EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000016885 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name
-
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
131457 bases
Position
chrscaffold_28:24366748-24498204
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000019476ResIIIPF04851.155.8e-1011
ENSLAFP00000014163ResIIIPF04851.157.9e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000016893-4137-ENSLAFP000000141631379 (aa)-G3THT6
ENSLAFT00000026743-1632-ENSLAFP00000028925543 (aa)-G3UM66
ENSLAFT00000031219-2604-ENSLAFP00000019476868 (aa)-G3TV68
Gene Model
Click here to download ENSLAFG00000016885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000016885's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000016885-5330.018ENSLAFG00000013092ERCC6L27730.018
ENSLAFG00000016885-5333.131ENSLAFG00000007583RAD54L6633.131
ENSLAFG00000016885-5133.469ENSLAFG00000015315-5933.198
ENSLAFG00000016885-6048.718ENSLAFG00000007049HELLS6348.718
ENSLAFG00000016885-6146.555ENSLAFG00000018136CHD1L5946.529
ENSLAFG00000016885-9875.556ENSLAFG00000023183CHD19764.562
ENSLAFG00000016885-7142.233ENSLAFG00000000896SMARCA16042.376
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000016885-10097.389ENSG00000173575CHD210098.246Homo_sapiens
ENSLAFG00000016885-9881.315ENSAPOG00000008913chd27774.521Acanthochromis_polyacanthus
ENSLAFG00000016885-9996.705ENSAMEG00000010805-10098.003Ailuropoda_melanoleuca
ENSLAFG00000016885-9881.084ENSAOCG00000016332chd27772.299Amphiprion_ocellaris
ENSLAFG00000016885-9881.084ENSAPEG00000016676chd27773.632Amphiprion_percula
ENSLAFG00000016885-9881.200ENSATEG00000005246chd27774.628Anabas_testudineus
ENSLAFG00000016885-9892.948ENSAPLG00000011141-7689.561Anas_platyrhynchos
ENSLAFG00000016885-9887.067ENSACAG00000000088-7382.493Anolis_carolinensis
ENSLAFG00000016885-10097.244ENSANAG00000024017-7696.542Aotus_nancymaae
ENSLAFG00000016885-9881.439ENSACLG00000021370chd25181.090Astatotilapia_calliptera
ENSLAFG00000016885-9698.559ENSBTAG00000017776CHD29998.559Bos_taurus
ENSLAFG00000016885-10097.099ENSCJAG00000020444-7597.099Callithrix_jacchus
ENSLAFG00000016885-10097.607ENSCAFG00000010998CHD210097.607Canis_familiaris
ENSLAFG00000016885-9996.591ENSCHIG00000022261-7395.808Capra_hircus
ENSLAFG00000016885-10097.679ENSTSYG00000003272-7997.679Carlito_syrichta
ENSLAFG00000016885-9996.136ENSCPOG00000005800-7396.532Cavia_porcellus
ENSLAFG00000016885-10097.172ENSCCAG00000035304-7597.172Cebus_capucinus
ENSLAFG00000016885-10097.389ENSCATG00000031069-7597.389Cercocebus_atys
ENSLAFG00000016885-10096.809ENSCLAG00000016269-7596.809Chinchilla_lanigera
ENSLAFG00000016885-10097.462ENSCSAG00000017007-7597.462Chlorocebus_sabaeus
ENSLAFG00000016885-8994.564ENSCHOG00000000608-6596.266Choloepus_hoffmanni
ENSLAFG00000016885-9693.429ENSCPBG00000018049-9593.198Chrysemys_picta_bellii
ENSLAFG00000016885-9963.510ENSCSAVG00000007580-9359.895Ciona_savignyi
ENSLAFG00000016885-10097.534ENSCANG00000038126-7696.659Colobus_angolensis_palliatus
ENSLAFG00000016885-10096.592ENSCGRG00001006649Chd27596.592Cricetulus_griseus_chok1gshd
ENSLAFG00000016885-10096.592ENSCGRG00000018154Chd27596.592Cricetulus_griseus_crigri
ENSLAFG00000016885-9872.216ENSCSEG00000003646chd26676.923Cynoglossus_semilaevis
ENSLAFG00000016885-9878.195ENSCVAG00000002427chd27772.700Cyprinodon_variegatus
ENSLAFG00000016885-9881.316ENSDARG00000060687chd28172.218Danio_rerio
ENSLAFG00000016885-9997.462ENSDNOG00000009796-7597.462Dasypus_novemcinctus
ENSLAFG00000016885-7680.619ENSEBUG00000014994chd26773.462Eptatretus_burgeri
ENSLAFG00000016885-9997.866ENSEASG00005015526-8294.224Equus_asinus_asinus
ENSLAFG00000016885-9880.997ENSELUG00000017981chd27673.767Esox_lucius
ENSLAFG00000016885-9893.287ENSFALG00000010369-7589.329Ficedula_albicollis
ENSLAFG00000016885-10097.172ENSFDAG00000020651-7597.172Fukomys_damarensis
ENSLAFG00000016885-9878.195ENSFHEG00000002119chd26675.578Fundulus_heteroclitus
ENSLAFG00000016885-9976.298ENSGMOG00000002890chd27673.708Gadus_morhua
ENSLAFG00000016885-9991.837ENSGALG00000006949CHD27588.905Gallus_gallus
ENSLAFG00000016885-9881.430ENSGAFG00000001905chd27172.887Gambusia_affinis
ENSLAFG00000016885-9878.893ENSGACG00000013246chd28072.198Gasterosteus_aculeatus
ENSLAFG00000016885-9593.552ENSGAGG00000013176-9893.431Gopherus_agassizii
ENSLAFG00000016885-10095.431ENSGGOG00000015677CHD27696.176Gorilla_gorilla
ENSLAFG00000016885-9881.555ENSHBUG00000017947chd27376.395Haplochromis_burtoni
ENSLAFG00000016885-10097.027ENSHGLG00000004435CHD27597.027Heterocephalus_glaber_female
ENSLAFG00000016885-10096.157ENSHGLG00100016376-7596.157Heterocephalus_glaber_male
ENSLAFG00000016885-9880.207ENSHCOG00000008855chd27271.277Hippocampus_comes
ENSLAFG00000016885-9882.230ENSIPUG00000000488chd27375.273Ictalurus_punctatus
ENSLAFG00000016885-10097.752ENSSTOG00000001270-7597.752Ictidomys_tridecemlineatus
ENSLAFG00000016885-10096.229ENSJJAG00000000213Chd27596.229Jaculus_jaculus
ENSLAFG00000016885-8980.964ENSKMAG00000015849chd27179.221Kryptolebias_marmoratus
ENSLAFG00000016885-10097.389ENSMFAG00000033343-7597.389Macaca_fascicularis
ENSLAFG00000016885-10097.389ENSMMUG00000011782-7597.389Macaca_mulatta
ENSLAFG00000016885-10096.886ENSMNEG00000036875-7696.328Macaca_nemestrina
ENSLAFG00000016885-10097.462ENSMLEG00000035026-7696.900Mandrillus_leucophaeus
ENSLAFG00000016885-9882.298ENSMAMG00000009082chd27774.645Mastacembelus_armatus
ENSLAFG00000016885-9881.439ENSMZEG00005021333chd25181.090Maylandia_zebra
ENSLAFG00000016885-9991.846ENSMGAG00000008966-7489.435Meleagris_gallopavo
ENSLAFG00000016885-9996.909ENSMICG00000000332-7496.909Microcebus_murinus
ENSLAFG00000016885-10096.302ENSMOCG00000015124Chd27596.302Microtus_ochrogaster
ENSLAFG00000016885-10092.435ENSMODG00000013158-7692.651Monodelphis_domestica
ENSLAFG00000016885-10096.229MGP_CAROLIEiJ_G0029860Chd27696.229Mus_caroli
ENSLAFG00000016885-10095.939ENSMUSG00000078671Chd27595.939Mus_musculus
ENSLAFG00000016885-10096.159MGP_PahariEiJ_G0013082Chd27596.159Mus_pahari
ENSLAFG00000016885-10096.012MGP_SPRETEiJ_G0030962Chd27596.012Mus_spretus
ENSLAFG00000016885-10097.534ENSMPUG00000017577-7597.534Mustela_putorius_furo
ENSLAFG00000016885-10095.372ENSMLUG00000009292-7595.372Myotis_lucifugus
ENSLAFG00000016885-10096.954ENSNGAG00000010792Chd27596.954Nannospalax_galili
ENSLAFG00000016885-10093.909ENSNLEG00000012349-7993.619Nomascus_leucogenys
ENSLAFG00000016885-8189.891ENSMEUG00000001522-6188.830Notamacropus_eugenii
ENSLAFG00000016885-10096.302ENSODEG00000016028-7696.302Octodon_degus
ENSLAFG00000016885-9881.084ENSONIG00000015136chd27376.320Oreochromis_niloticus
ENSLAFG00000016885-9590.276ENSOANG00000004385-7688.678Ornithorhynchus_anatinus
ENSLAFG00000016885-9995.968ENSOCUG00000001628-9996.505Oryctolagus_cuniculus
ENSLAFG00000016885-9880.969ENSORLG00000008403chd28867.720Oryzias_latipes
ENSLAFG00000016885-9880.969ENSORLG00020004138chd27375.789Oryzias_latipes_hni
ENSLAFG00000016885-5077.313ENSORLG00015017721chd28868.053Oryzias_latipes_hsok
ENSLAFG00000016885-9877.465ENSOMEG00000005831chd27571.257Oryzias_melastigma
ENSLAFG00000016885-10094.634ENSOGAG00000010399-7594.634Otolemur_garnettii
ENSLAFG00000016885-9996.992ENSOARG00000010343-7496.992Ovis_aries
ENSLAFG00000016885-10096.816ENSPPAG00000030381-7696.816Pan_paniscus
ENSLAFG00000016885-10097.389ENSPTRG00000007478CHD27597.389Pan_troglodytes
ENSLAFG00000016885-10093.546ENSPANG00000033355-7593.546Papio_anubis
ENSLAFG00000016885-9882.007ENSPKIG00000000495chd27774.319Paramormyrops_kingsleyae
ENSLAFG00000016885-8979.078ENSPMGG00000009941chd27376.221Periophthalmus_magnuspinnatus
ENSLAFG00000016885-10096.374ENSPEMG00000019507Chd27596.374Peromyscus_maniculatus_bairdii
ENSLAFG00000016885-6081.784ENSPMAG00000003871-10082.543Petromyzon_marinus
ENSLAFG00000016885-9893.418ENSPCIG00000009417-7295.357Phascolarctos_cinereus
ENSLAFG00000016885-9881.178ENSPFOG00000007050chd27774.768Poecilia_formosa
ENSLAFG00000016885-8073.496ENSPFOG00000000291-9462.614Poecilia_formosa
ENSLAFG00000016885-9881.200ENSPLAG00000005067chd27775.142Poecilia_latipinna
ENSLAFG00000016885-9881.178ENSPMEG00000019628chd27774.768Poecilia_mexicana
ENSLAFG00000016885-10095.649ENSPPYG00000006799-7595.649Pongo_abelii
ENSLAFG00000016885-10097.752ENSPCOG00000028084-7597.752Propithecus_coquereli
ENSLAFG00000016885-9881.439ENSPNYG00000010273chd25181.090Pundamilia_nyererei
ENSLAFG00000016885-9681.154ENSPNAG00000016719chd27074.101Pygocentrus_nattereri
ENSLAFG00000016885-10096.302ENSRNOG00000012716Chd27695.815Rattus_norvegicus
ENSLAFG00000016885-9997.137ENSRBIG00000036875-7697.137Rhinopithecus_bieti
ENSLAFG00000016885-10097.462ENSRROG00000041087-7597.462Rhinopithecus_roxellana
ENSLAFG00000016885-10097.317ENSSBOG00000023754-7696.613Saimiri_boliviensis_boliviensis
ENSLAFG00000016885-10092.723ENSSHAG00000012513-7693.012Sarcophilus_harrisii
ENSLAFG00000016885-9883.451ENSSFOG00015023759chd27775.591Scleropages_formosus
ENSLAFG00000016885-9879.585ENSSMAG00000001726chd27773.186Scophthalmus_maximus
ENSLAFG00000016885-9879.815ENSSLDG00000001146chd27472.857Seriola_lalandi_dorsalis
ENSLAFG00000016885-9388.700ENSSARG00000014112-6596.667Sorex_araneus
ENSLAFG00000016885-9891.228ENSSPUG00000011266-7484.799Sphenodon_punctatus
ENSLAFG00000016885-10097.825ENSSSCG00000002266-8497.825Sus_scrofa
ENSLAFG00000016885-9893.287ENSTGUG00000008540-7589.074Taeniopygia_guttata
ENSLAFG00000016885-9876.084ENSTRUG00000008842chd27570.664Takifugu_rubripes
ENSLAFG00000016885-9780.869ENSTNIG00000010760chd29573.218Tetraodon_nigroviridis
ENSLAFG00000016885-9597.797ENSTBEG00000017730-8397.797Tupaia_belangeri
ENSLAFG00000016885-9997.045ENSTTRG00000000430-7096.253Tursiops_truncatus
ENSLAFG00000016885-10097.389ENSUMAG00000000083-7797.389Ursus_maritimus
ENSLAFG00000016885-8198.195ENSVPAG00000009645-6398.195Vicugna_pacos
ENSLAFG00000016885-9985.995ENSXETG00000024129chd27381.119Xenopus_tropicalis
ENSLAFG00000016885-9881.649ENSXCOG00000020255chd27474.867Xiphophorus_couchianus
ENSLAFG00000016885-9881.315ENSXMAG00000002707chd27774.288Xiphophorus_maculatus

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