLAFG00000015903	-	99	90.175	ENSGGOG00000038524	HFM1	52	90.175	Gorilla_gorilla
ENSLAFG00000015903	-	90	70.299	ENSHBUG00000007309	hfm1	64	70.299	Haplochromis_burtoni
ENSLAFG00000015903	-	90	67.064	ENSHCOG00000019632	hfm1	81	67.064	Hippocampus_comes
ENSLAFG00000015903	-	91	69.604	ENSIPUG00000017020	hfm1	74	66.765	Ictalurus_punctatus
ENSLAFG00000015903	-	99	85.599	ENSJJAG00000017198	Hfm1	53	85.599	Jaculus_jaculus
ENSLAFG00000015903	-	90	70.000	ENSKMAG00000002282	hfm1	69	70.000	Kryptolebias_marmoratus
ENSLAFG00000015903	-	90	70.641	ENSLBEG00000006759	hfm1	79	66.764	Labrus_bergylta
ENSLAFG00000015903	-	90	75.740	ENSLACG00000010698	HFM1	64	75.888	Latimeria_chalumnae
ENSLAFG00000015903	-	96	70.932	ENSLOCG00000004931	hfm1	66	70.932	Lepisosteus_oculatus
ENSLAFG00000015903	-	99	85.294	ENSMFAG00000003649	HFM1	52	85.294	Macaca_fascicularis
ENSLAFG00000015903	-	99	90.040	ENSMMUG00000006819	HFM1	52	90.040	Macaca_mulatta
ENSLAFG00000015903	-	90	71.833	ENSMAMG00000004623	hfm1	76	71.833	Mastacembelus_armatus
ENSLAFG00000015903	-	90	68.955	ENSMZEG00005004679	hfm1	79	66.373	Maylandia_zebra
ENSLAFG00000015903	-	93	75.396	ENSMGAG00000008437	HFM1	75	79.967	Meleagris_gallopavo
ENSLAFG00000015903	-	99	85.830	ENSMAUG00000018858	Hfm1	51	85.830	Mesocricetus_auratus
ENSLAFG00000015903	-	99	89.771	ENSMICG00000037935	HFM1	52	89.771	Microcebus_murinus
ENSLAFG00000015903	-	99	83.445	ENSMOCG00000014812	Hfm1	52	83.445	Microtus_ochrogaster
ENSLAFG00000015903	-	94	65.050	ENSMMOG00000006148	hfm1	78	65.050	Mola_mola
ENSLAFG00000015903	-	90	70.939	ENSMALG00000002401	hfm1	78	66.049	Monopterus_albus
ENSLAFG00000015903	-	99	83.984	ENSMUSG00000043410	Hfm1	52	83.984	Mus_musculus
ENSLAFG00000015903	-	99	84.118	MGP_PahariEiJ_G0017268	Hfm1	52	84.118	Mus_pahari
ENSLAFG00000015903	-	99	83.984	MGP_SPRETEiJ_G0028495	Hfm1	52	83.984	Mus_spretus
ENSLAFG00000015903	-	99	89.098	ENSMPUG00000004594	HFM1	50	89.098	Mustela_putorius_furo
ENSLAFG00000015903	-	99	89.637	ENSMLUG00000010200	HFM1	52	89.637	Myotis_lucifugus
ENSLAFG00000015903	-	89	68.326	ENSNBRG00000002910	hfm1	78	66.517	Neolamprologus_brichardi
ENSLAFG00000015903	-	99	87.079	ENSNLEG00000010285	HFM1	52	87.079	Nomascus_leucogenys
ENSLAFG00000015903	-	100	76.478	ENSOPRG00000013916	HFM1	52	76.478	Ochotona_princeps
ENSLAFG00000015903	-	93	69.710	ENSONIG00000010590	hfm1	66	69.710	Oreochromis_niloticus
ENSLAFG00000015903	-	90	65.919	ENSORLG00000026844	hfm1	82	65.919	Oryzias_latipes
ENSLAFG00000015903	-	91	59.178	ENSORLG00020002951	hfm1	52	59.178	Oryzias_latipes_hni
ENSLAFG00000015903	-	99	88.560	ENSOGAG00000032369	HFM1	60	88.560	Otolemur_garnettii
ENSLAFG00000015903	-	99	89.098	ENSOARG00000015812	HFM1	52	89.098	Ovis_aries
ENSLAFG00000015903	-	99	90.310	ENSPPAG00000024582	HFM1	56	90.310	Pan_paniscus
ENSLAFG00000015903	-	99	90.040	ENSPPRG00000003270	HFM1	52	90.040	Panthera_pardus
ENSLAFG00000015903	-	99	90.040	ENSPTIG00000018881	HFM1	52	90.040	Panthera_tigris_altaica
ENSLAFG00000015903	-	99	90.040	ENSPTRG00000000948	HFM1	52	90.040	Pan_troglodytes
ENSLAFG00000015903	-	99	90.175	ENSPANG00000009838	HFM1	52	90.175	Papio_anubis
ENSLAFG00000015903	-	90	70.833	ENSPKIG00000003810	hfm1	78	68.382	Paramormyrops_kingsleyae
ENSLAFG00000015903	-	90	67.015	ENSPMGG00000011059	hfm1	81	67.015	Periophthalmus_magnuspinnatus
ENSLAFG00000015903	-	99	85.330	ENSPEMG00000022852	Hfm1	52	85.330	Peromyscus_maniculatus_bairdii
ENSLAFG00000015903	-	99	81.561	ENSPCIG00000014233	HFM1	50	81.561	Phascolarctos_cinereus
ENSLAFG00000015903	-	90	71.791	ENSPFOG00000017194	hfm1	64	71.791	Poecilia_formosa
ENSLAFG00000015903	-	91	71.704	ENSPLAG00000000571	hfm1	61	71.704	Poecilia_latipinna
ENSLAFG00000015903	-	91	71.852	ENSPMEG00000019475	hfm1	62	71.852	Poecilia_mexicana
ENSLAFG00000015903	-	90	70.746	ENSPREG00000007803	hfm1	86	57.455	Poecilia_reticulata
ENSLAFG00000015903	-	99	90.040	ENSPPYG00000001163	HFM1	52	90.040	Pongo_abelii
ENSLAFG00000015903	-	99	84.054	ENSPVAG00000009713	HFM1	53	84.054	Pteropus_vampyrus
ENSLAFG00000015903	-	90	68.806	ENSPNYG00000001795	hfm1	79	66.373	Pundamilia_nyererei
ENSLAFG00000015903	-	91	67.894	ENSPNAG00000010865	hfm1	67	67.894	Pygocentrus_nattereri
ENSLAFG00000015903	-	99	83.984	ENSRNOG00000023299	Hfm1	52	83.984	Rattus_norvegicus
ENSLAFG00000015903	-	99	90.040	ENSRROG00000045569	HFM1	52	90.040	Rhinopithecus_roxellana
ENSLAFG00000015903	-	99	88.964	ENSSBOG00000027456	HFM1	53	88.964	Saimiri_boliviensis_boliviensis
ENSLAFG00000015903	-	90	80.149	ENSSHAG00000014616	-	76	80.149	Sarcophilus_harrisii
ENSLAFG00000015903	-	90	70.074	ENSSMAG00000006907	hfm1	69	67.751	Scophthalmus_maximus
ENSLAFG00000015903	-	90	67.463	ENSSDUG00000011424	hfm1	75	67.463	Seriola_dumerili
ENSLAFG00000015903	-	90	67.459	ENSSLDG00000016386	hfm1	74	67.459	Seriola_lalandi_dorsalis
ENSLAFG00000015903	-	93	66.428	ENSSPAG00000001023	hfm1	78	66.428	Stegastes_partitus
ENSLAFG00000015903	-	99	89.367	ENSSSCG00000006912	HFM1	54	89.367	Sus_scrofa
ENSLAFG00000015903	-	90	80.299	ENSTGUG00000006172	HFM1	70	80.299	Taeniopygia_guttata
ENSLAFG00000015903	-	63	67.094	ENSTNIG00000006962	hfm1	96	67.094	Tetraodon_nigroviridis
ENSLAFG00000015903	-	99	89.771	ENSTTRG00000013933	HFM1	53	89.771	Tursiops_truncatus
ENSLAFG00000015903	-	99	90.040	ENSVPAG00000011331	HFM1	51	90.040	Vicugna_pacos
ENSLAFG00000015903	-	88	91.298	ENSVVUG00000020760	HFM1	65	91.298	Vulpes_vulpes
ENSLAFG00000015903	-	91	68.142	ENSXMAG00000004178	hfm1	75	68.142	Xiphophorus_maculatus