EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000017032 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 10822 bases
Position: chrscaffold_30:27136847-27147668
Accession: 100667800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000028970	RRM_1	PF00076.22	2.4e-22	1	1
ENSLAFP00000014278	RRM_1	PF00076.22	9.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017033	-	1452	-	ENSLAFP00000014278	484 (aa)	XP_003414210	G3TI30
ENSLAFT00000036988	-	1068	-	ENSLAFP00000028970	356 (aa)	-	G3UMB1

Gene Model

Click here to download ENSLAFG00000017032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000017032	-	99	45.580	ENSLAFG00000015766	-	80	46.154
ENSLAFG00000017032	-	58	31.250	ENSLAFG00000027079	-	67	30.808
ENSLAFG00000017032	-	99	42.308	ENSLAFG00000000424	HNRNPF	87	42.308
ENSLAFG00000017032	-	50	66.234	ENSLAFG00000012955	HNRNPH3	76	43.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017032	-	100	91.529	ENSG00000132463	GRSF1	99	100.000	Homo_sapiens
ENSLAFG00000017032	-	100	79.494	ENSAMEG00000005896	GRSF1	100	93.664	Ailuropoda_melanoleuca
ENSLAFG00000017032	-	99	66.292	ENSACAG00000012921	GRSF1	91	58.607	Anolis_carolinensis
ENSLAFG00000017032	-	100	92.562	ENSANAG00000022114	GRSF1	97	95.779	Aotus_nancymaae
ENSLAFG00000017032	-	100	91.753	ENSBTAG00000008577	GRSF1	99	93.370	Bos_taurus
ENSLAFG00000017032	-	100	91.736	ENSCJAG00000014477	GRSF1	99	95.779	Callithrix_jacchus
ENSLAFG00000017032	-	97	76.490	ENSCAFG00000002922	GRSF1	100	96.085	Canis_familiaris
ENSLAFG00000017032	-	100	91.803	ENSCAFG00020027060	GRSF1	98	100.000	Canis_lupus_dingo
ENSLAFG00000017032	-	100	91.942	ENSCHIG00000021580	GRSF1	100	91.736	Capra_hircus
ENSLAFG00000017032	-	100	80.056	ENSTSYG00000008487	-	100	96.226	Carlito_syrichta
ENSLAFG00000017032	-	97	70.448	ENSTSYG00000028860	-	99	77.473	Carlito_syrichta
ENSLAFG00000017032	-	97	72.783	ENSCAPG00000000156	GRSF1	100	88.636	Cavia_aperea
ENSLAFG00000017032	-	100	81.405	ENSCPOG00000011662	GRSF1	100	87.845	Cavia_porcellus
ENSLAFG00000017032	-	97	64.130	ENSCCAG00000024189	-	95	73.548	Cebus_capucinus
ENSLAFG00000017032	-	100	91.116	ENSCCAG00000028735	-	100	90.909	Cebus_capucinus
ENSLAFG00000017032	-	100	92.149	ENSCATG00000035808	GRSF1	99	95.161	Cercocebus_atys
ENSLAFG00000017032	-	99	75.833	ENSCLAG00000003057	GRSF1	100	88.674	Chinchilla_lanigera
ENSLAFG00000017032	-	100	91.736	ENSCSAG00000004856	GRSF1	100	91.529	Chlorocebus_sabaeus
ENSLAFG00000017032	-	100	64.804	ENSCPBG00000019502	GRSF1	86	65.155	Chrysemys_picta_bellii
ENSLAFG00000017032	-	97	79.580	ENSCANG00000037992	GRSF1	100	95.283	Colobus_angolensis_palliatus
ENSLAFG00000017032	-	100	88.508	ENSCGRG00001019953	Grsf1	99	92.265	Cricetulus_griseus_chok1gshd
ENSLAFG00000017032	-	100	78.090	ENSCGRG00000005357	Grsf1	100	92.265	Cricetulus_griseus_crigri
ENSLAFG00000017032	-	100	78.652	ENSDORG00000015145	Grsf1	100	96.350	Dipodomys_ordii
ENSLAFG00000017032	-	100	77.311	ENSETEG00000013786	GRSF1	100	93.913	Echinops_telfairi
ENSLAFG00000017032	-	100	91.959	ENSEASG00005016685	GRSF1	94	91.753	Equus_asinus_asinus
ENSLAFG00000017032	-	100	92.355	ENSECAG00000024208	GRSF1	94	92.149	Equus_caballus
ENSLAFG00000017032	-	100	38.719	ENSELUG00000011613	-	87	40.782	Esox_lucius
ENSLAFG00000017032	-	100	93.388	ENSFCAG00000007270	GRSF1	100	93.182	Felis_catus
ENSLAFG00000017032	-	98	53.409	ENSFALG00000008394	GRSF1	98	56.305	Ficedula_albicollis
ENSLAFG00000017032	-	74	89.781	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
ENSLAFG00000017032	-	75	60.309	ENSGALG00000031160	GRSF1	74	49.861	Gallus_gallus
ENSLAFG00000017032	-	100	65.556	ENSGAGG00000006013	GRSF1	99	64.909	Gopherus_agassizii
ENSLAFG00000017032	-	97	78.679	ENSGGOG00000014852	-	100	94.340	Gorilla_gorilla
ENSLAFG00000017032	-	100	82.438	ENSHGLG00000000661	GRSF1	100	87.845	Heterocephalus_glaber_female
ENSLAFG00000017032	-	100	76.124	ENSHGLG00100005974	GRSF1	100	94.161	Heterocephalus_glaber_male
ENSLAFG00000017032	-	88	92.533	ENSSTOG00000011569	GRSF1	100	100.000	Ictidomys_tridecemlineatus
ENSLAFG00000017032	-	99	75.216	ENSJJAG00000005325	Grsf1	100	93.431	Jaculus_jaculus
ENSLAFG00000017032	-	99	49.858	ENSLACG00000009507	GRSF1	99	52.210	Latimeria_chalumnae
ENSLAFG00000017032	-	99	45.278	ENSLOCG00000011589	GRSF1	80	45.699	Lepisosteus_oculatus
ENSLAFG00000017032	-	100	91.942	ENSMFAG00000037346	GRSF1	99	94.839	Macaca_fascicularis
ENSLAFG00000017032	-	100	91.942	ENSMMUG00000000380	GRSF1	99	95.130	Macaca_mulatta
ENSLAFG00000017032	-	100	85.950	ENSMNEG00000023162	GRSF1	98	97.619	Macaca_nemestrina
ENSLAFG00000017032	-	100	80.337	ENSMLEG00000007180	GRSF1	99	95.161	Mandrillus_leucophaeus
ENSLAFG00000017032	-	99	48.034	ENSMGAG00000009940	GRSF1	98	51.929	Meleagris_gallopavo
ENSLAFG00000017032	-	100	90.909	ENSMICG00000005385	GRSF1	99	92.857	Microcebus_murinus
ENSLAFG00000017032	-	72	95.620	ENSMOCG00000012769	-	100	95.620	Microtus_ochrogaster
ENSLAFG00000017032	-	100	78.937	ENSMODG00000019088	GRSF1	90	78.004	Monodelphis_domestica
ENSLAFG00000017032	-	100	90.496	MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	Mus_caroli
ENSLAFG00000017032	-	100	90.909	ENSMUSG00000044221	Grsf1	100	96.350	Mus_musculus
ENSLAFG00000017032	-	100	89.050	MGP_PahariEiJ_G0017155	Grsf1	100	94.891	Mus_pahari
ENSLAFG00000017032	-	100	90.289	MGP_SPRETEiJ_G0028374	Grsf1	99	92.265	Mus_spretus
ENSLAFG00000017032	-	100	80.337	ENSMPUG00000009499	GRSF1	97	93.188	Mustela_putorius_furo
ENSLAFG00000017032	-	100	79.109	ENSMLUG00000028158	GRSF1	100	90.437	Myotis_lucifugus
ENSLAFG00000017032	-	72	96.350	ENSNGAG00000022132	-	100	96.350	Nannospalax_galili
ENSLAFG00000017032	-	97	77.778	ENSNLEG00000007721	-	99	93.548	Nomascus_leucogenys
ENSLAFG00000017032	-	99	62.147	ENSMEUG00000015942	GRSF1	99	71.588	Notamacropus_eugenii
ENSLAFG00000017032	-	99	74.247	ENSOPRG00000010148	-	78	88.372	Ochotona_princeps
ENSLAFG00000017032	-	100	65.746	ENSODEG00000004897	-	100	77.624	Octodon_degus
ENSLAFG00000017032	-	100	84.091	ENSODEG00000001826	-	100	84.504	Octodon_degus
ENSLAFG00000017032	-	100	67.135	ENSODEG00000010775	-	99	78.886	Octodon_degus
ENSLAFG00000017032	-	94	50.958	ENSOANG00000013696	-	100	63.821	Ornithorhynchus_anatinus
ENSLAFG00000017032	-	100	79.213	ENSOCUG00000010029	GRSF1	77	93.939	Oryctolagus_cuniculus
ENSLAFG00000017032	-	100	75.766	ENSOGAG00000000141	-	100	90.437	Otolemur_garnettii
ENSLAFG00000017032	-	99	71.757	ENSOGAG00000026370	-	99	70.711	Otolemur_garnettii
ENSLAFG00000017032	-	100	78.904	ENSOARG00000011898	GRSF1	100	92.350	Ovis_aries
ENSLAFG00000017032	-	97	78.979	ENSPPAG00000042456	-	100	94.654	Pan_paniscus
ENSLAFG00000017032	-	100	93.388	ENSPPRG00000022913	GRSF1	100	93.182	Panthera_pardus
ENSLAFG00000017032	-	100	79.006	ENSPTIG00000008060	GRSF1	99	93.370	Panthera_tigris_altaica
ENSLAFG00000017032	-	98	91.387	ENSPTRG00000016136	GRSF1	99	94.194	Pan_troglodytes
ENSLAFG00000017032	-	100	91.529	ENSPANG00000018597	GRSF1	99	94.194	Papio_anubis
ENSLAFG00000017032	-	84	79.661	ENSPSIG00000014267	-	91	77.368	Pelodiscus_sinensis
ENSLAFG00000017032	-	100	78.371	ENSPEMG00000012814	Grsf1	99	93.370	Peromyscus_maniculatus_bairdii
ENSLAFG00000017032	-	100	78.763	ENSPCIG00000000627	GRSF1	100	75.967	Phascolarctos_cinereus
ENSLAFG00000017032	-	100	94.479	ENSPPYG00000014812	GRSF1	100	77.893	Pongo_abelii
ENSLAFG00000017032	-	99	84.728	ENSPCAG00000013949	GRSF1	100	84.937	Procavia_capensis
ENSLAFG00000017032	-	100	84.917	ENSPVAG00000004338	GRSF1	100	85.331	Pteropus_vampyrus
ENSLAFG00000017032	-	100	90.083	ENSRNOG00000003392	Grsf1	100	89.876	Rattus_norvegicus
ENSLAFG00000017032	-	100	92.149	ENSRBIG00000036494	GRSF1	99	95.161	Rhinopithecus_bieti
ENSLAFG00000017032	-	100	91.942	ENSRROG00000035735	GRSF1	99	94.839	Rhinopithecus_roxellana
ENSLAFG00000017032	-	97	93.082	ENSSBOG00000032141	GRSF1	98	93.082	Saimiri_boliviensis_boliviensis
ENSLAFG00000017032	-	100	75.000	ENSSHAG00000018365	GRSF1	95	84.196	Sarcophilus_harrisii
ENSLAFG00000017032	-	97	77.399	ENSSARG00000011681	GRSF1	100	94.481	Sorex_araneus
ENSLAFG00000017032	-	98	58.430	ENSSPUG00000007576	GRSF1	99	55.882	Sphenodon_punctatus
ENSLAFG00000017032	-	100	91.116	ENSSSCG00000008940	GRSF1	100	90.909	Sus_scrofa
ENSLAFG00000017032	-	98	50.838	ENSTGUG00000001644	GRSF1	98	55.718	Taeniopygia_guttata
ENSLAFG00000017032	-	97	78.019	ENSTBEG00000010173	GRSF1	100	95.779	Tupaia_belangeri
ENSLAFG00000017032	-	100	74.438	ENSTTRG00000008405	GRSF1	98	87.113	Tursiops_truncatus
ENSLAFG00000017032	-	78	97.129	ENSUAMG00000008901	GRSF1	93	94.615	Ursus_americanus
ENSLAFG00000017032	-	100	79.775	ENSUMAG00000003757	GRSF1	87	94.490	Ursus_maritimus
ENSLAFG00000017032	-	100	67.409	ENSVPAG00000011889	GRSF1	100	80.663	Vicugna_pacos
ENSLAFG00000017032	-	100	79.558	ENSVVUG00000004150	GRSF1	100	95.640	Vulpes_vulpes
ENSLAFG00000017032	-	99	49.162	ENSXETG00000013850	grsf1	100	50.847	Xenopus_tropicalis