EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000015983 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 5808 bases
Position: chrscaffold_10:20715398-20721205
Accession: 100672137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000013407	EXOSC1	PF10447.9	3.5e-15	1	1
ENSLAFP00000013407	ECR1_N	PF14382.6	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000015982	EXOSC1-201	588	-	ENSLAFP00000013407	195 (aa)	XP_003409255	G3TG35

Gene Model

Click here to download ENSLAFG00000015983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000015983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000015983	EXOSC1	100	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSLAFG00000015983	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSAMEG00000000129	EXOSC1	100	97.949	Ailuropoda_melanoleuca
ENSLAFG00000015983	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSLAFG00000015983	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSLAFG00000015983	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSLAFG00000015983	EXOSC1	98	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSLAFG00000015983	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSLAFG00000015983	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSLAFG00000015983	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSLAFG00000015983	EXOSC1	98	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSBTAG00000012699	EXOSC1	100	97.436	Bos_taurus
ENSLAFG00000015983	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCAFG00000009068	EXOSC1	94	97.436	Canis_familiaris
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCAFG00020006002	EXOSC1	94	97.436	Canis_lupus_dingo
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCHIG00000015253	EXOSC1	100	97.436	Capra_hircus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCPOG00000001173	EXOSC1	100	97.436	Cavia_porcellus
ENSLAFG00000015983	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSLAFG00000015983	EXOSC1	100	97.949	ENSCLAG00000002463	EXOSC1	100	97.949	Chinchilla_lanigera
ENSLAFG00000015983	EXOSC1	100	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSLAFG00000015983	EXOSC1	96	85.027	ENSCHOG00000006477	EXOSC1	100	85.027	Choloepus_hoffmanni
ENSLAFG00000015983	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSLAFG00000015983	EXOSC1	95	55.080	ENSCING00000022734	-	89	55.080	Ciona_intestinalis
ENSLAFG00000015983	EXOSC1	95	56.684	ENSCSAVG00000010865	-	95	56.684	Ciona_savignyi
ENSLAFG00000015983	EXOSC1	100	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSLAFG00000015983	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSLAFG00000015983	EXOSC1	98	68.063	ENSCSEG00000007895	exosc1	95	68.063	Cynoglossus_semilaevis
ENSLAFG00000015983	EXOSC1	98	76.440	ENSCVAG00000016748	exosc1	98	76.440	Cyprinodon_variegatus
ENSLAFG00000015983	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSLAFG00000015983	EXOSC1	75	97.297	ENSDNOG00000007983	EXOSC1	100	97.297	Dasypus_novemcinctus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSDORG00000016528	Exosc1	100	96.923	Dipodomys_ordii
ENSLAFG00000015983	EXOSC1	94	49.206	FBgn0032346	Csl4	92	49.206	Drosophila_melanogaster
ENSLAFG00000015983	EXOSC1	100	96.923	ENSETEG00000002469	-	100	96.923	Echinops_telfairi
ENSLAFG00000015983	EXOSC1	99	63.265	ENSEBUG00000008164	exosc1	98	63.265	Eptatretus_burgeri
ENSLAFG00000015983	EXOSC1	100	89.231	ENSEASG00005008684	EXOSC1	100	89.231	Equus_asinus_asinus
ENSLAFG00000015983	EXOSC1	61	79.832	ENSECAG00000010621	EXOSC1	71	79.832	Equus_caballus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSLAFG00000015983	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSLAFG00000015983	EXOSC1	100	97.949	ENSFCAG00000040563	EXOSC1	94	97.949	Felis_catus
ENSLAFG00000015983	EXOSC1	100	84.615	ENSFALG00000008450	EXOSC1	100	84.615	Ficedula_albicollis
ENSLAFG00000015983	EXOSC1	100	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSLAFG00000015983	EXOSC1	98	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSLAFG00000015983	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSLAFG00000015983	EXOSC1	100	73.333	ENSGALG00000039917	EXOSC1	100	87.671	Gallus_gallus
ENSLAFG00000015983	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSLAFG00000015983	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSLAFG00000015983	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSLAFG00000015983	EXOSC1	100	84.615	ENSGGOG00000003099	EXOSC1	100	84.615	Gorilla_gorilla
ENSLAFG00000015983	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSLAFG00000015983	EXOSC1	100	98.462	ENSHGLG00000016927	EXOSC1	100	98.462	Heterocephalus_glaber_female
ENSLAFG00000015983	EXOSC1	100	98.462	ENSHGLG00100012208	EXOSC1	100	98.462	Heterocephalus_glaber_male
ENSLAFG00000015983	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSLAFG00000015983	EXOSC1	98	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSSTOG00000006615	EXOSC1	100	97.949	Ictidomys_tridecemlineatus
ENSLAFG00000015983	EXOSC1	63	81.148	ENSSTOG00000029860	-	93	81.148	Ictidomys_tridecemlineatus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSJJAG00000013311	Exosc1	100	96.923	Jaculus_jaculus
ENSLAFG00000015983	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSLAFG00000015983	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSLAFG00000015983	EXOSC1	98	59.596	ENSLOCG00000003776	exosc1	99	59.596	Lepisosteus_oculatus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSLAFG00000015983	EXOSC1	100	96.923	ENSMMUG00000020028	EXOSC1	100	89.950	Macaca_mulatta
ENSLAFG00000015983	EXOSC1	100	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSLAFG00000015983	EXOSC1	100	91.282	ENSMLEG00000027643	EXOSC1	100	91.282	Mandrillus_leucophaeus
ENSLAFG00000015983	EXOSC1	98	80.628	ENSMAMG00000012200	exosc1	98	80.628	Mastacembelus_armatus
ENSLAFG00000015983	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSLAFG00000015983	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSMICG00000007664	EXOSC1	92	97.436	Microcebus_murinus
ENSLAFG00000015983	EXOSC1	97	91.579	ENSMOCG00000017124	-	97	91.579	Microtus_ochrogaster
ENSLAFG00000015983	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSLAFG00000015983	EXOSC1	99	59.278	ENSMMOG00000021403	exosc1	99	59.278	Mola_mola
ENSLAFG00000015983	EXOSC1	100	92.857	ENSMODG00000004213	EXOSC1	100	92.857	Monodelphis_domestica
ENSLAFG00000015983	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSLAFG00000015983	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSLAFG00000015983	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSLAFG00000015983	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSLAFG00000015983	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSMPUG00000017044	EXOSC1	100	97.949	Mustela_putorius_furo
ENSLAFG00000015983	EXOSC1	100	97.436	ENSMLUG00000009228	EXOSC1	100	97.436	Myotis_lucifugus
ENSLAFG00000015983	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSLAFG00000015983	EXOSC1	98	60.733	ENSNBRG00000024007	exosc1	97	60.733	Neolamprologus_brichardi
ENSLAFG00000015983	EXOSC1	100	96.410	ENSNLEG00000013872	EXOSC1	100	96.410	Nomascus_leucogenys
ENSLAFG00000015983	EXOSC1	59	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSLAFG00000015983	EXOSC1	100	95.897	ENSOPRG00000005065	EXOSC1	100	95.897	Ochotona_princeps
ENSLAFG00000015983	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSLAFG00000015983	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSLAFG00000015983	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSLAFG00000015983	EXOSC1	100	96.429	ENSOCUG00000011898	-	100	96.429	Oryctolagus_cuniculus
ENSLAFG00000015983	EXOSC1	100	91.282	ENSOCUG00000026461	-	100	91.282	Oryctolagus_cuniculus
ENSLAFG00000015983	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSLAFG00000015983	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSLAFG00000015983	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSLAFG00000015983	EXOSC1	98	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSLAFG00000015983	EXOSC1	100	96.923	ENSOGAG00000016259	EXOSC1	100	96.923	Otolemur_garnettii
ENSLAFG00000015983	EXOSC1	100	96.923	ENSOARG00000010136	EXOSC1	100	96.923	Ovis_aries
ENSLAFG00000015983	EXOSC1	100	90.863	ENSPPAG00000039842	EXOSC1	100	90.863	Pan_paniscus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSPPRG00000023366	EXOSC1	100	97.949	Panthera_pardus
ENSLAFG00000015983	EXOSC1	100	97.949	ENSPTIG00000017701	EXOSC1	100	97.949	Panthera_tigris_altaica
ENSLAFG00000015983	EXOSC1	100	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSLAFG00000015983	EXOSC1	100	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSLAFG00000015983	EXOSC1	98	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSLAFG00000015983	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSLAFG00000015983	EXOSC1	98	68.063	ENSPMGG00000014002	exosc1	98	68.063	Periophthalmus_magnuspinnatus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSLAFG00000015983	EXOSC1	95	70.588	ENSPMAG00000000195	exosc1	95	70.588	Petromyzon_marinus
ENSLAFG00000015983	EXOSC1	100	93.846	ENSPCIG00000002210	EXOSC1	99	93.846	Phascolarctos_cinereus
ENSLAFG00000015983	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSLAFG00000015983	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSLAFG00000015983	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSLAFG00000015983	EXOSC1	98	65.104	ENSPREG00000000405	exosc1	93	65.104	Poecilia_reticulata
ENSLAFG00000015983	EXOSC1	100	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSLAFG00000015983	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSLAFG00000015983	EXOSC1	100	91.282	ENSPCOG00000027539	EXOSC1	100	91.282	Propithecus_coquereli
ENSLAFG00000015983	EXOSC1	100	97.949	ENSPVAG00000003372	EXOSC1	100	97.949	Pteropus_vampyrus
ENSLAFG00000015983	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSLAFG00000015983	EXOSC1	98	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSLAFG00000015983	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSLAFG00000015983	EXOSC1	100	96.923	ENSRROG00000032589	EXOSC1	92	96.923	Rhinopithecus_roxellana
ENSLAFG00000015983	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSLAFG00000015983	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSLAFG00000015983	EXOSC1	98	82.723	ENSSFOG00015009069	exosc1	98	82.723	Scleropages_formosus
ENSLAFG00000015983	EXOSC1	97	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSLAFG00000015983	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSLAFG00000015983	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSLAFG00000015983	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSLAFG00000015983	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSLAFG00000015983	EXOSC1	99	83.505	ENSSPUG00000012263	EXOSC1	99	83.505	Sphenodon_punctatus
ENSLAFG00000015983	EXOSC1	98	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSLAFG00000015983	EXOSC1	100	96.923	ENSSSCG00000010518	EXOSC1	91	96.923	Sus_scrofa
ENSLAFG00000015983	EXOSC1	98	82.812	ENSTGUG00000009692	EXOSC1	99	82.812	Taeniopygia_guttata
ENSLAFG00000015983	EXOSC1	97	73.016	ENSTRUG00000007706	exosc1	98	73.016	Takifugu_rubripes
ENSLAFG00000015983	EXOSC1	97	72.917	ENSTNIG00000014079	exosc1	97	72.917	Tetraodon_nigroviridis
ENSLAFG00000015983	EXOSC1	100	89.231	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSLAFG00000015983	EXOSC1	94	97.826	ENSTTRG00000009887	EXOSC1	100	97.826	Tursiops_truncatus
ENSLAFG00000015983	EXOSC1	100	82.051	ENSUAMG00000010266	EXOSC1	100	82.051	Ursus_americanus
ENSLAFG00000015983	EXOSC1	100	82.051	ENSUMAG00000022002	EXOSC1	100	82.051	Ursus_maritimus
ENSLAFG00000015983	EXOSC1	100	97.436	ENSVVUG00000023192	EXOSC1	63	97.436	Vulpes_vulpes
ENSLAFG00000015983	EXOSC1	98	79.688	ENSXETG00000003434	exosc1	99	79.688	Xenopus_tropicalis
ENSLAFG00000015983	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSLAFG00000015983	EXOSC1	98	65.625	ENSXMAG00000023382	exosc1	93	65.625	Xiphophorus_maculatus