EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000016742 (Gene tree)
Gene ID: -
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 45613 bases
Position: chrscaffold_1:107264797-107310409
Accession: 100655410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000014049	Exo_endo_phos	PF03372.23	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000016747	CNOT6-201	1671	-	ENSLAFP00000014049	557 (aa)	XP_023408164	G3THJ5

Gene Model

Click here to download ENSLAFG00000016742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000016742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000016742	CNOT6	100	79.533	ENSLAFG00000011449	CNOT6L	100	79.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000016742	CNOT6	100	97.487	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSLAFG00000016742	CNOT6	100	87.478	ENSAPOG00000009994	cnot6b	100	87.478	Acanthochromis_polyacanthus
ENSLAFG00000016742	CNOT6	100	98.032	ENSAMEG00000000949	CNOT6	99	98.032	Ailuropoda_melanoleuca
ENSLAFG00000016742	CNOT6	100	86.404	ENSACIG00000016566	cnot6b	100	86.404	Amphilophus_citrinellus
ENSLAFG00000016742	CNOT6	100	87.478	ENSAOCG00000006893	cnot6b	100	87.478	Amphiprion_ocellaris
ENSLAFG00000016742	CNOT6	100	87.478	ENSAPEG00000016949	cnot6b	100	87.478	Amphiprion_percula
ENSLAFG00000016742	CNOT6	100	85.689	ENSATEG00000007862	cnot6b	100	85.689	Anabas_testudineus
ENSLAFG00000016742	CNOT6	100	96.768	ENSAPLG00000012715	CNOT6	99	96.768	Anas_platyrhynchos
ENSLAFG00000016742	CNOT6	100	94.255	ENSACAG00000016548	CNOT6	100	94.255	Anolis_carolinensis
ENSLAFG00000016742	CNOT6	100	97.846	ENSANAG00000030436	CNOT6	96	97.846	Aotus_nancymaae
ENSLAFG00000016742	CNOT6	100	85.689	ENSACLG00000008279	cnot6b	100	86.583	Astatotilapia_calliptera
ENSLAFG00000016742	CNOT6	100	87.455	ENSAMXG00000019140	cnot6a	100	87.455	Astyanax_mexicanus
ENSLAFG00000016742	CNOT6	100	86.201	ENSAMXG00000034694	cnot6b	100	86.201	Astyanax_mexicanus
ENSLAFG00000016742	CNOT6	100	98.025	ENSBTAG00000017362	CNOT6	100	98.025	Bos_taurus
ENSLAFG00000016742	CNOT6	100	97.666	ENSCJAG00000009795	CNOT6	100	97.666	Callithrix_jacchus
ENSLAFG00000016742	CNOT6	100	98.384	ENSCAFG00000000464	CNOT6	100	98.384	Canis_familiaris
ENSLAFG00000016742	CNOT6	100	98.384	ENSCAFG00020002441	CNOT6	100	98.384	Canis_lupus_dingo
ENSLAFG00000016742	CNOT6	100	97.666	ENSCHIG00000019100	CNOT6	100	97.666	Capra_hircus
ENSLAFG00000016742	CNOT6	100	95.871	ENSTSYG00000003982	CNOT6	100	95.871	Carlito_syrichta
ENSLAFG00000016742	CNOT6	100	92.460	ENSCPOG00000035657	CNOT6	100	92.460	Cavia_porcellus
ENSLAFG00000016742	CNOT6	100	93.178	ENSCCAG00000033670	CNOT6	100	93.178	Cebus_capucinus
ENSLAFG00000016742	CNOT6	100	97.487	ENSCATG00000042014	CNOT6	100	97.487	Cercocebus_atys
ENSLAFG00000016742	CNOT6	100	96.050	ENSCLAG00000010489	CNOT6	100	96.050	Chinchilla_lanigera
ENSLAFG00000016742	CNOT6	100	97.487	ENSCSAG00000008165	CNOT6	100	97.487	Chlorocebus_sabaeus
ENSLAFG00000016742	CNOT6	100	96.768	ENSCHOG00000009680	CNOT6	100	96.768	Choloepus_hoffmanni
ENSLAFG00000016742	CNOT6	100	96.050	ENSCPBG00000008908	CNOT6	100	96.050	Chrysemys_picta_bellii
ENSLAFG00000016742	CNOT6	100	97.666	ENSCANG00000026756	CNOT6	100	97.666	Colobus_angolensis_palliatus
ENSLAFG00000016742	CNOT6	100	95.691	ENSCGRG00001011452	Cnot6	100	95.691	Cricetulus_griseus_chok1gshd
ENSLAFG00000016742	CNOT6	100	94.255	ENSCGRG00000010407	Cnot6	100	94.255	Cricetulus_griseus_crigri
ENSLAFG00000016742	CNOT6	100	86.583	ENSCSEG00000010939	cnot6b	100	86.583	Cynoglossus_semilaevis
ENSLAFG00000016742	CNOT6	100	86.380	ENSCVAG00000010538	cnot6b	100	86.380	Cyprinodon_variegatus
ENSLAFG00000016742	CNOT6	100	87.097	ENSDARG00000008255	cnot6a	100	87.097	Danio_rerio
ENSLAFG00000016742	CNOT6	100	84.946	ENSDARG00000101072	cnot6b	100	84.946	Danio_rerio
ENSLAFG00000016742	CNOT6	100	97.846	ENSDNOG00000041644	CNOT6	100	97.846	Dasypus_novemcinctus
ENSLAFG00000016742	CNOT6	100	87.074	ENSDORG00000001708	Cnot6	100	87.074	Dipodomys_ordii
ENSLAFG00000016742	CNOT6	100	78.712	ENSETEG00000006975	CNOT6	100	78.712	Echinops_telfairi
ENSLAFG00000016742	CNOT6	90	91.800	ENSEASG00005012957	-	99	91.800	Equus_asinus_asinus
ENSLAFG00000016742	CNOT6	100	97.487	ENSEASG00005012794	-	100	97.487	Equus_asinus_asinus
ENSLAFG00000016742	CNOT6	100	91.562	ENSECAG00000012704	-	99	91.562	Equus_caballus
ENSLAFG00000016742	CNOT6	100	98.205	ENSECAG00000019325	CNOT6	100	98.205	Equus_caballus
ENSLAFG00000016742	CNOT6	100	96.948	ENSEEUG00000015382	CNOT6	100	96.948	Erinaceus_europaeus
ENSLAFG00000016742	CNOT6	100	84.127	ENSELUG00000015981	cnot6b	99	84.127	Esox_lucius
ENSLAFG00000016742	CNOT6	100	82.975	ENSELUG00000024580	cnot6a	100	82.975	Esox_lucius
ENSLAFG00000016742	CNOT6	100	98.384	ENSFCAG00000001881	CNOT6	100	98.384	Felis_catus
ENSLAFG00000016742	CNOT6	100	96.948	ENSFALG00000007699	CNOT6	100	96.948	Ficedula_albicollis
ENSLAFG00000016742	CNOT6	100	96.230	ENSFDAG00000001999	CNOT6	100	96.230	Fukomys_damarensis
ENSLAFG00000016742	CNOT6	65	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSLAFG00000016742	CNOT6	95	85.633	ENSGMOG00000009767	cnot6b	99	85.633	Gadus_morhua
ENSLAFG00000016742	CNOT6	100	96.948	ENSGALG00000034316	CNOT6	100	96.948	Gallus_gallus
ENSLAFG00000016742	CNOT6	100	86.380	ENSGAFG00000008525	cnot6b	100	86.380	Gambusia_affinis
ENSLAFG00000016742	CNOT6	95	83.932	ENSGACG00000018046	cnot6b	99	83.932	Gasterosteus_aculeatus
ENSLAFG00000016742	CNOT6	100	80.251	ENSGAGG00000012176	CNOT6	100	79.928	Gopherus_agassizii
ENSLAFG00000016742	CNOT6	100	97.487	ENSGGOG00000003675	CNOT6	100	97.487	Gorilla_gorilla
ENSLAFG00000016742	CNOT6	100	85.868	ENSHBUG00000002819	cnot6b	100	86.762	Haplochromis_burtoni
ENSLAFG00000016742	CNOT6	100	96.230	ENSHGLG00000017756	CNOT6	100	96.230	Heterocephalus_glaber_female
ENSLAFG00000016742	CNOT6	100	96.230	ENSHGLG00100005747	CNOT6	100	96.230	Heterocephalus_glaber_male
ENSLAFG00000016742	CNOT6	100	84.436	ENSHCOG00000016176	cnot6b	100	85.331	Hippocampus_comes
ENSLAFG00000016742	CNOT6	100	86.380	ENSIPUG00000019831	cnot6a	100	86.380	Ictalurus_punctatus
ENSLAFG00000016742	CNOT6	100	85.663	ENSIPUG00000017482	cnot6b	100	85.663	Ictalurus_punctatus
ENSLAFG00000016742	CNOT6	100	97.666	ENSSTOG00000002803	CNOT6	100	97.666	Ictidomys_tridecemlineatus
ENSLAFG00000016742	CNOT6	100	95.871	ENSJJAG00000012296	Cnot6	100	95.871	Jaculus_jaculus
ENSLAFG00000016742	CNOT6	100	87.276	ENSKMAG00000004640	cnot6b	100	87.276	Kryptolebias_marmoratus
ENSLAFG00000016742	CNOT6	100	84.615	ENSLBEG00000027917	cnot6b	100	85.510	Labrus_bergylta
ENSLAFG00000016742	CNOT6	100	90.860	ENSLOCG00000010102	cnot6b	99	90.860	Lepisosteus_oculatus
ENSLAFG00000016742	CNOT6	100	97.487	ENSMFAG00000030867	CNOT6	100	97.487	Macaca_fascicularis
ENSLAFG00000016742	CNOT6	100	97.487	ENSMMUG00000018690	CNOT6	100	97.487	Macaca_mulatta
ENSLAFG00000016742	CNOT6	100	97.487	ENSMNEG00000038565	CNOT6	100	97.487	Macaca_nemestrina
ENSLAFG00000016742	CNOT6	100	97.487	ENSMLEG00000010555	CNOT6	100	97.487	Mandrillus_leucophaeus
ENSLAFG00000016742	CNOT6	100	87.657	ENSMAMG00000007515	cnot6b	100	87.657	Mastacembelus_armatus
ENSLAFG00000016742	CNOT6	100	85.689	ENSMZEG00005012899	cnot6b	100	86.583	Maylandia_zebra
ENSLAFG00000016742	CNOT6	100	96.768	ENSMAUG00000019798	Cnot6	100	96.768	Mesocricetus_auratus
ENSLAFG00000016742	CNOT6	98	87.316	ENSMICG00000028378	-	99	87.316	Microcebus_murinus
ENSLAFG00000016742	CNOT6	100	96.050	ENSMICG00000013018	-	100	96.050	Microcebus_murinus
ENSLAFG00000016742	CNOT6	100	96.768	ENSMOCG00000021662	Cnot6	100	96.768	Microtus_ochrogaster
ENSLAFG00000016742	CNOT6	100	84.588	ENSMMOG00000003227	cnot6b	100	84.588	Mola_mola
ENSLAFG00000016742	CNOT6	100	96.948	ENSMODG00000003979	CNOT6	100	96.948	Monodelphis_domestica
ENSLAFG00000016742	CNOT6	100	87.299	ENSMALG00000014251	cnot6b	100	87.299	Monopterus_albus
ENSLAFG00000016742	CNOT6	100	96.948	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.948	Mus_caroli
ENSLAFG00000016742	CNOT6	100	96.948	ENSMUSG00000020362	Cnot6	100	96.948	Mus_musculus
ENSLAFG00000016742	CNOT6	100	96.948	MGP_PahariEiJ_G0017413	Cnot6	100	96.948	Mus_pahari
ENSLAFG00000016742	CNOT6	100	96.589	MGP_SPRETEiJ_G0017122	Cnot6	100	96.589	Mus_spretus
ENSLAFG00000016742	CNOT6	100	98.205	ENSMPUG00000000587	CNOT6	96	98.205	Mustela_putorius_furo
ENSLAFG00000016742	CNOT6	100	96.263	ENSMLUG00000010257	CNOT6	100	96.263	Myotis_lucifugus
ENSLAFG00000016742	CNOT6	100	95.691	ENSNGAG00000008269	Cnot6	100	95.691	Nannospalax_galili
ENSLAFG00000016742	CNOT6	100	85.868	ENSNBRG00000010798	cnot6b	100	86.762	Neolamprologus_brichardi
ENSLAFG00000016742	CNOT6	100	96.050	ENSNLEG00000002322	CNOT6	100	96.050	Nomascus_leucogenys
ENSLAFG00000016742	CNOT6	81	98.131	ENSMEUG00000000025	CNOT6	81	98.131	Notamacropus_eugenii
ENSLAFG00000016742	CNOT6	88	96.420	ENSOPRG00000008244	-	88	96.420	Ochotona_princeps
ENSLAFG00000016742	CNOT6	100	95.512	ENSODEG00000007041	CNOT6	100	95.512	Octodon_degus
ENSLAFG00000016742	CNOT6	75	86.052	ENSONIG00000013027	cnot6b	99	86.052	Oreochromis_niloticus
ENSLAFG00000016742	CNOT6	100	95.691	ENSOANG00000010226	CNOT6	100	95.691	Ornithorhynchus_anatinus
ENSLAFG00000016742	CNOT6	100	96.780	ENSOCUG00000011083	CNOT6	100	96.780	Oryctolagus_cuniculus
ENSLAFG00000016742	CNOT6	100	86.225	ENSORLG00000005059	cnot6b	100	86.225	Oryzias_latipes
ENSLAFG00000016742	CNOT6	100	86.225	ENSORLG00020012784	cnot6b	100	86.225	Oryzias_latipes_hni
ENSLAFG00000016742	CNOT6	94	85.468	ENSORLG00015022658	cnot6b	98	85.468	Oryzias_latipes_hsok
ENSLAFG00000016742	CNOT6	100	86.404	ENSOMEG00000005295	cnot6b	100	86.404	Oryzias_melastigma
ENSLAFG00000016742	CNOT6	94	97.328	ENSOGAG00000032470	CNOT6	100	97.328	Otolemur_garnettii
ENSLAFG00000016742	CNOT6	97	97.417	ENSOARG00000001003	CNOT6	100	97.417	Ovis_aries
ENSLAFG00000016742	CNOT6	100	97.487	ENSPPAG00000032253	CNOT6	100	97.487	Pan_paniscus
ENSLAFG00000016742	CNOT6	100	98.205	ENSPPRG00000011912	CNOT6	100	98.205	Panthera_pardus
ENSLAFG00000016742	CNOT6	100	98.205	ENSPTIG00000016794	CNOT6	100	98.205	Panthera_tigris_altaica
ENSLAFG00000016742	CNOT6	100	97.487	ENSPTRG00000017636	CNOT6	100	97.487	Pan_troglodytes
ENSLAFG00000016742	CNOT6	100	97.487	ENSPANG00000016191	CNOT6	100	97.487	Papio_anubis
ENSLAFG00000016742	CNOT6	100	87.455	ENSPKIG00000021368	cnot6b	100	87.455	Paramormyrops_kingsleyae
ENSLAFG00000016742	CNOT6	98	96.507	ENSPSIG00000017307	CNOT6	100	96.507	Pelodiscus_sinensis
ENSLAFG00000016742	CNOT6	100	86.225	ENSPMGG00000011238	cnot6b	100	86.225	Periophthalmus_magnuspinnatus
ENSLAFG00000016742	CNOT6	100	95.691	ENSPEMG00000000627	Cnot6	100	95.691	Peromyscus_maniculatus_bairdii
ENSLAFG00000016742	CNOT6	100	96.768	ENSPCIG00000020319	CNOT6	99	96.768	Phascolarctos_cinereus
ENSLAFG00000016742	CNOT6	100	86.201	ENSPFOG00000006291	cnot6b	100	86.201	Poecilia_formosa
ENSLAFG00000016742	CNOT6	100	82.616	ENSPLAG00000008266	cnot6b	100	82.616	Poecilia_latipinna
ENSLAFG00000016742	CNOT6	100	86.380	ENSPMEG00000009091	cnot6b	100	86.380	Poecilia_mexicana
ENSLAFG00000016742	CNOT6	100	85.484	ENSPREG00000003713	cnot6b	100	85.484	Poecilia_reticulata
ENSLAFG00000016742	CNOT6	100	97.487	ENSPPYG00000016137	CNOT6	100	97.487	Pongo_abelii
ENSLAFG00000016742	CNOT6	71	98.496	ENSPCAG00000005599	-	71	98.496	Procavia_capensis
ENSLAFG00000016742	CNOT6	100	92.101	ENSPCOG00000017359	CNOT6	100	92.819	Propithecus_coquereli
ENSLAFG00000016742	CNOT6	100	93.178	ENSPVAG00000003069	CNOT6	100	93.178	Pteropus_vampyrus
ENSLAFG00000016742	CNOT6	100	85.510	ENSPNYG00000000321	cnot6b	100	86.404	Pundamilia_nyererei
ENSLAFG00000016742	CNOT6	100	86.380	ENSPNAG00000028816	cnot6b	100	86.380	Pygocentrus_nattereri
ENSLAFG00000016742	CNOT6	100	87.634	ENSPNAG00000029586	cnot6a	100	87.634	Pygocentrus_nattereri
ENSLAFG00000016742	CNOT6	100	95.871	ENSRNOG00000054891	Cnot6	100	95.871	Rattus_norvegicus
ENSLAFG00000016742	CNOT6	100	97.307	ENSRBIG00000004309	CNOT6	100	97.307	Rhinopithecus_bieti
ENSLAFG00000016742	CNOT6	100	97.307	ENSRROG00000035378	CNOT6	100	97.307	Rhinopithecus_roxellana
ENSLAFG00000016742	CNOT6	100	97.666	ENSSBOG00000030494	CNOT6	100	97.666	Saimiri_boliviensis_boliviensis
ENSLAFG00000016742	CNOT6	100	96.768	ENSSHAG00000017436	CNOT6	100	96.768	Sarcophilus_harrisii
ENSLAFG00000016742	CNOT6	100	86.918	ENSSFOG00015022383	cnot6a	96	86.918	Scleropages_formosus
ENSLAFG00000016742	CNOT6	100	89.068	ENSSFOG00015015133	CNOT6	100	89.068	Scleropages_formosus
ENSLAFG00000016742	CNOT6	100	85.510	ENSSMAG00000003084	cnot6b	100	85.510	Scophthalmus_maximus
ENSLAFG00000016742	CNOT6	100	87.120	ENSSDUG00000004151	cnot6b	100	87.120	Seriola_dumerili
ENSLAFG00000016742	CNOT6	100	86.404	ENSSLDG00000004448	cnot6b	100	87.299	Seriola_lalandi_dorsalis
ENSLAFG00000016742	CNOT6	64	77.654	ENSSARG00000012650	-	100	77.654	Sorex_araneus
ENSLAFG00000016742	CNOT6	100	96.050	ENSSPUG00000007893	CNOT6	100	96.050	Sphenodon_punctatus
ENSLAFG00000016742	CNOT6	100	87.299	ENSSPAG00000000149	cnot6b	100	87.299	Stegastes_partitus
ENSLAFG00000016742	CNOT6	100	98.205	ENSSSCG00000014009	CNOT6	100	98.268	Sus_scrofa
ENSLAFG00000016742	CNOT6	100	96.589	ENSTGUG00000001119	CNOT6	100	96.589	Taeniopygia_guttata
ENSLAFG00000016742	CNOT6	100	84.740	ENSTRUG00000002818	cnot6b	100	84.740	Takifugu_rubripes
ENSLAFG00000016742	CNOT6	100	85.099	ENSTNIG00000004443	cnot6b	99	85.099	Tetraodon_nigroviridis
ENSLAFG00000016742	CNOT6	87	68.172	ENSTBEG00000017094	-	100	68.172	Tupaia_belangeri
ENSLAFG00000016742	CNOT6	100	98.025	ENSTTRG00000009363	CNOT6	100	98.025	Tursiops_truncatus
ENSLAFG00000016742	CNOT6	77	97.902	ENSUAMG00000004579	CNOT6	88	97.902	Ursus_americanus
ENSLAFG00000016742	CNOT6	100	93.664	ENSUMAG00000024577	CNOT6	100	93.664	Ursus_maritimus
ENSLAFG00000016742	CNOT6	83	96.262	ENSVPAG00000003593	CNOT6	83	96.262	Vicugna_pacos
ENSLAFG00000016742	CNOT6	100	98.384	ENSVVUG00000026940	CNOT6	100	98.384	Vulpes_vulpes
ENSLAFG00000016742	CNOT6	100	82.975	ENSXCOG00000003360	cnot6b	100	82.975	Xiphophorus_couchianus
ENSLAFG00000016742	CNOT6	100	86.380	ENSXMAG00000008730	cnot6b	100	86.380	Xiphophorus_maculatus