EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000016623 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
20280 bases
Position
chrscaffold_49:3830267-3850546
Accession
100661462
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000019540Fox-1_CPF12414.89.2e-4611
ENSLAFP00000013957Fox-1_CPF12414.85.9e-4211
ENSLAFP00000013957RRM_1PF00076.226.1e-1911
ENSLAFP00000019540RRM_1PF00076.226.6e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000035600RBFOX3-2011188-ENSLAFP00000019540395 (aa)-G3TVD2
ENSLAFT00000016626RBFOX3-2021119-ENSLAFP00000013957373 (aa)XP_023412606G3THD0
Gene Model
Click here to download ENSLAFG00000016623's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000016623's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000016623RBFOX37773.633ENSLAFG00000011480RBFOX110073.633
ENSLAFG00000016623RBFOX39857.985ENSLAFG00000027140RBFOX210057.353
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000016623RBFOX39696.111ENSG00000167281RBFOX310096.111Homo_sapiens
ENSLAFG00000016623RBFOX310072.000ENSAPOG00000021630rbfox3b8973.876Acanthochromis_polyacanthus
ENSLAFG00000016623RBFOX37789.583ENSAPOG00000015658-8962.242Acanthochromis_polyacanthus
ENSLAFG00000016623RBFOX39985.859ENSAMEG00000014170RBFOX39884.343Ailuropoda_melanoleuca
ENSLAFG00000016623RBFOX38767.052ENSACIG00000003768-9267.052Amphilophus_citrinellus
ENSLAFG00000016623RBFOX38181.818ENSACIG00000010817rbfox3b8690.625Amphilophus_citrinellus
ENSLAFG00000016623RBFOX39671.468ENSAOCG00000012358rbfox3b8973.876Amphiprion_ocellaris
ENSLAFG00000016623RBFOX37786.538ENSAOCG00000010786-8770.360Amphiprion_ocellaris
ENSLAFG00000016623RBFOX37879.839ENSAPEG00000019081rbfox3b7490.625Amphiprion_percula
ENSLAFG00000016623RBFOX37689.583ENSAPEG00000015891-8670.752Amphiprion_percula
ENSLAFG00000016623RBFOX39366.667ENSATEG00000023101-9369.578Anabas_testudineus
ENSLAFG00000016623RBFOX39772.329ENSATEG00000019945rbfox3b9669.774Anabas_testudineus
ENSLAFG00000016623RBFOX39679.224ENSACAG00000016093RBFOX39181.972Anolis_carolinensis
ENSLAFG00000016623RBFOX39486.080ENSANAG00000023457RBFOX39784.639Aotus_nancymaae
ENSLAFG00000016623RBFOX39670.994ENSACLG00000025552-8974.157Astatotilapia_calliptera
ENSLAFG00000016623RBFOX310072.000ENSACLG00000020011rbfox3b9572.948Astatotilapia_calliptera
ENSLAFG00000016623RBFOX39176.374ENSAMXG00000037246rbfox3a9877.654Astyanax_mexicanus
ENSLAFG00000016623RBFOX39666.851ENSAMXG00000042841rbfox3b9367.978Astyanax_mexicanus
ENSLAFG00000016623RBFOX39486.610ENSBTAG00000006280RBFOX39784.900Bos_taurus
ENSLAFG00000016623RBFOX39294.783ENSCJAG00000009563RBFOX39693.043Callithrix_jacchus
ENSLAFG00000016623RBFOX37781.494ENSCAFG00000005547RBFOX310081.494Canis_familiaris
ENSLAFG00000016623RBFOX310096.257ENSCAFG00020008126RBFOX310096.257Canis_lupus_dingo
ENSLAFG00000016623RBFOX39893.425ENSCHIG00000009124RBFOX39893.425Capra_hircus
ENSLAFG00000016623RBFOX39696.944ENSTSYG00000029617RBFOX310096.944Carlito_syrichta
ENSLAFG00000016623RBFOX39895.095ENSCPOG00000021703RBFOX310095.304Cavia_porcellus
ENSLAFG00000016623RBFOX39486.325ENSCCAG00000028450RBFOX39784.639Cebus_capucinus
ENSLAFG00000016623RBFOX39290.462ENSCATG00000018349RBFOX39785.542Cercocebus_atys
ENSLAFG00000016623RBFOX310096.257ENSCLAG00000006449RBFOX310096.389Chinchilla_lanigera
ENSLAFG00000016623RBFOX39684.123ENSCSAG00000002355RBFOX310084.123Chlorocebus_sabaeus
ENSLAFG00000016623RBFOX39977.692ENSCPBG00000010904RBFOX39981.921Chrysemys_picta_bellii
ENSLAFG00000016623RBFOX310096.524ENSCANG00000043120RBFOX310096.524Colobus_angolensis_palliatus
ENSLAFG00000016623RBFOX39892.350ENSCGRG00001019476Rbfox39892.898Cricetulus_griseus_chok1gshd
ENSLAFG00000016623RBFOX39892.350ENSCGRG00000003268Rbfox39892.898Cricetulus_griseus_crigri
ENSLAFG00000016623RBFOX39957.029ENSCSEG00000020606RBFOX38361.270Cynoglossus_semilaevis
ENSLAFG00000016623RBFOX38188.000ENSCSEG00000015567RBFOX39770.769Cynoglossus_semilaevis
ENSLAFG00000016623RBFOX39671.468ENSCVAG00000006882rbfox3b8973.743Cyprinodon_variegatus
ENSLAFG00000016623RBFOX310059.358ENSDARG00000074310rbfox3b9768.293Danio_rerio
ENSLAFG00000016623RBFOX39076.177ENSDARG00000010083rbfox3a9973.224Danio_rerio
ENSLAFG00000016623RBFOX38781.707ENSDNOG00000039391RBFOX39078.466Dasypus_novemcinctus
ENSLAFG00000016623RBFOX39683.799ENSDORG00000005352Rbfox39682.123Dipodomys_ordii
ENSLAFG00000016623RBFOX310063.402ENSEBUG00000002129RBFOX39962.469Eptatretus_burgeri
ENSLAFG00000016623RBFOX38353.271ENSEBUG00000013559RBFOX37157.042Eptatretus_burgeri
ENSLAFG00000016623RBFOX39684.167ENSEASG00005005059RBFOX310084.167Equus_asinus_asinus
ENSLAFG00000016623RBFOX39281.159ENSECAG00000023811RBFOX39585.933Equus_caballus
ENSLAFG00000016623RBFOX39881.319ENSEEUG00000013974RBFOX39881.319Erinaceus_europaeus
ENSLAFG00000016623RBFOX310071.543ENSELUG00000017963rbfox3b8972.346Esox_lucius
ENSLAFG00000016623RBFOX35163.158ENSELUG00000009807-5067.059Esox_lucius
ENSLAFG00000016623RBFOX39880.769ENSFCAG00000002555RBFOX39784.337Felis_catus
ENSLAFG00000016623RBFOX39869.363ENSFALG00000012288RBFOX39870.647Ficedula_albicollis
ENSLAFG00000016623RBFOX39890.463ENSFDAG00000007489RBFOX39789.373Fukomys_damarensis
ENSLAFG00000016623RBFOX39662.881ENSFHEG00000008550rbfox3b9564.134Fundulus_heteroclitus
ENSLAFG00000016623RBFOX310063.492ENSGMOG00000019304-9966.767Gadus_morhua
ENSLAFG00000016623RBFOX39182.961ENSGALG00000032889RBFOX39183.853Gallus_gallus
ENSLAFG00000016623RBFOX39469.972ENSGAFG00000005025rbfox3b7590.625Gambusia_affinis
ENSLAFG00000016623RBFOX39673.901ENSGACG00000002138-9673.901Gasterosteus_aculeatus
ENSLAFG00000016623RBFOX39977.949ENSGAGG00000020025RBFOX39977.436Gopherus_agassizii
ENSLAFG00000016623RBFOX310096.257ENSGGOG00000012546RBFOX310096.257Gorilla_gorilla
ENSLAFG00000016623RBFOX310071.467ENSHBUG00000018099rbfox3b8973.464Haplochromis_burtoni
ENSLAFG00000016623RBFOX310071.011ENSHBUG00000023098-9869.543Haplochromis_burtoni
ENSLAFG00000016623RBFOX39894.309ENSHGLG00000008679RBFOX39893.239Heterocephalus_glaber_female
ENSLAFG00000016623RBFOX39890.244ENSHGLG00100014739RBFOX39888.618Heterocephalus_glaber_male
ENSLAFG00000016623RBFOX37687.234ENSHCOG00000001863RBFOX38184.375Hippocampus_comes
ENSLAFG00000016623RBFOX39466.097ENSHCOG00000007444RBFOX37770.031Hippocampus_comes
ENSLAFG00000016623RBFOX39763.989ENSIPUG00000021966rbfox3b9867.698Ictalurus_punctatus
ENSLAFG00000016623RBFOX39971.285ENSIPUG00000012010rbfox3a9871.858Ictalurus_punctatus
ENSLAFG00000016623RBFOX39875.824ENSSTOG00000026817RBFOX39794.536Ictidomys_tridecemlineatus
ENSLAFG00000016623RBFOX39895.342ENSJJAG00000014167Rbfox310095.833Jaculus_jaculus
ENSLAFG00000016623RBFOX39671.468ENSKMAG00000006726rbfox3b8973.876Kryptolebias_marmoratus
ENSLAFG00000016623RBFOX310071.733ENSLBEG00000004030rbfox3b8687.500Labrus_bergylta
ENSLAFG00000016623RBFOX39075.419ENSLBEG00000022508-9174.328Labrus_bergylta
ENSLAFG00000016623RBFOX39876.904ENSLACG00000018409-10076.904Latimeria_chalumnae
ENSLAFG00000016623RBFOX39975.248ENSLOCG00000012267rbfox3a9881.127Lepisosteus_oculatus
ENSLAFG00000016623RBFOX39696.111ENSMFAG00000002247RBFOX310096.111Macaca_fascicularis
ENSLAFG00000016623RBFOX39687.778ENSMMUG00000023028RBFOX310087.778Macaca_mulatta
ENSLAFG00000016623RBFOX39890.959ENSMNEG00000041147RBFOX39790.411Macaca_nemestrina
ENSLAFG00000016623RBFOX39290.462ENSMLEG00000025686RBFOX39785.542Mandrillus_leucophaeus
ENSLAFG00000016623RBFOX39968.448ENSMAMG00000020600-10068.448Mastacembelus_armatus
ENSLAFG00000016623RBFOX38181.673ENSMAMG00000019810rbfox3b8690.625Mastacembelus_armatus
ENSLAFG00000016623RBFOX310071.467ENSMZEG00005000781rbfox3b8973.596Maylandia_zebra
ENSLAFG00000016623RBFOX38362.575ENSMZEG00005003055-5490.323Maylandia_zebra
ENSLAFG00000016623RBFOX36085.356ENSMGAG00000005600RBFOX39185.774Meleagris_gallopavo
ENSLAFG00000016623RBFOX39693.611ENSMAUG00000013543Rbfox39693.642Mesocricetus_auratus
ENSLAFG00000016623RBFOX310094.920ENSMICG00000014898RBFOX310094.920Microcebus_murinus
ENSLAFG00000016623RBFOX39894.521ENSMOCG00000015373Rbfox39894.587Microtus_ochrogaster
ENSLAFG00000016623RBFOX39868.090ENSMMOG00000020193rbfox3b9868.090Mola_mola
ENSLAFG00000016623RBFOX38982.720ENSMODG00000002089RBFOX39083.003Monodelphis_domestica
ENSLAFG00000016623RBFOX310071.809ENSMALG00000018270-8986.275Monopterus_albus
ENSLAFG00000016623RBFOX39670.637ENSMALG00000020407rbfox3b8973.034Monopterus_albus
ENSLAFG00000016623RBFOX39895.068MGP_CAROLIEiJ_G0017487Rbfox310096.552Mus_caroli
ENSLAFG00000016623RBFOX39894.795ENSMUSG00000025576Rbfox310096.552Mus_musculus
ENSLAFG00000016623RBFOX39695.568MGP_PahariEiJ_G0018614Rbfox310097.241Mus_pahari
ENSLAFG00000016623RBFOX39895.342MGP_SPRETEiJ_G0018331Rbfox310096.552Mus_spretus
ENSLAFG00000016623RBFOX39881.910ENSMPUG00000012319RBFOX39880.402Mustela_putorius_furo
ENSLAFG00000016623RBFOX39895.616ENSNGAG00000018006Rbfox39895.726Nannospalax_galili
ENSLAFG00000016623RBFOX39670.360ENSNBRG00000010102rbfox3b7590.000Neolamprologus_brichardi
ENSLAFG00000016623RBFOX37690.909ENSNBRG00000022885-7890.625Neolamprologus_brichardi
ENSLAFG00000016623RBFOX35989.286ENSNLEG00000000153-8192.391Nomascus_leucogenys
ENSLAFG00000016623RBFOX38085.417ENSMEUG00000004218-7589.655Notamacropus_eugenii
ENSLAFG00000016623RBFOX37393.684ENSOPRG00000016279-7993.684Ochotona_princeps
ENSLAFG00000016623RBFOX310096.257ENSODEG00000009433RBFOX310096.257Octodon_degus
ENSLAFG00000016623RBFOX310077.513ENSONIG00000009549rbfox3b9675.482Oreochromis_niloticus
ENSLAFG00000016623RBFOX39671.547ENSONIG00000007282-9775.346Oreochromis_niloticus
ENSLAFG00000016623RBFOX37679.720ENSOCUG00000014217RBFOX37879.371Oryctolagus_cuniculus
ENSLAFG00000016623RBFOX310072.340ENSORLG00000000905rbfox3b7073.389Oryzias_latipes
ENSLAFG00000016623RBFOX310072.340ENSORLG00020018030rbfox3b9865.352Oryzias_latipes_hni
ENSLAFG00000016623RBFOX310068.878ENSORLG00015009200rbfox3b8687.500Oryzias_latipes_hsok
ENSLAFG00000016623RBFOX36476.357ENSOMEG00000014677rbfox3b7668.454Oryzias_melastigma
ENSLAFG00000016623RBFOX39880.964ENSOGAG00000029595RBFOX39779.188Otolemur_garnettii
ENSLAFG00000016623RBFOX39863.819ENSOARG00000002908RBFOX310065.239Ovis_aries
ENSLAFG00000016623RBFOX38996.407ENSPPAG00000025383RBFOX39496.407Pan_paniscus
ENSLAFG00000016623RBFOX39292.174ENSPPRG00000007819RBFOX39690.435Panthera_pardus
ENSLAFG00000016623RBFOX310096.257ENSPTRG00000009727RBFOX310096.257Pan_troglodytes
ENSLAFG00000016623RBFOX39290.462ENSPANG00000019837RBFOX39785.542Papio_anubis
ENSLAFG00000016623RBFOX39974.619ENSPKIG00000010299rbfox3a9273.096Paramormyrops_kingsleyae
ENSLAFG00000016623RBFOX310059.416ENSPKIG00000022633-9258.718Paramormyrops_kingsleyae
ENSLAFG00000016623RBFOX38368.471ENSPMGG00000008000rbfox3b8673.701Periophthalmus_magnuspinnatus
ENSLAFG00000016623RBFOX39894.795ENSPEMG00000010500Rbfox39894.872Peromyscus_maniculatus_bairdii
ENSLAFG00000016623RBFOX36361.200ENSPMAG00000008689rbfox3b9962.055Petromyzon_marinus
ENSLAFG00000016623RBFOX39690.223ENSPCIG00000005766RBFOX39690.725Phascolarctos_cinereus
ENSLAFG00000016623RBFOX310071.733ENSPFOG00000018294rbfox3b9664.110Poecilia_formosa
ENSLAFG00000016623RBFOX38165.902ENSPLAG00000000481rbfox3b7190.698Poecilia_latipinna
ENSLAFG00000016623RBFOX39662.881ENSPMEG00000022997rbfox3b9564.134Poecilia_mexicana
ENSLAFG00000016623RBFOX39771.507ENSPREG00000012886rbfox3b9374.157Poecilia_reticulata
ENSLAFG00000016623RBFOX39872.237ENSPPYG00000008704RBFOX310069.821Pongo_abelii
ENSLAFG00000016623RBFOX39295.349ENSPCAG00000001401RBFOX39695.349Procavia_capensis
ENSLAFG00000016623RBFOX39993.029ENSPCOG00000012689RBFOX310095.278Propithecus_coquereli
ENSLAFG00000016623RBFOX39284.638ENSPVAG00000015243RBFOX39685.217Pteropus_vampyrus
ENSLAFG00000016623RBFOX37290.000ENSPNYG00000010414rbfox3b7590.000Pundamilia_nyererei
ENSLAFG00000016623RBFOX37688.235ENSPNYG00000009079-7587.879Pundamilia_nyererei
ENSLAFG00000016623RBFOX38180.769ENSPNAG00000018173rbfox3b7784.848Pygocentrus_nattereri
ENSLAFG00000016623RBFOX39872.911ENSPNAG00000002889rbfox3a8977.159Pygocentrus_nattereri
ENSLAFG00000016623RBFOX39893.169ENSRNOG00000003386Rbfox39893.716Rattus_norvegicus
ENSLAFG00000016623RBFOX39290.751ENSRBIG00000040449RBFOX39185.552Rhinopithecus_bieti
ENSLAFG00000016623RBFOX39290.751ENSRROG00000000766RBFOX310084.123Rhinopithecus_roxellana
ENSLAFG00000016623RBFOX39895.068ENSSBOG00000031591RBFOX39893.425Saimiri_boliviensis_boliviensis
ENSLAFG00000016623RBFOX39881.095ENSSHAG00000016076RBFOX310079.602Sarcophilus_harrisii
ENSLAFG00000016623RBFOX39975.381ENSSFOG00015023260rbfox3a9971.148Scleropages_formosus
ENSLAFG00000016623RBFOX38964.589ENSSFOG00015004716RBFOX39265.439Scleropages_formosus
ENSLAFG00000016623RBFOX39670.248ENSSMAG00000019052-9573.030Scophthalmus_maximus
ENSLAFG00000016623RBFOX310069.133ENSSMAG00000012618rbfox3b7870.856Scophthalmus_maximus
ENSLAFG00000016623RBFOX39868.112ENSSDUG00000015801-9668.112Seriola_dumerili
ENSLAFG00000016623RBFOX39662.881ENSSDUG00000023183rbfox3b9564.134Seriola_dumerili
ENSLAFG00000016623RBFOX39871.173ENSSLDG00000016098-9871.173Seriola_lalandi_dorsalis
ENSLAFG00000016623RBFOX39671.468ENSSLDG00000000149rbfox3b8973.876Seriola_lalandi_dorsalis
ENSLAFG00000016623RBFOX39278.902ENSSPUG00000011733RBFOX39582.371Sphenodon_punctatus
ENSLAFG00000016623RBFOX38563.438ENSSPAG00000004898-7566.197Stegastes_partitus
ENSLAFG00000016623RBFOX38180.392ENSSPAG00000017571rbfox3b7290.625Stegastes_partitus
ENSLAFG00000016623RBFOX38894.848ENSSSCG00000039498RBFOX310094.848Sus_scrofa
ENSLAFG00000016623RBFOX310068.883ENSTRUG00000004894rbfox3b9767.669Takifugu_rubripes
ENSLAFG00000016623RBFOX39971.007ENSTNIG00000011278rbfox3b9970.516Tetraodon_nigroviridis
ENSLAFG00000016623RBFOX39663.687ENSTBEG00000004296-9662.011Tupaia_belangeri
ENSLAFG00000016623RBFOX39289.275ENSTTRG00000003676RBFOX39687.536Tursiops_truncatus
ENSLAFG00000016623RBFOX39481.143ENSUAMG00000004668RBFOX39785.241Ursus_americanus
ENSLAFG00000016623RBFOX39696.389ENSVVUG00000017864RBFOX38996.389Vulpes_vulpes
ENSLAFG00000016623RBFOX39864.721ENSXETG00000020236rbfox39865.228Xenopus_tropicalis
ENSLAFG00000016623RBFOX39670.718ENSXCOG00000018262rbfox3b8592.000Xiphophorus_couchianus
ENSLAFG00000016623RBFOX310072.000ENSXMAG00000012939rbfox3b8973.743Xiphophorus_maculatus

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