EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000016137 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 8936 bases
Position: chrscaffold_22:13179022-13187957
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000013546	R3H	PF01424.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000016136	R3HCC1-201	1506	-	ENSLAFP00000013546	501 (aa)	-	G3TGE8

Gene Model

Click here to download ENSLAFG00000016137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000016137's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000016137	R3HCC1	96	72.279	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSLAFG00000016137	R3HCC1	58	43.312	ENSAPOG00000003616	r3hcc1	66	43.312	Acanthochromis_polyacanthus
ENSLAFG00000016137	R3HCC1	99	70.942	ENSAMEG00000002963	R3HCC1	95	71.600	Ailuropoda_melanoleuca
ENSLAFG00000016137	R3HCC1	58	40.441	ENSACIG00000017144	r3hcc1	59	50.575	Amphilophus_citrinellus
ENSLAFG00000016137	R3HCC1	55	47.059	ENSAOCG00000003945	r3hcc1	74	46.203	Amphiprion_ocellaris
ENSLAFG00000016137	R3HCC1	53	47.059	ENSAPEG00000003613	r3hcc1	70	45.570	Amphiprion_percula
ENSLAFG00000016137	R3HCC1	93	45.161	ENSACAG00000016627	R3HCC1	96	45.720	Anolis_carolinensis
ENSLAFG00000016137	R3HCC1	97	74.385	ENSANAG00000036169	R3HCC1	96	74.590	Aotus_nancymaae
ENSLAFG00000016137	R3HCC1	97	68.560	ENSBTAG00000025830	R3HCC1	98	68.763	Bos_taurus
ENSLAFG00000016137	R3HCC1	96	72.074	ENSCJAG00000020118	R3HCC1	99	63.900	Callithrix_jacchus
ENSLAFG00000016137	R3HCC1	96	68.737	ENSCAFG00000009210	R3HCC1	96	66.874	Canis_familiaris
ENSLAFG00000016137	R3HCC1	85	64.884	ENSCAFG00020012870	R3HCC1	91	62.558	Canis_lupus_dingo
ENSLAFG00000016137	R3HCC1	95	69.167	ENSCHIG00000009107	R3HCC1	98	69.375	Capra_hircus
ENSLAFG00000016137	R3HCC1	97	74.538	ENSTSYG00000000511	R3HCC1	78	74.538	Carlito_syrichta
ENSLAFG00000016137	R3HCC1	86	62.989	ENSCAPG00000015813	R3HCC1	99	62.442	Cavia_aperea
ENSLAFG00000016137	R3HCC1	94	69.958	ENSCPOG00000009696	R3HCC1	99	69.053	Cavia_porcellus
ENSLAFG00000016137	R3HCC1	96	73.511	ENSCCAG00000037811	R3HCC1	96	72.475	Cebus_capucinus
ENSLAFG00000016137	R3HCC1	99	72.167	ENSCATG00000032971	R3HCC1	99	65.145	Cercocebus_atys
ENSLAFG00000016137	R3HCC1	95	69.958	ENSCLAG00000015556	R3HCC1	87	69.153	Chinchilla_lanigera
ENSLAFG00000016137	R3HCC1	99	71.769	ENSCSAG00000016250	R3HCC1	96	70.378	Chlorocebus_sabaeus
ENSLAFG00000016137	R3HCC1	96	70.928	ENSCHOG00000000396	R3HCC1	99	69.556	Choloepus_hoffmanni
ENSLAFG00000016137	R3HCC1	99	71.968	ENSCANG00000029441	R3HCC1	96	71.968	Colobus_angolensis_palliatus
ENSLAFG00000016137	R3HCC1	95	61.336	ENSCGRG00001014977	R3hcc1	99	60.400	Cricetulus_griseus_chok1gshd
ENSLAFG00000016137	R3HCC1	95	61.336	ENSCGRG00000004454	R3hcc1	99	60.400	Cricetulus_griseus_crigri
ENSLAFG00000016137	R3HCC1	92	31.027	ENSCSEG00000005748	r3hcc1	78	44.586	Cynoglossus_semilaevis
ENSLAFG00000016137	R3HCC1	57	45.139	ENSDARG00000099593	r3hcc1	72	45.139	Danio_rerio
ENSLAFG00000016137	R3HCC1	97	74.897	ENSDNOG00000007168	R3HCC1	93	74.897	Dasypus_novemcinctus
ENSLAFG00000016137	R3HCC1	95	60.762	ENSDORG00000026365	R3hcc1	99	65.574	Dipodomys_ordii
ENSLAFG00000016137	R3HCC1	99	66.799	ENSETEG00000001147	R3HCC1	100	66.799	Echinops_telfairi
ENSLAFG00000016137	R3HCC1	97	74.187	ENSEASG00005018782	R3HCC1	82	74.187	Equus_asinus_asinus
ENSLAFG00000016137	R3HCC1	97	73.984	ENSECAG00000025013	R3HCC1	97	74.428	Equus_caballus
ENSLAFG00000016137	R3HCC1	98	67.409	ENSEEUG00000011918	R3HCC1	99	67.409	Erinaceus_europaeus
ENSLAFG00000016137	R3HCC1	89	34.348	ENSELUG00000023650	r3hcc1	61	55.405	Esox_lucius
ENSLAFG00000016137	R3HCC1	99	71.888	ENSFCAG00000012395	R3HCC1	97	73.029	Felis_catus
ENSLAFG00000016137	R3HCC1	94	39.038	ENSFALG00000001646	R3HCC1	84	39.065	Ficedula_albicollis
ENSLAFG00000016137	R3HCC1	95	66.598	ENSFDAG00000001572	R3HCC1	99	65.560	Fukomys_damarensis
ENSLAFG00000016137	R3HCC1	55	37.671	ENSGMOG00000017590	-	81	38.462	Gadus_morhua
ENSLAFG00000016137	R3HCC1	59	46.897	ENSGAFG00000008747	-	68	45.342	Gambusia_affinis
ENSLAFG00000016137	R3HCC1	62	46.853	ENSGACG00000008447	r3hcc1	74	46.853	Gasterosteus_aculeatus
ENSLAFG00000016137	R3HCC1	99	72.545	ENSGGOG00000013817	R3HCC1	99	73.013	Gorilla_gorilla
ENSLAFG00000016137	R3HCC1	97	67.149	ENSHGLG00000010517	R3HCC1	95	66.531	Heterocephalus_glaber_female
ENSLAFG00000016137	R3HCC1	96	67.081	ENSHGLG00100006388	R3HCC1	95	66.531	Heterocephalus_glaber_male
ENSLAFG00000016137	R3HCC1	55	48.837	ENSHCOG00000011745	r3hcc1	67	47.794	Hippocampus_comes
ENSLAFG00000016137	R3HCC1	58	49.655	ENSIPUG00000024504	r3hcc1	65	49.655	Ictalurus_punctatus
ENSLAFG00000016137	R3HCC1	76	78.846	ENSSTOG00000027130	R3HCC1	86	78.846	Ictidomys_tridecemlineatus
ENSLAFG00000016137	R3HCC1	95	64.449	ENSJJAG00000013075	R3hcc1	99	64.449	Jaculus_jaculus
ENSLAFG00000016137	R3HCC1	53	45.578	ENSKMAG00000000286	r3hcc1	71	43.671	Kryptolebias_marmoratus
ENSLAFG00000016137	R3HCC1	69	50.968	ENSLACG00000011894	R3HCC1	78	48.428	Latimeria_chalumnae
ENSLAFG00000016137	R3HCC1	93	33.758	ENSLOCG00000015442	r3hcc1	94	33.333	Lepisosteus_oculatus
ENSLAFG00000016137	R3HCC1	99	71.968	ENSMFAG00000032894	R3HCC1	99	64.938	Macaca_fascicularis
ENSLAFG00000016137	R3HCC1	99	71.968	ENSMMUG00000016655	R3HCC1	94	70.577	Macaca_mulatta
ENSLAFG00000016137	R3HCC1	99	71.571	ENSMNEG00000043283	R3HCC1	99	64.523	Macaca_nemestrina
ENSLAFG00000016137	R3HCC1	99	71.769	ENSMLEG00000030147	R3HCC1	96	70.378	Mandrillus_leucophaeus
ENSLAFG00000016137	R3HCC1	89	31.020	ENSMAMG00000018146	r3hcc1	99	30.105	Mastacembelus_armatus
ENSLAFG00000016137	R3HCC1	96	43.725	ENSMGAG00000001356	R3HCC1	93	42.570	Meleagris_gallopavo
ENSLAFG00000016137	R3HCC1	95	61.458	ENSMAUG00000016096	R3hcc1	99	62.733	Mesocricetus_auratus
ENSLAFG00000016137	R3HCC1	96	72.050	ENSMICG00000011146	R3HCC1	95	73.101	Microcebus_murinus
ENSLAFG00000016137	R3HCC1	95	60.446	ENSMOCG00000018508	R3hcc1	99	60.243	Microtus_ochrogaster
ENSLAFG00000016137	R3HCC1	94	45.868	ENSMODG00000016809	-	100	48.571	Monodelphis_domestica
ENSLAFG00000016137	R3HCC1	55	44.910	ENSMALG00000000731	r3hcc1	98	31.151	Monopterus_albus
ENSLAFG00000016137	R3HCC1	95	61.992	MGP_CAROLIEiJ_G0019467	R3hcc1	99	62.602	Mus_caroli
ENSLAFG00000016137	R3HCC1	95	61.382	ENSMUSG00000034194	R3hcc1	99	62.195	Mus_musculus
ENSLAFG00000016137	R3HCC1	95	58.743	MGP_PahariEiJ_G0030484	R3hcc1	99	60.400	Mus_pahari
ENSLAFG00000016137	R3HCC1	95	61.010	MGP_SPRETEiJ_G0020359	R3hcc1	99	59.519	Mus_spretus
ENSLAFG00000016137	R3HCC1	99	70.140	ENSMPUG00000003457	R3HCC1	90	70.140	Mustela_putorius_furo
ENSLAFG00000016137	R3HCC1	99	68.327	ENSMLUG00000000266	R3HCC1	96	67.729	Myotis_lucifugus
ENSLAFG00000016137	R3HCC1	95	65.762	ENSNGAG00000016747	R3hcc1	99	67.850	Nannospalax_galili
ENSLAFG00000016137	R3HCC1	88	71.783	ENSNLEG00000015944	R3HCC1	90	70.933	Nomascus_leucogenys
ENSLAFG00000016137	R3HCC1	95	56.522	ENSMEUG00000010587	R3HCC1	99	56.315	Notamacropus_eugenii
ENSLAFG00000016137	R3HCC1	98	61.538	ENSOPRG00000013390	R3HCC1	98	61.538	Ochotona_princeps
ENSLAFG00000016137	R3HCC1	94	61.462	ENSODEG00000007529	R3HCC1	98	62.130	Octodon_degus
ENSLAFG00000016137	R3HCC1	95	53.292	ENSOANG00000013877	R3HCC1	97	55.670	Ornithorhynchus_anatinus
ENSLAFG00000016137	R3HCC1	95	62.292	ENSOCUG00000023554	R3HCC1	86	63.147	Oryctolagus_cuniculus
ENSLAFG00000016137	R3HCC1	55	42.945	ENSORLG00000016816	r3hcc1	75	42.945	Oryzias_latipes
ENSLAFG00000016137	R3HCC1	62	42.331	ENSORLG00020012005	r3hcc1	85	42.331	Oryzias_latipes_hni
ENSLAFG00000016137	R3HCC1	62	42.945	ENSORLG00015007018	r3hcc1	85	42.945	Oryzias_latipes_hsok
ENSLAFG00000016137	R3HCC1	58	41.104	ENSOMEG00000000816	r3hcc1	78	41.104	Oryzias_melastigma
ENSLAFG00000016137	R3HCC1	97	68.519	ENSOGAG00000001291	R3HCC1	93	68.583	Otolemur_garnettii
ENSLAFG00000016137	R3HCC1	95	69.565	ENSOARG00000010146	R3HCC1	96	69.772	Ovis_aries
ENSLAFG00000016137	R3HCC1	96	72.485	ENSPPAG00000033165	R3HCC1	99	72.407	Pan_paniscus
ENSLAFG00000016137	R3HCC1	95	72.234	ENSPPRG00000002522	R3HCC1	99	72.651	Panthera_pardus
ENSLAFG00000016137	R3HCC1	88	70.270	ENSPTIG00000011230	R3HCC1	95	70.455	Panthera_tigris_altaica
ENSLAFG00000016137	R3HCC1	96	73.101	ENSPTRG00000020076	R3HCC1	96	72.565	Pan_troglodytes
ENSLAFG00000016137	R3HCC1	99	72.167	ENSPANG00000000453	R3HCC1	96	70.974	Papio_anubis
ENSLAFG00000016137	R3HCC1	53	49.315	ENSPKIG00000014426	-	73	49.315	Paramormyrops_kingsleyae
ENSLAFG00000016137	R3HCC1	53	49.315	ENSPKIG00000020397	-	68	49.315	Paramormyrops_kingsleyae
ENSLAFG00000016137	R3HCC1	96	45.509	ENSPSIG00000017664	R3HCC1	100	45.181	Pelodiscus_sinensis
ENSLAFG00000016137	R3HCC1	95	62.218	ENSPEMG00000007118	R3hcc1	99	62.705	Peromyscus_maniculatus_bairdii
ENSLAFG00000016137	R3HCC1	87	50.334	ENSPCIG00000022718	-	83	50.783	Phascolarctos_cinereus
ENSLAFG00000016137	R3HCC1	58	46.099	ENSPFOG00000022301	r3hcc1	64	46.099	Poecilia_formosa
ENSLAFG00000016137	R3HCC1	58	46.099	ENSPLAG00000010794	r3hcc1	64	46.099	Poecilia_latipinna
ENSLAFG00000016137	R3HCC1	58	46.099	ENSPMEG00000022515	r3hcc1	64	46.099	Poecilia_mexicana
ENSLAFG00000016137	R3HCC1	58	46.809	ENSPREG00000000713	r3hcc1	64	46.809	Poecilia_reticulata
ENSLAFG00000016137	R3HCC1	89	70.759	ENSPPYG00000018436	R3HCC1	99	70.759	Pongo_abelii
ENSLAFG00000016137	R3HCC1	69	92.903	ENSPCAG00000012229	R3HCC1	76	92.903	Procavia_capensis
ENSLAFG00000016137	R3HCC1	95	72.083	ENSPCOG00000027554	R3HCC1	99	72.917	Propithecus_coquereli
ENSLAFG00000016137	R3HCC1	97	69.654	ENSPVAG00000009829	R3HCC1	98	69.450	Pteropus_vampyrus
ENSLAFG00000016137	R3HCC1	54	46.617	ENSPNAG00000023875	r3hcc1	71	46.617	Pygocentrus_nattereri
ENSLAFG00000016137	R3HCC1	100	61.905	ENSRNOG00000016777	AABR07018321.1	85	63.198	Rattus_norvegicus
ENSLAFG00000016137	R3HCC1	95	73.029	ENSRBIG00000028045	R3HCC1	99	73.029	Rhinopithecus_bieti
ENSLAFG00000016137	R3HCC1	99	72.565	ENSRROG00000031126	R3HCC1	92	72.565	Rhinopithecus_roxellana
ENSLAFG00000016137	R3HCC1	95	72.407	ENSSBOG00000022590	R3HCC1	99	72.199	Saimiri_boliviensis_boliviensis
ENSLAFG00000016137	R3HCC1	94	49.595	ENSSHAG00000016526	-	64	86.905	Sarcophilus_harrisii
ENSLAFG00000016137	R3HCC1	88	34.091	ENSSFOG00015013507	r3hcc1	98	34.014	Scleropages_formosus
ENSLAFG00000016137	R3HCC1	58	48.062	ENSSDUG00000022786	r3hcc1	76	42.771	Seriola_dumerili
ENSLAFG00000016137	R3HCC1	58	48.062	ENSSLDG00000019031	r3hcc1	76	42.771	Seriola_lalandi_dorsalis
ENSLAFG00000016137	R3HCC1	91	32.083	ENSSPAG00000013497	r3hcc1	98	32.083	Stegastes_partitus
ENSLAFG00000016137	R3HCC1	97	63.730	ENSSSCG00000037347	-	92	65.696	Sus_scrofa
ENSLAFG00000016137	R3HCC1	99	70.400	ENSSSCG00000039915	-	96	70.800	Sus_scrofa
ENSLAFG00000016137	R3HCC1	58	43.382	ENSTRUG00000015880	r3hcc1	73	43.382	Takifugu_rubripes
ENSLAFG00000016137	R3HCC1	98	64.646	ENSTTRG00000012247	R3HCC1	99	64.848	Tursiops_truncatus
ENSLAFG00000016137	R3HCC1	95	70.231	ENSUAMG00000007344	R3HCC1	99	70.440	Ursus_americanus
ENSLAFG00000016137	R3HCC1	96	69.008	ENSVVUG00000005056	R3HCC1	96	67.288	Vulpes_vulpes
ENSLAFG00000016137	R3HCC1	55	45.578	ENSXCOG00000017626	r3hcc1	60	45.578	Xiphophorus_couchianus
ENSLAFG00000016137	R3HCC1	59	45.890	ENSXMAG00000018375	r3hcc1	65	45.890	Xiphophorus_maculatus