EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000015951 (Gene tree)
Gene ID: -
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 7975 bases
Position: chrscaffold_34:14194733-14202707
Accession: 10774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000023307	RRM_1	PF00076.22	2.1e-30	1	2
ENSLAFP00000023307	RRM_1	PF00076.22	2.1e-30	2	2
ENSLAFP00000013378	RRM_1	PF00076.22	2.9e-30	1	2
ENSLAFP00000013378	RRM_1	PF00076.22	2.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015950	SFPQ-202	2112	-	ENSLAFP00000013378	704 (aa)	-	G3TG13
ENSLAFT00000036236	SFPQ-201	1899	-	ENSLAFP00000023307	632 (aa)	-	G3U649

Gene Model

Click here to download ENSLAFG00000015951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000015951	SFPQ	59	66.755	ENSLAFG00000010968	PSPC1	89	58.723
ENSLAFG00000015951	SFPQ	51	67.913	ENSLAFG00000013422	NONO	74	69.501

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015951	SFPQ	75	94.835	ENSG00000116560	SFPQ	97	99.537	Homo_sapiens
ENSLAFG00000015951	SFPQ	68	74.365	ENSAPOG00000024257	sfpq	62	74.150	Acanthochromis_polyacanthus
ENSLAFG00000015951	SFPQ	70	99.773	ENSAMEG00000000815	SFPQ	100	99.773	Ailuropoda_melanoleuca
ENSLAFG00000015951	SFPQ	87	62.364	ENSACIG00000000905	sfpq	72	70.481	Amphilophus_citrinellus
ENSLAFG00000015951	SFPQ	68	74.014	ENSAOCG00000002889	sfpq	61	73.469	Amphiprion_ocellaris
ENSLAFG00000015951	SFPQ	68	74.014	ENSAPEG00000016556	sfpq	61	73.469	Amphiprion_percula
ENSLAFG00000015951	SFPQ	80	68.898	ENSATEG00000002981	sfpq	67	75.854	Anabas_testudineus
ENSLAFG00000015951	SFPQ	55	76.286	ENSANAG00000037798	-	99	76.000	Aotus_nancymaae
ENSLAFG00000015951	SFPQ	56	75.141	ENSANAG00000021268	-	100	74.074	Aotus_nancymaae
ENSLAFG00000015951	SFPQ	88	92.453	ENSANAG00000027438	-	68	83.220	Aotus_nancymaae
ENSLAFG00000015951	SFPQ	70	71.847	ENSACLG00000022332	sfpq	63	73.303	Astatotilapia_calliptera
ENSLAFG00000015951	SFPQ	72	68.502	ENSAMXG00000011538	sfpq	65	72.273	Astyanax_mexicanus
ENSLAFG00000015951	SFPQ	75	94.835	ENSBTAG00000016328	SFPQ	68	99.380	Bos_taurus
ENSLAFG00000015951	SFPQ	75	94.628	ENSCJAG00000001431	SFPQ	68	99.174	Callithrix_jacchus
ENSLAFG00000015951	SFPQ	99	81.762	ENSCAFG00000018271	-	73	89.691	Canis_familiaris
ENSLAFG00000015951	SFPQ	100	90.780	ENSCAFG00000003595	-	100	90.780	Canis_familiaris
ENSLAFG00000015951	SFPQ	85	83.195	ENSCAFG00000017608	-	71	88.406	Canis_familiaris
ENSLAFG00000015951	SFPQ	99	81.636	ENSCAFG00020004881	-	73	89.918	Canis_lupus_dingo
ENSLAFG00000015951	SFPQ	56	90.883	ENSCAFG00020010702	-	100	90.883	Canis_lupus_dingo
ENSLAFG00000015951	SFPQ	79	92.613	ENSCHIG00000023097	SFPQ	86	96.694	Capra_hircus
ENSLAFG00000015951	SFPQ	55	85.387	ENSTSYG00000035106	-	98	85.387	Carlito_syrichta
ENSLAFG00000015951	SFPQ	56	99.715	ENSTSYG00000037120	-	100	99.715	Carlito_syrichta
ENSLAFG00000015951	SFPQ	56	90.883	ENSCPOG00000015018	-	100	88.430	Cavia_porcellus
ENSLAFG00000015951	SFPQ	75	94.421	ENSCCAG00000029361	-	68	98.967	Cebus_capucinus
ENSLAFG00000015951	SFPQ	69	73.320	ENSCATG00000032664	-	67	73.673	Cercocebus_atys
ENSLAFG00000015951	SFPQ	62	96.684	ENSCATG00000036179	-	62	96.217	Cercocebus_atys
ENSLAFG00000015951	SFPQ	56	99.715	ENSCLAG00000009583	-	100	99.715	Chinchilla_lanigera
ENSLAFG00000015951	SFPQ	75	94.835	ENSCSAG00000001082	SFPQ	68	99.380	Chlorocebus_sabaeus
ENSLAFG00000015951	SFPQ	60	95.000	ENSCHOG00000009131	SFPQ	100	95.000	Choloepus_hoffmanni
ENSLAFG00000015951	SFPQ	70	92.650	ENSCPBG00000018674	SFPQ	69	93.018	Chrysemys_picta_bellii
ENSLAFG00000015951	SFPQ	56	99.715	ENSCANG00000028087	-	100	99.715	Colobus_angolensis_palliatus
ENSLAFG00000015951	SFPQ	85	92.013	ENSCGRG00001011698	Sfpq	97	83.994	Cricetulus_griseus_chok1gshd
ENSLAFG00000015951	SFPQ	68	99.768	ENSCGRG00000010128	Sfpq	95	99.768	Cricetulus_griseus_crigri
ENSLAFG00000015951	SFPQ	83	65.977	ENSCSEG00000007852	sfpq	66	73.165	Cynoglossus_semilaevis
ENSLAFG00000015951	SFPQ	94	56.381	ENSCVAG00000019538	sfpq	64	67.606	Cyprinodon_variegatus
ENSLAFG00000015951	SFPQ	99	56.329	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSLAFG00000015951	SFPQ	100	89.635	ENSDNOG00000049454	SFPQ	97	89.635	Dasypus_novemcinctus
ENSLAFG00000015951	SFPQ	75	94.835	ENSDORG00000008109	Sfpq	97	88.218	Dipodomys_ordii
ENSLAFG00000015951	SFPQ	75	92.575	ENSETEG00000001095	SFPQ	61	92.575	Echinops_telfairi
ENSLAFG00000015951	SFPQ	100	89.359	ENSEASG00005012012	SFPQ	97	89.359	Equus_asinus_asinus
ENSLAFG00000015951	SFPQ	100	89.359	ENSECAG00000000642	SFPQ	97	89.359	Equus_caballus
ENSLAFG00000015951	SFPQ	68	72.685	ENSELUG00000023145	sfpq	66	71.462	Esox_lucius
ENSLAFG00000015951	SFPQ	100	96.028	ENSFCAG00000042862	SFPQ	97	90.722	Felis_catus
ENSLAFG00000015951	SFPQ	56	94.872	ENSFALG00000000731	SFPQ	100	94.872	Ficedula_albicollis
ENSLAFG00000015951	SFPQ	56	89.459	ENSFDAG00000017723	-	100	90.652	Fukomys_damarensis
ENSLAFG00000015951	SFPQ	69	68.506	ENSFHEG00000015200	sfpq	56	68.966	Fundulus_heteroclitus
ENSLAFG00000015951	SFPQ	69	74.713	ENSGMOG00000011950	SFPQ	74	74.769	Gadus_morhua
ENSLAFG00000015951	SFPQ	74	69.133	ENSGMOG00000011957	sfpq	65	73.550	Gadus_morhua
ENSLAFG00000015951	SFPQ	86	58.393	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSLAFG00000015951	SFPQ	86	64.748	ENSGACG00000002034	sfpq	68	74.424	Gasterosteus_aculeatus
ENSLAFG00000015951	SFPQ	78	99.307	ENSGGOG00000026354	SFPQ	100	99.715	Gorilla_gorilla
ENSLAFG00000015951	SFPQ	70	71.847	ENSHBUG00000016818	sfpq	63	73.303	Haplochromis_burtoni
ENSLAFG00000015951	SFPQ	100	89.691	ENSHGLG00000012001	SFPQ	97	89.691	Heterocephalus_glaber_female
ENSLAFG00000015951	SFPQ	56	99.715	ENSHGLG00100004136	-	100	99.715	Heterocephalus_glaber_male
ENSLAFG00000015951	SFPQ	70	72.545	ENSHCOG00000008612	sfpq	70	68.140	Hippocampus_comes
ENSLAFG00000015951	SFPQ	71	70.000	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSLAFG00000015951	SFPQ	56	99.715	ENSSTOG00000014004	-	100	99.715	Ictidomys_tridecemlineatus
ENSLAFG00000015951	SFPQ	69	99.174	ENSJJAG00000015633	Sfpq	97	82.362	Jaculus_jaculus
ENSLAFG00000015951	SFPQ	96	56.279	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSLAFG00000015951	SFPQ	69	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSLAFG00000015951	SFPQ	81	69.922	ENSLOCG00000001067	sfpq	68	81.654	Lepisosteus_oculatus
ENSLAFG00000015951	SFPQ	75	95.455	ENSMFAG00000000797	SFPQ	68	99.174	Macaca_fascicularis
ENSLAFG00000015951	SFPQ	75	95.455	ENSMMUG00000019154	SFPQ	68	99.174	Macaca_mulatta
ENSLAFG00000015951	SFPQ	75	94.835	ENSMNEG00000038895	SFPQ	97	89.504	Macaca_nemestrina
ENSLAFG00000015951	SFPQ	56	96.581	ENSMLEG00000010643	-	100	96.581	Mandrillus_leucophaeus
ENSLAFG00000015951	SFPQ	52	92.945	ENSMLEG00000035352	-	99	92.945	Mandrillus_leucophaeus
ENSLAFG00000015951	SFPQ	84	66.976	ENSMAMG00000007875	sfpq	66	77.494	Mastacembelus_armatus
ENSLAFG00000015951	SFPQ	70	72.523	ENSMZEG00005026091	sfpq	64	73.303	Maylandia_zebra
ENSLAFG00000015951	SFPQ	60	91.304	ENSMGAG00000004237	SFPQ	100	91.304	Meleagris_gallopavo
ENSLAFG00000015951	SFPQ	72	98.894	ENSMAUG00000006402	Sfpq	97	83.260	Mesocricetus_auratus
ENSLAFG00000015951	SFPQ	100	89.605	ENSMICG00000027265	SFPQ	85	96.694	Microcebus_murinus
ENSLAFG00000015951	SFPQ	71	95.111	ENSMOCG00000019075	Sfpq	99	95.228	Microtus_ochrogaster
ENSLAFG00000015951	SFPQ	88	61.955	ENSMMOG00000001074	sfpq	65	74.419	Mola_mola
ENSLAFG00000015951	SFPQ	71	95.964	ENSMODG00000017937	SFPQ	73	93.673	Monodelphis_domestica
ENSLAFG00000015951	SFPQ	68	73.721	ENSMALG00000010381	sfpq	64	75.325	Monopterus_albus
ENSLAFG00000015951	SFPQ	96	89.676	MGP_CAROLIEiJ_G0026487	Sfpq	97	86.873	Mus_caroli
ENSLAFG00000015951	SFPQ	85	95.142	ENSMUSG00000028820	Sfpq	97	87.001	Mus_musculus
ENSLAFG00000015951	SFPQ	92	92.965	MGP_PahariEiJ_G0028818	Sfpq	97	86.854	Mus_pahari
ENSLAFG00000015951	SFPQ	85	95.142	MGP_SPRETEiJ_G0027466	Sfpq	97	87.001	Mus_spretus
ENSLAFG00000015951	SFPQ	71	96.889	ENSMLUG00000027090	SFPQ	100	96.889	Myotis_lucifugus
ENSLAFG00000015951	SFPQ	75	95.670	ENSNGAG00000000888	Sfpq	69	98.351	Nannospalax_galili
ENSLAFG00000015951	SFPQ	86	60.976	ENSNBRG00000017479	sfpq	64	73.529	Neolamprologus_brichardi
ENSLAFG00000015951	SFPQ	56	99.715	ENSNLEG00000035521	-	100	99.715	Nomascus_leucogenys
ENSLAFG00000015951	SFPQ	75	95.778	ENSMEUG00000014082	SFPQ	64	95.778	Notamacropus_eugenii
ENSLAFG00000015951	SFPQ	78	92.913	ENSOPRG00000013696	SFPQ	69	96.074	Ochotona_princeps
ENSLAFG00000015951	SFPQ	69	87.215	ENSODEG00000005485	SFPQ	86	87.021	Octodon_degus
ENSLAFG00000015951	SFPQ	70	72.973	ENSONIG00000017737	sfpq	63	74.434	Oreochromis_niloticus
ENSLAFG00000015951	SFPQ	56	97.151	ENSOANG00000008789	-	100	97.151	Ornithorhynchus_anatinus
ENSLAFG00000015951	SFPQ	79	89.017	ENSOCUG00000001877	SFPQ	92	94.167	Oryctolagus_cuniculus
ENSLAFG00000015951	SFPQ	95	57.987	ENSORLG00000007459	sfpq	57	71.926	Oryzias_latipes
ENSLAFG00000015951	SFPQ	95	57.870	ENSORLG00020011818	sfpq	57	71.926	Oryzias_latipes_hni
ENSLAFG00000015951	SFPQ	95	57.711	ENSORLG00015002131	sfpq	58	71.264	Oryzias_latipes_hsok
ENSLAFG00000015951	SFPQ	91	58.833	ENSOMEG00000018020	sfpq	56	71.694	Oryzias_melastigma
ENSLAFG00000015951	SFPQ	82	95.274	ENSOGAG00000027710	SFPQ	100	97.732	Otolemur_garnettii
ENSLAFG00000015951	SFPQ	76	99.537	ENSOARG00000019439	SFPQ	80	99.537	Ovis_aries
ENSLAFG00000015951	SFPQ	72	99.779	ENSPPAG00000030078	SFPQ	82	99.353	Pan_paniscus
ENSLAFG00000015951	SFPQ	56	99.432	ENSPPRG00000015478	-	100	99.432	Panthera_pardus
ENSLAFG00000015951	SFPQ	56	99.715	ENSPTIG00000007710	-	100	99.715	Panthera_tigris_altaica
ENSLAFG00000015951	SFPQ	75	88.636	ENSPTRG00000000518	SFPQ	67	93.182	Pan_troglodytes
ENSLAFG00000015951	SFPQ	100	81.560	ENSPANG00000005380	SFPQ	72	99.384	Papio_anubis
ENSLAFG00000015951	SFPQ	83	67.490	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSLAFG00000015951	SFPQ	68	94.896	ENSPSIG00000011494	SFPQ	100	94.896	Pelodiscus_sinensis
ENSLAFG00000015951	SFPQ	67	69.014	ENSPMGG00000023883	sfpq	58	81.115	Periophthalmus_magnuspinnatus
ENSLAFG00000015951	SFPQ	75	97.065	ENSPEMG00000009794	Sfpq	97	98.726	Peromyscus_maniculatus_bairdii
ENSLAFG00000015951	SFPQ	71	96.188	ENSPCIG00000000923	SFPQ	70	93.673	Phascolarctos_cinereus
ENSLAFG00000015951	SFPQ	93	57.071	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSLAFG00000015951	SFPQ	86	57.319	ENSPREG00000008060	sfpq	59	69.444	Poecilia_reticulata
ENSLAFG00000015951	SFPQ	75	94.835	ENSPPYG00000001560	SFPQ	97	89.489	Pongo_abelii
ENSLAFG00000015951	SFPQ	77	98.601	ENSPCAG00000006164	SFPQ	77	98.601	Procavia_capensis
ENSLAFG00000015951	SFPQ	100	89.474	ENSPCOG00000027127	SFPQ	97	87.281	Propithecus_coquereli
ENSLAFG00000015951	SFPQ	96	92.183	ENSPVAG00000001865	SFPQ	97	88.954	Pteropus_vampyrus
ENSLAFG00000015951	SFPQ	70	71.847	ENSPNYG00000007494	sfpq	62	73.303	Pundamilia_nyererei
ENSLAFG00000015951	SFPQ	97	58.070	ENSPNAG00000002128	sfpq	73	73.198	Pygocentrus_nattereri
ENSLAFG00000015951	SFPQ	73	99.134	ENSRNOG00000058461	Sfpq	97	86.115	Rattus_norvegicus
ENSLAFG00000015951	SFPQ	98	72.961	ENSRBIG00000035286	SFPQ	100	99.715	Rhinopithecus_bieti
ENSLAFG00000015951	SFPQ	77	99.779	ENSRROG00000040992	SFPQ	100	99.715	Rhinopithecus_roxellana
ENSLAFG00000015951	SFPQ	56	99.715	ENSSBOG00000024972	-	100	99.715	Saimiri_boliviensis_boliviensis
ENSLAFG00000015951	SFPQ	53	74.777	ENSSBOG00000033925	-	99	73.392	Saimiri_boliviensis_boliviensis
ENSLAFG00000015951	SFPQ	68	91.091	ENSSHAG00000016107	-	97	90.869	Sarcophilus_harrisii
ENSLAFG00000015951	SFPQ	56	91.738	ENSSHAG00000012312	-	100	91.168	Sarcophilus_harrisii
ENSLAFG00000015951	SFPQ	70	75.283	ENSSFOG00015009289	sfpq	79	77.778	Scleropages_formosus
ENSLAFG00000015951	SFPQ	68	76.852	ENSSMAG00000018201	sfpq	66	73.756	Scophthalmus_maximus
ENSLAFG00000015951	SFPQ	86	63.879	ENSSDUG00000008402	sfpq	65	78.060	Seriola_dumerili
ENSLAFG00000015951	SFPQ	86	63.830	ENSSLDG00000018917	sfpq	65	78.060	Seriola_lalandi_dorsalis
ENSLAFG00000015951	SFPQ	58	99.728	ENSSARG00000006409	SFPQ	100	99.728	Sorex_araneus
ENSLAFG00000015951	SFPQ	72	71.058	ENSSPAG00000016550	sfpq	64	74.830	Stegastes_partitus
ENSLAFG00000015951	SFPQ	100	90.147	ENSSSCG00000035690	SFPQ	97	90.147	Sus_scrofa
ENSLAFG00000015951	SFPQ	68	95.128	ENSTGUG00000001722	SFPQ	100	95.128	Taeniopygia_guttata
ENSLAFG00000015951	SFPQ	69	75.172	ENSTRUG00000003783	sfpq	62	75.862	Takifugu_rubripes
ENSLAFG00000015951	SFPQ	69	76.256	ENSTNIG00000011331	sfpq	72	75.799	Tetraodon_nigroviridis
ENSLAFG00000015951	SFPQ	86	82.759	ENSTBEG00000006238	SFPQ	80	77.362	Tupaia_belangeri
ENSLAFG00000015951	SFPQ	96	91.740	ENSTTRG00000013930	SFPQ	97	87.116	Tursiops_truncatus
ENSLAFG00000015951	SFPQ	51	99.545	ENSUAMG00000026758	SFPQ	86	98.413	Ursus_americanus
ENSLAFG00000015951	SFPQ	56	96.866	ENSUMAG00000008056	-	100	96.866	Ursus_maritimus
ENSLAFG00000015951	SFPQ	68	86.937	ENSVPAG00000006960	-	67	89.865	Vicugna_pacos
ENSLAFG00000015951	SFPQ	56	88.604	ENSVVUG00000000874	-	100	88.604	Vulpes_vulpes
ENSLAFG00000015951	SFPQ	72	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis