EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000016343 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 14929 bases
Position: chrscaffold_28:2332750-2347678
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000013721	La	PF05383.17	1.4e-20	1	1
ENSLAFP00000018488	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000016341	LARP6-201	1344	-	ENSLAFP00000013721	447 (aa)	-	G3TGU1
ENSLAFT00000035706	LARP6-202	1344	-	ENSLAFP00000018488	447 (aa)	-	G3TSD0

Gene Model

Click here to download ENSLAFG00000016343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000016343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000016343	LARP6	100	93.065	ENSG00000166173	LARP6	100	96.774	Homo_sapiens
ENSLAFG00000016343	LARP6	96	59.775	ENSAPOG00000021773	larp6a	63	59.775	Acanthochromis_polyacanthus
ENSLAFG00000016343	LARP6	95	91.017	ENSAMEG00000008897	LARP6	99	91.017	Ailuropoda_melanoleuca
ENSLAFG00000016343	LARP6	96	60.449	ENSACIG00000005166	larp6a	86	59.551	Amphilophus_citrinellus
ENSLAFG00000016343	LARP6	96	59.775	ENSAOCG00000002284	larp6a	63	59.775	Amphiprion_ocellaris
ENSLAFG00000016343	LARP6	96	59.775	ENSAPEG00000008077	larp6a	84	59.775	Amphiprion_percula
ENSLAFG00000016343	LARP6	96	59.775	ENSATEG00000004018	larp6a	62	59.101	Anabas_testudineus
ENSLAFG00000016343	LARP6	94	72.104	ENSAPLG00000009914	LARP6	99	72.104	Anas_platyrhynchos
ENSLAFG00000016343	LARP6	92	67.548	ENSACAG00000008613	LARP6	98	67.548	Anolis_carolinensis
ENSLAFG00000016343	LARP6	100	93.065	ENSANAG00000024860	LARP6	91	93.065	Aotus_nancymaae
ENSLAFG00000016343	LARP6	96	60.225	ENSACLG00000018561	larp6a	61	59.326	Astatotilapia_calliptera
ENSLAFG00000016343	LARP6	98	58.515	ENSAMXG00000029387	larp6a	67	59.341	Astyanax_mexicanus
ENSLAFG00000016343	LARP6	91	42.067	ENSAMXG00000036816	-	93	41.162	Astyanax_mexicanus
ENSLAFG00000016343	LARP6	100	90.604	ENSBTAG00000003915	LARP6	91	90.604	Bos_taurus
ENSLAFG00000016343	LARP6	100	93.065	ENSCJAG00000018642	-	91	93.065	Callithrix_jacchus
ENSLAFG00000016343	LARP6	100	92.841	ENSCJAG00000046236	-	91	92.841	Callithrix_jacchus
ENSLAFG00000016343	LARP6	95	92.199	ENSCAFG00000017616	LARP6	99	92.199	Canis_familiaris
ENSLAFG00000016343	LARP6	99	91.461	ENSCAFG00020007296	LARP6	91	91.499	Canis_lupus_dingo
ENSLAFG00000016343	LARP6	100	90.380	ENSCHIG00000013742	LARP6	91	90.380	Capra_hircus
ENSLAFG00000016343	LARP6	95	91.726	ENSTSYG00000028124	LARP6	86	91.726	Carlito_syrichta
ENSLAFG00000016343	LARP6	95	91.489	ENSCAPG00000015452	LARP6	100	91.294	Cavia_aperea
ENSLAFG00000016343	LARP6	100	90.828	ENSCPOG00000022687	LARP6	91	90.828	Cavia_porcellus
ENSLAFG00000016343	LARP6	100	93.512	ENSCCAG00000036320	LARP6	91	93.512	Cebus_capucinus
ENSLAFG00000016343	LARP6	100	92.841	ENSCATG00000042432	LARP6	91	92.841	Cercocebus_atys
ENSLAFG00000016343	LARP6	100	93.512	ENSCLAG00000007893	LARP6	91	93.512	Chinchilla_lanigera
ENSLAFG00000016343	LARP6	100	93.289	ENSCSAG00000013672	LARP6	91	93.289	Chlorocebus_sabaeus
ENSLAFG00000016343	LARP6	100	91.499	ENSCHOG00000003318	LARP6	94	91.499	Choloepus_hoffmanni
ENSLAFG00000016343	LARP6	98	71.167	ENSCPBG00000010771	LARP6	84	71.167	Chrysemys_picta_bellii
ENSLAFG00000016343	LARP6	95	93.853	ENSCANG00000025833	LARP6	99	93.853	Colobus_angolensis_palliatus
ENSLAFG00000016343	LARP6	99	91.461	ENSCGRG00001024472	Larp6	90	91.461	Cricetulus_griseus_chok1gshd
ENSLAFG00000016343	LARP6	99	91.461	ENSCGRG00000004527	Larp6	90	91.461	Cricetulus_griseus_crigri
ENSLAFG00000016343	LARP6	96	60.360	ENSCSEG00000011196	larp6a	65	59.685	Cynoglossus_semilaevis
ENSLAFG00000016343	LARP6	96	59.417	ENSCVAG00000009605	larp6a	65	59.417	Cyprinodon_variegatus
ENSLAFG00000016343	LARP6	96	60.771	ENSDARG00000005355	larp6a	96	61.939	Danio_rerio
ENSLAFG00000016343	LARP6	99	92.152	ENSDNOG00000042993	LARP6	91	92.152	Dasypus_novemcinctus
ENSLAFG00000016343	LARP6	99	80.804	ENSDORG00000023910	Larp6	91	80.804	Dipodomys_ordii
ENSLAFG00000016343	LARP6	77	92.000	ENSETEG00000020390	LARP6	69	91.705	Echinops_telfairi
ENSLAFG00000016343	LARP6	100	93.736	ENSEASG00005005490	LARP6	66	93.736	Equus_asinus_asinus
ENSLAFG00000016343	LARP6	100	93.736	ENSECAG00000014190	LARP6	97	91.818	Equus_caballus
ENSLAFG00000016343	LARP6	96	59.284	ENSELUG00000007341	larp6a	64	58.837	Esox_lucius
ENSLAFG00000016343	LARP6	100	91.723	ENSFCAG00000001361	LARP6	91	91.723	Felis_catus
ENSLAFG00000016343	LARP6	97	69.318	ENSFALG00000012389	LARP6	93	69.318	Ficedula_albicollis
ENSLAFG00000016343	LARP6	98	90.909	ENSFDAG00000019994	LARP6	86	90.909	Fukomys_damarensis
ENSLAFG00000016343	LARP6	96	59.417	ENSFHEG00000010312	larp6a	63	58.744	Fundulus_heteroclitus
ENSLAFG00000016343	LARP6	98	70.975	ENSGALG00000004046	LARP6	89	70.975	Gallus_gallus
ENSLAFG00000016343	LARP6	96	59.417	ENSGAFG00000009426	larp6a	65	59.417	Gambusia_affinis
ENSLAFG00000016343	LARP6	93	60.277	ENSGACG00000014622	larp6a	96	59.353	Gasterosteus_aculeatus
ENSLAFG00000016343	LARP6	89	70.960	ENSGAGG00000010802	LARP6	58	70.960	Gopherus_agassizii
ENSLAFG00000016343	LARP6	95	93.853	ENSGGOG00000024151	LARP6	99	93.853	Gorilla_gorilla
ENSLAFG00000016343	LARP6	96	60.225	ENSHBUG00000021014	larp6a	61	59.326	Haplochromis_burtoni
ENSLAFG00000016343	LARP6	100	91.759	ENSHGLG00000015112	LARP6	91	91.759	Heterocephalus_glaber_female
ENSLAFG00000016343	LARP6	95	93.381	ENSHGLG00100013159	LARP6	99	93.381	Heterocephalus_glaber_male
ENSLAFG00000016343	LARP6	96	58.108	ENSHCOG00000001241	larp6a	84	58.333	Hippocampus_comes
ENSLAFG00000016343	LARP6	92	59.815	ENSIPUG00000010187	larp6	65	60.606	Ictalurus_punctatus
ENSLAFG00000016343	LARP6	95	39.675	ENSIPUG00000002828	-	96	36.638	Ictalurus_punctatus
ENSLAFG00000016343	LARP6	99	92.825	ENSSTOG00000024279	LARP6	97	92.825	Ictidomys_tridecemlineatus
ENSLAFG00000016343	LARP6	99	90.359	ENSJJAG00000011013	Larp6	92	90.359	Jaculus_jaculus
ENSLAFG00000016343	LARP6	96	60.403	ENSKMAG00000001702	larp6a	60	59.508	Kryptolebias_marmoratus
ENSLAFG00000016343	LARP6	96	57.718	ENSLBEG00000000170	larp6a	84	57.718	Labrus_bergylta
ENSLAFG00000016343	LARP6	99	67.416	ENSLACG00000018706	LARP6	86	67.416	Latimeria_chalumnae
ENSLAFG00000016343	LARP6	93	40.281	ENSLACG00000002786	-	98	42.925	Latimeria_chalumnae
ENSLAFG00000016343	LARP6	98	42.795	ENSLOCG00000008547	-	88	40.611	Lepisosteus_oculatus
ENSLAFG00000016343	LARP6	96	61.765	ENSLOCG00000014592	larp6a	65	62.443	Lepisosteus_oculatus
ENSLAFG00000016343	LARP6	100	93.065	ENSMFAG00000035507	LARP6	99	93.065	Macaca_fascicularis
ENSLAFG00000016343	LARP6	100	93.065	ENSMMUG00000004429	LARP6	93	93.065	Macaca_mulatta
ENSLAFG00000016343	LARP6	100	93.065	ENSMNEG00000045335	LARP6	91	93.065	Macaca_nemestrina
ENSLAFG00000016343	LARP6	95	93.853	ENSMLEG00000038587	LARP6	99	93.853	Mandrillus_leucophaeus
ENSLAFG00000016343	LARP6	96	59.955	ENSMAMG00000005261	larp6a	62	59.284	Mastacembelus_armatus
ENSLAFG00000016343	LARP6	96	60.225	ENSMZEG00005005774	larp6a	61	59.326	Maylandia_zebra
ENSLAFG00000016343	LARP6	94	72.038	ENSMGAG00000005077	LARP6	99	72.038	Meleagris_gallopavo
ENSLAFG00000016343	LARP6	99	90.787	ENSMAUG00000018486	Larp6	90	90.787	Mesocricetus_auratus
ENSLAFG00000016343	LARP6	99	92.568	ENSMICG00000011234	LARP6	91	92.170	Microcebus_murinus
ENSLAFG00000016343	LARP6	100	90.604	ENSMOCG00000010492	Larp6	91	90.604	Microtus_ochrogaster
ENSLAFG00000016343	LARP6	96	60.586	ENSMMOG00000016284	larp6a	85	59.685	Mola_mola
ENSLAFG00000016343	LARP6	99	77.578	ENSMODG00000009034	LARP6	87	77.578	Monodelphis_domestica
ENSLAFG00000016343	LARP6	96	59.641	ENSMALG00000014439	larp6a	84	59.193	Monopterus_albus
ENSLAFG00000016343	LARP6	100	91.275	MGP_CAROLIEiJ_G0032314	Larp6	91	91.275	Mus_caroli
ENSLAFG00000016343	LARP6	100	91.051	ENSMUSG00000034839	Larp6	91	91.051	Mus_musculus
ENSLAFG00000016343	LARP6	100	90.157	MGP_PahariEiJ_G0015180	Larp6	91	90.157	Mus_pahari
ENSLAFG00000016343	LARP6	100	90.828	MGP_SPRETEiJ_G0033452	Larp6	91	90.828	Mus_spretus
ENSLAFG00000016343	LARP6	95	90.307	ENSMPUG00000017086	LARP6	100	89.486	Mustela_putorius_furo
ENSLAFG00000016343	LARP6	100	92.170	ENSMLUG00000010319	LARP6	91	92.170	Myotis_lucifugus
ENSLAFG00000016343	LARP6	100	90.157	ENSNGAG00000014238	Larp6	91	90.157	Nannospalax_galili
ENSLAFG00000016343	LARP6	96	60.225	ENSNBRG00000008120	larp6a	84	59.775	Neolamprologus_brichardi
ENSLAFG00000016343	LARP6	100	93.065	ENSNLEG00000013691	LARP6	91	93.065	Nomascus_leucogenys
ENSLAFG00000016343	LARP6	84	78.797	ENSMEUG00000002270	LARP6	90	67.713	Notamacropus_eugenii
ENSLAFG00000016343	LARP6	79	77.778	ENSOPRG00000004868	-	99	77.778	Ochotona_princeps
ENSLAFG00000016343	LARP6	99	89.238	ENSODEG00000015958	LARP6	90	89.238	Octodon_degus
ENSLAFG00000016343	LARP6	96	59.955	ENSONIG00000002901	larp6a	84	59.508	Oreochromis_niloticus
ENSLAFG00000016343	LARP6	95	80.851	ENSOCUG00000009306	LARP6	100	80.706	Oryctolagus_cuniculus
ENSLAFG00000016343	LARP6	96	60.586	ENSORLG00000014256	larp6a	86	60.449	Oryzias_latipes
ENSLAFG00000016343	LARP6	96	60.586	ENSORLG00020019657	larp6a	63	60.586	Oryzias_latipes_hni
ENSLAFG00000016343	LARP6	96	60.586	ENSORLG00015017915	larp6a	63	60.586	Oryzias_latipes_hsok
ENSLAFG00000016343	LARP6	96	61.036	ENSOMEG00000017049	larp6a	63	61.036	Oryzias_melastigma
ENSLAFG00000016343	LARP6	100	91.051	ENSOGAG00000000522	LARP6	91	91.051	Otolemur_garnettii
ENSLAFG00000016343	LARP6	95	91.017	ENSOARG00000018750	LARP6	98	91.017	Ovis_aries
ENSLAFG00000016343	LARP6	95	93.853	ENSPPAG00000031247	LARP6	99	93.853	Pan_paniscus
ENSLAFG00000016343	LARP6	100	91.051	ENSPPRG00000011282	LARP6	91	91.051	Panthera_pardus
ENSLAFG00000016343	LARP6	95	91.962	ENSPTIG00000015318	LARP6	86	91.962	Panthera_tigris_altaica
ENSLAFG00000016343	LARP6	100	93.065	ENSPTRG00000007234	LARP6	91	93.065	Pan_troglodytes
ENSLAFG00000016343	LARP6	100	93.065	ENSPANG00000016362	LARP6	91	93.065	Papio_anubis
ENSLAFG00000016343	LARP6	99	57.996	ENSPKIG00000004511	LARP6	67	58.913	Paramormyrops_kingsleyae
ENSLAFG00000016343	LARP6	98	59.955	ENSPKIG00000020103	larp6a	84	59.508	Paramormyrops_kingsleyae
ENSLAFG00000016343	LARP6	68	84.615	ENSPSIG00000009071	LARP6	91	78.261	Pelodiscus_sinensis
ENSLAFG00000016343	LARP6	96	60.899	ENSPMGG00000006958	larp6a	86	60.000	Periophthalmus_magnuspinnatus
ENSLAFG00000016343	LARP6	99	90.787	ENSPEMG00000012909	Larp6	90	90.787	Peromyscus_maniculatus_bairdii
ENSLAFG00000016343	LARP6	99	78.924	ENSPCIG00000020765	LARP6	87	78.924	Phascolarctos_cinereus
ENSLAFG00000016343	LARP6	96	60.045	ENSPFOG00000014175	larp6a	84	60.045	Poecilia_formosa
ENSLAFG00000016343	LARP6	96	60.314	ENSPLAG00000011105	larp6a	62	60.314	Poecilia_latipinna
ENSLAFG00000016343	LARP6	96	60.090	ENSPMEG00000011085	larp6a	63	60.090	Poecilia_mexicana
ENSLAFG00000016343	LARP6	96	59.865	ENSPREG00000008067	larp6a	63	59.865	Poecilia_reticulata
ENSLAFG00000016343	LARP6	99	93.049	ENSPPYG00000006604	LARP6	91	93.049	Pongo_abelii
ENSLAFG00000016343	LARP6	71	93.939	ENSPCAG00000014197	LARP6	76	93.939	Procavia_capensis
ENSLAFG00000016343	LARP6	100	91.499	ENSPCOG00000022934	LARP6	91	91.499	Propithecus_coquereli
ENSLAFG00000016343	LARP6	100	93.065	ENSPVAG00000005618	LARP6	91	93.065	Pteropus_vampyrus
ENSLAFG00000016343	LARP6	96	60.225	ENSPNYG00000009835	larp6a	84	59.326	Pundamilia_nyererei
ENSLAFG00000016343	LARP6	96	58.166	ENSPNAG00000017966	larp6a	72	59.060	Pygocentrus_nattereri
ENSLAFG00000016343	LARP6	99	90.135	ENSRNOG00000012438	Larp6	91	90.135	Rattus_norvegicus
ENSLAFG00000016343	LARP6	98	92.890	ENSRBIG00000032902	LARP6	90	92.890	Rhinopithecus_bieti
ENSLAFG00000016343	LARP6	100	92.841	ENSRROG00000043074	LARP6	91	92.841	Rhinopithecus_roxellana
ENSLAFG00000016343	LARP6	95	94.090	ENSSBOG00000024190	LARP6	99	94.090	Saimiri_boliviensis_boliviensis
ENSLAFG00000016343	LARP6	96	75.234	ENSSHAG00000018495	LARP6	100	75.234	Sarcophilus_harrisii
ENSLAFG00000016343	LARP6	96	54.233	ENSSFOG00015002254	LARP6	83	55.378	Scleropages_formosus
ENSLAFG00000016343	LARP6	93	61.124	ENSSFOG00015023268	larp6a	82	62.061	Scleropages_formosus
ENSLAFG00000016343	LARP6	96	60.135	ENSSMAG00000009953	larp6a	62	59.459	Scophthalmus_maximus
ENSLAFG00000016343	LARP6	96	60.538	ENSSDUG00000007438	larp6a	62	59.865	Seriola_dumerili
ENSLAFG00000016343	LARP6	96	60.538	ENSSLDG00000016647	larp6a	62	59.865	Seriola_lalandi_dorsalis
ENSLAFG00000016343	LARP6	94	71.327	ENSSPUG00000011312	LARP6	99	71.327	Sphenodon_punctatus
ENSLAFG00000016343	LARP6	96	59.775	ENSSPAG00000020502	larp6a	62	59.775	Stegastes_partitus
ENSLAFG00000016343	LARP6	100	92.170	ENSSSCG00000004974	LARP6	91	92.170	Sus_scrofa
ENSLAFG00000016343	LARP6	94	71.327	ENSTGUG00000005808	LARP6	99	71.327	Taeniopygia_guttata
ENSLAFG00000016343	LARP6	96	59.598	ENSTRUG00000003151	larp6a	65	59.152	Takifugu_rubripes
ENSLAFG00000016343	LARP6	98	57.753	ENSTNIG00000011926	larp6a	88	58.145	Tetraodon_nigroviridis
ENSLAFG00000016343	LARP6	95	90.330	ENSTBEG00000015077	LARP6	99	90.330	Tupaia_belangeri
ENSLAFG00000016343	LARP6	96	89.019	ENSUAMG00000010467	LARP6	87	88.837	Ursus_americanus
ENSLAFG00000016343	LARP6	95	91.549	ENSVVUG00000015227	LARP6	95	91.549	Vulpes_vulpes
ENSLAFG00000016343	LARP6	97	69.108	ENSXETG00000020340	larp6	88	69.794	Xenopus_tropicalis
ENSLAFG00000016343	LARP6	96	59.641	ENSXCOG00000012654	larp6a	89	59.641	Xiphophorus_couchianus
ENSLAFG00000016343	LARP6	96	59.641	ENSXMAG00000021015	larp6a	60	59.641	Xiphophorus_maculatus