EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000017501 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 7416 bases
Position: chrscaffold_12:37081492-37088907
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000014675	PseudoU_synth_2	PF00849.22	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017499	RPUSD3-201	1035	-	ENSLAFP00000014675	344 (aa)	-	G3TJ03

Gene Model

Click here to download ENSLAFG00000017501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000017501	RPUSD3	80	31.295	ENSLAFG00000005211	RPUSD4	99	31.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017501	RPUSD3	100	81.105	ENSG00000156990	RPUSD3	98	81.105	Homo_sapiens
ENSLAFG00000017501	RPUSD3	100	79.070	ENSAMEG00000016227	RPUSD3	98	79.070	Ailuropoda_melanoleuca
ENSLAFG00000017501	RPUSD3	95	49.091	ENSACAG00000009836	RPUSD3	92	49.091	Anolis_carolinensis
ENSLAFG00000017501	RPUSD3	75	59.480	ENSANAG00000007127	-	95	58.209	Aotus_nancymaae
ENSLAFG00000017501	RPUSD3	54	79.144	ENSANAG00000038118	-	89	79.144	Aotus_nancymaae
ENSLAFG00000017501	RPUSD3	58	80.808	ENSANAG00000019945	-	79	80.808	Aotus_nancymaae
ENSLAFG00000017501	RPUSD3	100	79.070	ENSBTAG00000007968	RPUSD3	100	79.070	Bos_taurus
ENSLAFG00000017501	RPUSD3	100	78.779	ENSCAFG00000029733	RPUSD3	98	78.779	Canis_familiaris
ENSLAFG00000017501	RPUSD3	100	78.779	ENSCAFG00020008582	RPUSD3	98	78.779	Canis_lupus_dingo
ENSLAFG00000017501	RPUSD3	100	77.907	ENSCHIG00000026027	RPUSD3	100	77.907	Capra_hircus
ENSLAFG00000017501	RPUSD3	100	74.425	ENSTSYG00000009994	RPUSD3	99	74.425	Carlito_syrichta
ENSLAFG00000017501	RPUSD3	76	76.806	ENSCAPG00000017559	RPUSD3	99	76.806	Cavia_aperea
ENSLAFG00000017501	RPUSD3	98	64.793	ENSCPOG00000037956	RPUSD3	89	65.680	Cavia_porcellus
ENSLAFG00000017501	RPUSD3	97	81.437	ENSCCAG00000029530	RPUSD3	94	83.000	Cebus_capucinus
ENSLAFG00000017501	RPUSD3	100	80.814	ENSCATG00000036939	RPUSD3	98	80.814	Cercocebus_atys
ENSLAFG00000017501	RPUSD3	100	80.233	ENSCSAG00000010506	RPUSD3	98	80.233	Chlorocebus_sabaeus
ENSLAFG00000017501	RPUSD3	51	84.821	ENSCHOG00000010151	-	67	84.821	Choloepus_hoffmanni
ENSLAFG00000017501	RPUSD3	72	56.400	ENSCPBG00000008825	RPUSD3	93	56.800	Chrysemys_picta_bellii
ENSLAFG00000017501	RPUSD3	100	80.233	ENSCANG00000040711	RPUSD3	98	80.233	Colobus_angolensis_palliatus
ENSLAFG00000017501	RPUSD3	98	71.429	ENSCGRG00001004923	Rpusd3	91	72.205	Cricetulus_griseus_chok1gshd
ENSLAFG00000017501	RPUSD3	95	72.866	ENSCGRG00000018315	Rpusd3	95	72.866	Cricetulus_griseus_crigri
ENSLAFG00000017501	RPUSD3	99	77.551	ENSDNOG00000039160	RPUSD3	91	77.551	Dasypus_novemcinctus
ENSLAFG00000017501	RPUSD3	76	75.746	ENSDORG00000026827	Rpusd3	92	75.746	Dipodomys_ordii
ENSLAFG00000017501	RPUSD3	100	77.326	ENSETEG00000006538	RPUSD3	97	77.326	Echinops_telfairi
ENSLAFG00000017501	RPUSD3	59	37.864	ENSEBUG00000015605	RPUSD3	67	37.864	Eptatretus_burgeri
ENSLAFG00000017501	RPUSD3	100	79.360	ENSEASG00005014160	RPUSD3	96	79.360	Equus_asinus_asinus
ENSLAFG00000017501	RPUSD3	99	80.236	ENSECAG00000019988	RPUSD3	94	80.236	Equus_caballus
ENSLAFG00000017501	RPUSD3	99	58.739	ENSEEUG00000007353	RPUSD3	96	59.249	Erinaceus_europaeus
ENSLAFG00000017501	RPUSD3	100	79.070	ENSFCAG00000014199	RPUSD3	98	79.070	Felis_catus
ENSLAFG00000017501	RPUSD3	79	48.718	ENSFALG00000012968	RPUSD3	99	48.718	Ficedula_albicollis
ENSLAFG00000017501	RPUSD3	77	78.030	ENSFDAG00000008350	RPUSD3	95	67.069	Fukomys_damarensis
ENSLAFG00000017501	RPUSD3	76	55.133	ENSGAGG00000007493	RPUSD3	82	56.061	Gopherus_agassizii
ENSLAFG00000017501	RPUSD3	99	82.006	ENSGGOG00000013120	RPUSD3	96	82.006	Gorilla_gorilla
ENSLAFG00000017501	RPUSD3	81	77.500	ENSHGLG00000011722	RPUSD3	72	77.500	Heterocephalus_glaber_female
ENSLAFG00000017501	RPUSD3	81	77.500	ENSHGLG00100016038	RPUSD3	72	77.500	Heterocephalus_glaber_male
ENSLAFG00000017501	RPUSD3	100	77.907	ENSSTOG00000002125	RPUSD3	98	77.907	Ictidomys_tridecemlineatus
ENSLAFG00000017501	RPUSD3	99	68.732	ENSJJAG00000012679	Rpusd3	99	68.732	Jaculus_jaculus
ENSLAFG00000017501	RPUSD3	100	80.523	ENSMFAG00000032407	RPUSD3	98	80.523	Macaca_fascicularis
ENSLAFG00000017501	RPUSD3	100	77.035	ENSMMUG00000010628	RPUSD3	97	84.516	Macaca_mulatta
ENSLAFG00000017501	RPUSD3	97	82.036	ENSMNEG00000040308	RPUSD3	95	82.036	Macaca_nemestrina
ENSLAFG00000017501	RPUSD3	100	80.814	ENSMLEG00000033940	RPUSD3	98	80.814	Mandrillus_leucophaeus
ENSLAFG00000017501	RPUSD3	99	72.059	ENSMAUG00000015473	Rpusd3	98	72.059	Mesocricetus_auratus
ENSLAFG00000017501	RPUSD3	100	77.326	ENSMICG00000002315	RPUSD3	100	77.326	Microcebus_murinus
ENSLAFG00000017501	RPUSD3	99	71.848	ENSMOCG00000022613	Rpusd3	99	71.848	Microtus_ochrogaster
ENSLAFG00000017501	RPUSD3	98	54.867	ENSMODG00000005210	RPUSD3	89	54.867	Monodelphis_domestica
ENSLAFG00000017501	RPUSD3	97	70.270	MGP_CAROLIEiJ_G0028725	Rpusd3	97	70.270	Mus_caroli
ENSLAFG00000017501	RPUSD3	96	71.299	ENSMUSG00000051169	Rpusd3	96	71.299	Mus_musculus
ENSLAFG00000017501	RPUSD3	97	72.072	MGP_PahariEiJ_G0022476	Rpusd3	97	72.072	Mus_pahari
ENSLAFG00000017501	RPUSD3	96	70.695	MGP_SPRETEiJ_G0029753	Rpusd3	96	70.695	Mus_spretus
ENSLAFG00000017501	RPUSD3	100	77.326	ENSMPUG00000017132	RPUSD3	98	77.326	Mustela_putorius_furo
ENSLAFG00000017501	RPUSD3	100	79.651	ENSMLUG00000006135	RPUSD3	99	79.651	Myotis_lucifugus
ENSLAFG00000017501	RPUSD3	97	73.731	ENSNGAG00000023704	Rpusd3	98	73.731	Nannospalax_galili
ENSLAFG00000017501	RPUSD3	100	67.151	ENSNLEG00000004214	RPUSD3	94	83.500	Nomascus_leucogenys
ENSLAFG00000017501	RPUSD3	76	62.835	ENSMEUG00000013098	-	100	62.977	Notamacropus_eugenii
ENSLAFG00000017501	RPUSD3	100	61.047	ENSOPRG00000002300	RPUSD3	98	61.047	Ochotona_princeps
ENSLAFG00000017501	RPUSD3	77	77.652	ENSODEG00000018137	RPUSD3	91	77.652	Octodon_degus
ENSLAFG00000017501	RPUSD3	83	49.123	ENSOANG00000012081	-	99	48.780	Ornithorhynchus_anatinus
ENSLAFG00000017501	RPUSD3	100	65.156	ENSOCUG00000027885	RPUSD3	100	65.156	Oryctolagus_cuniculus
ENSLAFG00000017501	RPUSD3	91	80.255	ENSOGAG00000012592	RPUSD3	100	80.255	Otolemur_garnettii
ENSLAFG00000017501	RPUSD3	100	79.651	ENSOARG00000005928	RPUSD3	98	79.651	Ovis_aries
ENSLAFG00000017501	RPUSD3	98	82.143	ENSPPAG00000038083	RPUSD3	94	83.500	Pan_paniscus
ENSLAFG00000017501	RPUSD3	100	79.070	ENSPPRG00000024433	RPUSD3	98	79.070	Panthera_pardus
ENSLAFG00000017501	RPUSD3	100	80.233	ENSPTIG00000006828	RPUSD3	100	80.233	Panthera_tigris_altaica
ENSLAFG00000017501	RPUSD3	98	81.845	ENSPTRG00000051760	RPUSD3	94	83.000	Pan_troglodytes
ENSLAFG00000017501	RPUSD3	100	80.814	ENSPANG00000023885	RPUSD3	98	80.814	Papio_anubis
ENSLAFG00000017501	RPUSD3	99	72.434	ENSPEMG00000017245	Rpusd3	99	72.434	Peromyscus_maniculatus_bairdii
ENSLAFG00000017501	RPUSD3	87	60.535	ENSPCIG00000021901	RPUSD3	87	60.535	Phascolarctos_cinereus
ENSLAFG00000017501	RPUSD3	99	82.405	ENSPPYG00000013676	RPUSD3	97	82.405	Pongo_abelii
ENSLAFG00000017501	RPUSD3	82	65.125	ENSPCAG00000013731	-	97	65.125	Procavia_capensis
ENSLAFG00000017501	RPUSD3	100	81.977	ENSPCOG00000018314	RPUSD3	98	81.977	Propithecus_coquereli
ENSLAFG00000017501	RPUSD3	100	81.105	ENSPVAG00000011107	RPUSD3	98	81.105	Pteropus_vampyrus
ENSLAFG00000017501	RPUSD3	97	67.868	ENSRNOG00000009084	Rpusd3	97	67.868	Rattus_norvegicus
ENSLAFG00000017501	RPUSD3	98	81.845	ENSRBIG00000041230	RPUSD3	94	84.000	Rhinopithecus_bieti
ENSLAFG00000017501	RPUSD3	98	81.845	ENSRROG00000043328	RPUSD3	94	84.000	Rhinopithecus_roxellana
ENSLAFG00000017501	RPUSD3	97	80.539	ENSSBOG00000036106	RPUSD3	95	80.539	Saimiri_boliviensis_boliviensis
ENSLAFG00000017501	RPUSD3	87	57.333	ENSSHAG00000015536	RPUSD3	97	57.333	Sarcophilus_harrisii
ENSLAFG00000017501	RPUSD3	100	77.326	ENSSSCG00000011555	RPUSD3	98	77.326	Sus_scrofa
ENSLAFG00000017501	RPUSD3	68	49.785	ENSTGUG00000008744	RPUSD3	93	49.309	Taeniopygia_guttata
ENSLAFG00000017501	RPUSD3	79	77.656	ENSTBEG00000000176	RPUSD3	94	77.656	Tupaia_belangeri
ENSLAFG00000017501	RPUSD3	100	79.942	ENSTTRG00000007544	RPUSD3	98	79.942	Tursiops_truncatus
ENSLAFG00000017501	RPUSD3	91	79.936	ENSUAMG00000011354	RPUSD3	98	79.936	Ursus_americanus
ENSLAFG00000017501	RPUSD3	99	79.351	ENSUMAG00000018830	RPUSD3	96	79.351	Ursus_maritimus
ENSLAFG00000017501	RPUSD3	100	80.233	ENSVVUG00000023735	RPUSD3	100	80.233	Vulpes_vulpes
ENSLAFG00000017501	RPUSD3	81	48.399	ENSXETG00000023546	rpusd3	99	48.399	Xenopus_tropicalis