EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000017112 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 8328 bases
Position: chrscaffold_11:53437525-53445852
Accession: 100663513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000020468	PRP38	PF03371.15	9.7e-58	1	1
ENSLAFP00000014348	PRP38	PF03371.15	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017113	PRPF38B-202	1638	-	ENSLAFP00000014348	546 (aa)	XP_003409582	G3TI91
ENSLAFT00000030663	PRPF38B-201	1341	-	ENSLAFP00000020468	446 (aa)	-	G3TY10

Gene Model

Click here to download ENSLAFG00000017112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017112	PRPF38B	100	97.802	ENSCJAG00000002510	-	100	97.802	Callithrix_jacchus
ENSLAFG00000017112	PRPF38B	80	94.023	ENSTSYG00000029817	PRPF38B	97	93.824	Carlito_syrichta
ENSLAFG00000017112	PRPF38B	100	98.168	ENSCCAG00000033941	-	100	98.168	Cebus_capucinus
ENSLAFG00000017112	PRPF38B	100	98.535	ENSCSAG00000001531	PRPF38B	100	98.535	Chlorocebus_sabaeus
ENSLAFG00000017112	PRPF38B	100	98.718	ENSCANG00000027711	PRPF38B	100	98.718	Colobus_angolensis_palliatus
ENSLAFG00000017112	PRPF38B	100	98.718	ENSMMUG00000010155	PRPF38B	100	98.718	Macaca_mulatta
ENSLAFG00000017112	PRPF38B	100	98.535	ENSMNEG00000032003	-	100	98.535	Macaca_nemestrina
ENSLAFG00000017112	PRPF38B	100	97.436	ENSMICG00000032109	PRPF38B	100	97.895	Microcebus_murinus
ENSLAFG00000017112	PRPF38B	80	96.092	ENSODEG00000007646	PRPF38B	97	95.962	Octodon_degus
ENSLAFG00000017112	PRPF38B	83	97.577	ENSOCUG00000027424	PRPF38B	100	97.577	Oryctolagus_cuniculus
ENSLAFG00000017112	PRPF38B	100	97.985	ENSPPYG00000001092	PRPF38B	100	97.985	Pongo_abelii
ENSLAFG00000017112	PRPF38B	100	97.619	ENSPCOG00000016051	PRPF38B	100	97.895	Propithecus_coquereli
ENSLAFG00000017112	PRPF38B	100	98.535	ENSRBIG00000043351	PRPF38B	100	98.535	Rhinopithecus_bieti
ENSLAFG00000017112	PRPF38B	100	98.535	ENSRROG00000029232	PRPF38B	100	98.535	Rhinopithecus_roxellana