EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000017556 (Gene tree)
Gene ID: -
Gene Symbol: YRDC
Alias: FLJ23476|IRIP|SUA5
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 3787 bases
Position: chrscaffold_34:17091032-17094818
Accession: 100667701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000014721	Sua5_yciO_yrdC	PF01300.18	1.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017550	YRDC-201	843	-	ENSLAFP00000014721	280 (aa)	XP_003415357	G3TJ39

Gene Model

Click here to download ENSLAFG00000017556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017556	YRDC	99	92.754	ENSG00000196449	YRDC	99	92.754	Homo_sapiens
ENSLAFG00000017556	YRDC	73	62.255	ENSAPOG00000024293	yrdc	77	62.255	Acanthochromis_polyacanthus
ENSLAFG00000017556	YRDC	66	95.699	ENSAMEG00000001173	YRDC	99	95.699	Ailuropoda_melanoleuca
ENSLAFG00000017556	YRDC	73	64.216	ENSACIG00000017330	yrdc	75	64.216	Amphilophus_citrinellus
ENSLAFG00000017556	YRDC	73	62.745	ENSAOCG00000021647	yrdc	77	62.745	Amphiprion_ocellaris
ENSLAFG00000017556	YRDC	73	62.745	ENSAPEG00000006164	yrdc	77	62.745	Amphiprion_percula
ENSLAFG00000017556	YRDC	73	64.706	ENSATEG00000010086	yrdc	75	64.706	Anabas_testudineus
ENSLAFG00000017556	YRDC	69	66.495	ENSACAG00000017203	YRDC	99	63.810	Anolis_carolinensis
ENSLAFG00000017556	YRDC	81	87.719	ENSANAG00000028788	-	96	87.719	Aotus_nancymaae
ENSLAFG00000017556	YRDC	96	84.133	ENSANAG00000031052	-	96	84.133	Aotus_nancymaae
ENSLAFG00000017556	YRDC	73	62.745	ENSACLG00000027775	yrdc	75	62.745	Astatotilapia_calliptera
ENSLAFG00000017556	YRDC	81	59.912	ENSAMXG00000037791	yrdc	85	60.000	Astyanax_mexicanus
ENSLAFG00000017556	YRDC	99	88.889	ENSBTAG00000006510	YRDC	99	88.889	Bos_taurus
ENSLAFG00000017556	YRDC	81	37.069	WBGene00012997	Y48C3A.18	97	37.903	Caenorhabditis_elegans
ENSLAFG00000017556	YRDC	99	91.667	ENSCJAG00000002078	YRDC	76	91.667	Callithrix_jacchus
ENSLAFG00000017556	YRDC	98	84.727	ENSCAFG00000003253	YRDC	98	84.420	Canis_familiaris
ENSLAFG00000017556	YRDC	98	86.545	ENSCAFG00020007843	YRDC	98	86.232	Canis_lupus_dingo
ENSLAFG00000017556	YRDC	99	88.172	ENSCHIG00000007882	YRDC	99	88.172	Capra_hircus
ENSLAFG00000017556	YRDC	64	92.179	ENSTSYG00000005555	YRDC	64	92.179	Carlito_syrichta
ENSLAFG00000017556	YRDC	100	85.357	ENSCPOG00000036144	YRDC	100	85.357	Cavia_porcellus
ENSLAFG00000017556	YRDC	99	91.304	ENSCCAG00000028891	YRDC	99	91.304	Cebus_capucinus
ENSLAFG00000017556	YRDC	99	91.667	ENSCATG00000036928	YRDC	99	91.667	Cercocebus_atys
ENSLAFG00000017556	YRDC	100	86.786	ENSCLAG00000015012	YRDC	100	86.786	Chinchilla_lanigera
ENSLAFG00000017556	YRDC	99	91.304	ENSCSAG00000001116	YRDC	99	91.304	Chlorocebus_sabaeus
ENSLAFG00000017556	YRDC	75	88.038	ENSCHOG00000005500	YRDC	100	88.038	Choloepus_hoffmanni
ENSLAFG00000017556	YRDC	81	63.362	ENSCPBG00000018446	YRDC	99	63.362	Chrysemys_picta_bellii
ENSLAFG00000017556	YRDC	73	48.357	ENSCING00000007564	-	98	48.357	Ciona_intestinalis
ENSLAFG00000017556	YRDC	73	48.341	ENSCSAVG00000009982	-	98	48.341	Ciona_savignyi
ENSLAFG00000017556	YRDC	99	91.304	ENSCANG00000031111	YRDC	99	91.304	Colobus_angolensis_palliatus
ENSLAFG00000017556	YRDC	99	78.986	ENSCGRG00001000829	-	77	79.061	Cricetulus_griseus_chok1gshd
ENSLAFG00000017556	YRDC	100	85.714	ENSCGRG00001014496	-	100	85.714	Cricetulus_griseus_chok1gshd
ENSLAFG00000017556	YRDC	75	61.244	ENSCSEG00000019075	yrdc	75	61.244	Cynoglossus_semilaevis
ENSLAFG00000017556	YRDC	88	53.815	ENSCVAG00000017355	yrdc	92	53.815	Cyprinodon_variegatus
ENSLAFG00000017556	YRDC	83	56.838	ENSDARG00000041428	yrdc	97	56.838	Danio_rerio
ENSLAFG00000017556	YRDC	99	90.681	ENSDNOG00000038789	-	100	91.016	Dasypus_novemcinctus
ENSLAFG00000017556	YRDC	71	64.000	ENSDNOG00000036198	-	97	64.000	Dasypus_novemcinctus
ENSLAFG00000017556	YRDC	79	82.819	ENSDORG00000008788	Yrdc	99	82.819	Dipodomys_ordii
ENSLAFG00000017556	YRDC	71	48.020	FBgn0061361	CG33786	81	48.020	Drosophila_melanogaster
ENSLAFG00000017556	YRDC	100	78.214	ENSETEG00000003442	YRDC	100	78.214	Echinops_telfairi
ENSLAFG00000017556	YRDC	81	52.423	ENSEBUG00000014080	yrdc	94	52.423	Eptatretus_burgeri
ENSLAFG00000017556	YRDC	99	92.473	ENSEASG00005012253	YRDC	99	92.473	Equus_asinus_asinus
ENSLAFG00000017556	YRDC	99	92.832	ENSECAG00000022522	YRDC	99	92.832	Equus_caballus
ENSLAFG00000017556	YRDC	73	63.725	ENSELUG00000018071	yrdc	66	63.725	Esox_lucius
ENSLAFG00000017556	YRDC	100	92.857	ENSFCAG00000011018	YRDC	100	92.857	Felis_catus
ENSLAFG00000017556	YRDC	68	73.822	ENSFALG00000000964	YRDC	89	72.821	Ficedula_albicollis
ENSLAFG00000017556	YRDC	68	31.683	ENSFALG00000011333	-	52	31.683	Ficedula_albicollis
ENSLAFG00000017556	YRDC	85	54.582	ENSFHEG00000001029	yrdc	94	54.661	Fundulus_heteroclitus
ENSLAFG00000017556	YRDC	73	64.216	ENSGMOG00000015635	yrdc	97	64.216	Gadus_morhua
ENSLAFG00000017556	YRDC	95	62.547	ENSGALG00000029001	YRDC	98	62.547	Gallus_gallus
ENSLAFG00000017556	YRDC	70	31.884	ENSGALG00000025899	-	68	31.884	Gallus_gallus
ENSLAFG00000017556	YRDC	93	52.490	ENSGAFG00000008396	yrdc	95	52.490	Gambusia_affinis
ENSLAFG00000017556	YRDC	81	58.621	ENSGACG00000013878	yrdc	95	58.621	Gasterosteus_aculeatus
ENSLAFG00000017556	YRDC	83	65.948	ENSGAGG00000014968	YRDC	99	65.948	Gopherus_agassizii
ENSLAFG00000017556	YRDC	99	92.754	ENSGGOG00000007619	YRDC	99	92.754	Gorilla_gorilla
ENSLAFG00000017556	YRDC	73	63.235	ENSHBUG00000009298	yrdc	75	63.235	Haplochromis_burtoni
ENSLAFG00000017556	YRDC	100	88.571	ENSHGLG00000014075	YRDC	100	88.571	Heterocephalus_glaber_female
ENSLAFG00000017556	YRDC	100	78.214	ENSHGLG00100002734	YRDC	100	78.214	Heterocephalus_glaber_male
ENSLAFG00000017556	YRDC	85	56.067	ENSHCOG00000006598	yrdc	92	56.067	Hippocampus_comes
ENSLAFG00000017556	YRDC	81	59.292	ENSIPUG00000014985	yrdc	92	59.292	Ictalurus_punctatus
ENSLAFG00000017556	YRDC	99	89.606	ENSSTOG00000001643	YRDC	99	89.606	Ictidomys_tridecemlineatus
ENSLAFG00000017556	YRDC	81	59.825	ENSKMAG00000013468	yrdc	84	59.825	Kryptolebias_marmoratus
ENSLAFG00000017556	YRDC	75	63.333	ENSLBEG00000027501	yrdc	76	63.333	Labrus_bergylta
ENSLAFG00000017556	YRDC	88	58.301	ENSLACG00000010689	YRDC	95	65.700	Latimeria_chalumnae
ENSLAFG00000017556	YRDC	68	32.857	ENSLACG00000017624	si:ch211-153b23.3	61	32.857	Latimeria_chalumnae
ENSLAFG00000017556	YRDC	74	65.217	ENSLOCG00000003321	yrdc	85	65.217	Lepisosteus_oculatus
ENSLAFG00000017556	YRDC	74	93.720	ENSMFAG00000003487	YRDC	98	93.720	Macaca_fascicularis
ENSLAFG00000017556	YRDC	99	91.667	ENSMMUG00000005372	YRDC	73	91.667	Macaca_mulatta
ENSLAFG00000017556	YRDC	99	91.667	ENSMNEG00000029348	YRDC	99	91.667	Macaca_nemestrina
ENSLAFG00000017556	YRDC	52	93.151	ENSMLEG00000041122	YRDC	97	93.151	Mandrillus_leucophaeus
ENSLAFG00000017556	YRDC	81	60.793	ENSMAMG00000007315	yrdc	83	60.793	Mastacembelus_armatus
ENSLAFG00000017556	YRDC	73	62.745	ENSMZEG00005006948	yrdc	75	62.745	Maylandia_zebra
ENSLAFG00000017556	YRDC	72	71.287	ENSMGAG00000002833	YRDC	99	71.287	Meleagris_gallopavo
ENSLAFG00000017556	YRDC	70	31.884	ENSMGAG00000005489	-	53	31.884	Meleagris_gallopavo
ENSLAFG00000017556	YRDC	99	89.606	ENSMICG00000031688	YRDC	100	89.606	Microcebus_murinus
ENSLAFG00000017556	YRDC	75	85.646	ENSMOCG00000000164	-	81	85.646	Microtus_ochrogaster
ENSLAFG00000017556	YRDC	73	61.765	ENSMMOG00000002119	yrdc	76	61.765	Mola_mola
ENSLAFG00000017556	YRDC	100	69.792	ENSMODG00000017750	YRDC	100	69.792	Monodelphis_domestica
ENSLAFG00000017556	YRDC	89	56.627	ENSMALG00000012471	yrdc	92	56.627	Monopterus_albus
ENSLAFG00000017556	YRDC	100	78.929	MGP_CAROLIEiJ_G0026453	Yrdc	98	91.262	Mus_caroli
ENSLAFG00000017556	YRDC	100	84.286	ENSMUSG00000028889	Yrdc	100	90.476	Mus_musculus
ENSLAFG00000017556	YRDC	100	83.571	MGP_PahariEiJ_G0028784	Yrdc	100	89.524	Mus_pahari
ENSLAFG00000017556	YRDC	100	84.643	MGP_SPRETEiJ_G0027432	Yrdc	100	84.643	Mus_spretus
ENSLAFG00000017556	YRDC	78	94.037	ENSMPUG00000014542	YRDC	87	94.037	Mustela_putorius_furo
ENSLAFG00000017556	YRDC	99	66.429	ENSMLUG00000028796	-	99	66.429	Myotis_lucifugus
ENSLAFG00000017556	YRDC	70	83.077	ENSMLUG00000024310	-	96	83.077	Myotis_lucifugus
ENSLAFG00000017556	YRDC	99	88.489	ENSMLUG00000000955	-	99	88.489	Myotis_lucifugus
ENSLAFG00000017556	YRDC	100	81.429	ENSNGAG00000019099	Yrdc	100	81.429	Nannospalax_galili
ENSLAFG00000017556	YRDC	73	63.235	ENSNBRG00000009475	yrdc	75	63.235	Neolamprologus_brichardi
ENSLAFG00000017556	YRDC	99	91.727	ENSNLEG00000011665	YRDC	99	91.727	Nomascus_leucogenys
ENSLAFG00000017556	YRDC	76	81.690	ENSMEUG00000005068	YRDC	99	81.690	Notamacropus_eugenii
ENSLAFG00000017556	YRDC	99	86.232	ENSODEG00000007401	YRDC	100	86.667	Octodon_degus
ENSLAFG00000017556	YRDC	73	63.235	ENSONIG00000016213	yrdc	84	63.235	Oreochromis_niloticus
ENSLAFG00000017556	YRDC	100	90.714	ENSOCUG00000005384	YRDC	96	90.714	Oryctolagus_cuniculus
ENSLAFG00000017556	YRDC	73	58.333	ENSORLG00000014393	yrdc	75	58.333	Oryzias_latipes
ENSLAFG00000017556	YRDC	73	58.333	ENSORLG00020019663	yrdc	76	58.333	Oryzias_latipes_hni
ENSLAFG00000017556	YRDC	73	58.621	ENSORLG00015004625	yrdc	76	58.621	Oryzias_latipes_hsok
ENSLAFG00000017556	YRDC	73	59.314	ENSOMEG00000018550	yrdc	77	59.314	Oryzias_melastigma
ENSLAFG00000017556	YRDC	99	88.043	ENSOGAG00000030474	YRDC	100	88.043	Otolemur_garnettii
ENSLAFG00000017556	YRDC	93	86.590	ENSOARG00000019873	YRDC	97	83.453	Ovis_aries
ENSLAFG00000017556	YRDC	51	94.444	ENSPPAG00000039722	-	97	94.444	Pan_paniscus
ENSLAFG00000017556	YRDC	100	93.214	ENSPPRG00000007752	YRDC	100	93.214	Panthera_pardus
ENSLAFG00000017556	YRDC	89	65.060	ENSPTIG00000019821	YRDC	99	65.060	Panthera_tigris_altaica
ENSLAFG00000017556	YRDC	99	92.391	ENSPTRG00000000557	YRDC	99	92.391	Pan_troglodytes
ENSLAFG00000017556	YRDC	99	91.667	ENSPANG00000006487	YRDC	74	91.667	Papio_anubis
ENSLAFG00000017556	YRDC	73	63.547	ENSPKIG00000004574	yrdc	74	63.547	Paramormyrops_kingsleyae
ENSLAFG00000017556	YRDC	96	57.565	ENSPSIG00000006483	YRDC	94	57.565	Pelodiscus_sinensis
ENSLAFG00000017556	YRDC	73	61.765	ENSPMGG00000004184	yrdc	78	61.765	Periophthalmus_magnuspinnatus
ENSLAFG00000017556	YRDC	65	87.845	ENSPEMG00000016985	Yrdc	93	75.546	Peromyscus_maniculatus_bairdii
ENSLAFG00000017556	YRDC	63	56.742	ENSPMAG00000002905	yrdc	96	56.742	Petromyzon_marinus
ENSLAFG00000017556	YRDC	94	72.862	ENSPCIG00000025731	YRDC	97	72.202	Phascolarctos_cinereus
ENSLAFG00000017556	YRDC	93	53.640	ENSPFOG00000023097	yrdc	95	53.640	Poecilia_formosa
ENSLAFG00000017556	YRDC	93	53.257	ENSPLAG00000020882	yrdc	95	53.257	Poecilia_latipinna
ENSLAFG00000017556	YRDC	93	53.640	ENSPMEG00000013237	yrdc	96	53.640	Poecilia_mexicana
ENSLAFG00000017556	YRDC	82	56.710	ENSPREG00000005285	yrdc	85	56.710	Poecilia_reticulata
ENSLAFG00000017556	YRDC	85	88.703	ENSPPYG00000001523	-	98	88.333	Pongo_abelii
ENSLAFG00000017556	YRDC	99	92.086	ENSPCAG00000016850	YRDC	99	92.086	Procavia_capensis
ENSLAFG00000017556	YRDC	99	88.889	ENSPCOG00000013214	YRDC	99	88.889	Propithecus_coquereli
ENSLAFG00000017556	YRDC	99	91.667	ENSPVAG00000010147	YRDC	99	91.667	Pteropus_vampyrus
ENSLAFG00000017556	YRDC	73	63.235	ENSPNYG00000013956	yrdc	75	63.235	Pundamilia_nyererei
ENSLAFG00000017556	YRDC	75	58.571	ENSPNAG00000015625	yrdc	85	58.571	Pygocentrus_nattereri
ENSLAFG00000017556	YRDC	100	85.000	ENSRNOG00000025424	Yrdc	100	85.000	Rattus_norvegicus
ENSLAFG00000017556	YRDC	99	91.667	ENSRBIG00000032289	YRDC	99	91.667	Rhinopithecus_bieti
ENSLAFG00000017556	YRDC	87	83.539	ENSRROG00000039370	YRDC	79	83.539	Rhinopithecus_roxellana
ENSLAFG00000017556	YRDC	82	85.590	ENSSBOG00000018937	YRDC	92	85.590	Saimiri_boliviensis_boliviensis
ENSLAFG00000017556	YRDC	53	81.757	ENSSHAG00000013957	-	100	81.757	Sarcophilus_harrisii
ENSLAFG00000017556	YRDC	74	64.078	ENSSFOG00015006128	yrdc	88	64.078	Scleropages_formosus
ENSLAFG00000017556	YRDC	73	63.235	ENSSMAG00000005195	yrdc	94	55.159	Scophthalmus_maximus
ENSLAFG00000017556	YRDC	58	30.114	ENSSDUG00000006736	-	92	30.114	Seriola_dumerili
ENSLAFG00000017556	YRDC	73	63.235	ENSSDUG00000009775	yrdc	75	63.235	Seriola_dumerili
ENSLAFG00000017556	YRDC	50	31.081	ENSSDUG00000006631	-	62	31.081	Seriola_dumerili
ENSLAFG00000017556	YRDC	73	63.235	ENSSLDG00000003196	yrdc	75	63.235	Seriola_lalandi_dorsalis
ENSLAFG00000017556	YRDC	81	64.474	ENSSPUG00000003946	YRDC	86	64.474	Sphenodon_punctatus
ENSLAFG00000017556	YRDC	73	60.294	ENSSPAG00000012559	yrdc	75	60.294	Stegastes_partitus
ENSLAFG00000017556	YRDC	100	91.071	ENSSSCG00000040425	YRDC	100	91.071	Sus_scrofa
ENSLAFG00000017556	YRDC	51	77.778	ENSTGUG00000001507	YRDC	98	77.778	Taeniopygia_guttata
ENSLAFG00000017556	YRDC	71	58.081	ENSTRUG00000005923	yrdc	72	62.121	Takifugu_rubripes
ENSLAFG00000017556	YRDC	56	91.139	ENSTBEG00000008863	YRDC	100	91.139	Tupaia_belangeri
ENSLAFG00000017556	YRDC	53	89.189	ENSTTRG00000013538	-	99	89.189	Tursiops_truncatus
ENSLAFG00000017556	YRDC	72	96.040	ENSUAMG00000006150	YRDC	99	96.040	Ursus_americanus
ENSLAFG00000017556	YRDC	84	73.932	ENSVPAG00000006642	YRDC	99	73.932	Vicugna_pacos
ENSLAFG00000017556	YRDC	54	86.184	ENSVVUG00000023132	-	50	86.184	Vulpes_vulpes
ENSLAFG00000017556	YRDC	82	62.069	ENSXETG00000014420	yrdc	97	62.069	Xenopus_tropicalis
ENSLAFG00000017556	YRDC	82	54.978	ENSXCOG00000000829	yrdc	95	54.978	Xiphophorus_couchianus
ENSLAFG00000017556	YRDC	93	51.724	ENSXMAG00000014606	yrdc	90	51.724	Xiphophorus_maculatus