EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000017588 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 6521 bases
Position: chrscaffold_19:27718729-27725249
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000014749	LSM	PF01423.22	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017586	SNRPB-201	672	-	ENSLAFP00000014749	224 (aa)	-	G3TJ63

Gene Model

Click here to download ENSLAFG00000017588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000017588	SNRPB	96	88.688	ENSLAFG00000009458	SNRPN	92	88.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017588	SNRPB	99	96.053	ENSG00000125835	SNRPB	99	96.053	Homo_sapiens
ENSLAFG00000017588	SNRPB	77	88.889	ENSAPOG00000019606	snrpb	56	90.419	Acanthochromis_polyacanthus
ENSLAFG00000017588	SNRPB	99	96.070	ENSAMEG00000011353	SNRPB	94	96.070	Ailuropoda_melanoleuca
ENSLAFG00000017588	SNRPB	75	88.571	ENSACIG00000014480	snrpb	71	90.123	Amphilophus_citrinellus
ENSLAFG00000017588	SNRPB	77	88.889	ENSAOCG00000006876	snrpb	69	90.419	Amphiprion_ocellaris
ENSLAFG00000017588	SNRPB	77	88.889	ENSAPEG00000021585	snrpb	71	90.419	Amphiprion_percula
ENSLAFG00000017588	SNRPB	77	88.333	ENSATEG00000009836	snrpb	69	89.820	Anabas_testudineus
ENSLAFG00000017588	SNRPB	92	93.171	ENSACAG00000002053	SNRPB	88	93.171	Anolis_carolinensis
ENSLAFG00000017588	SNRPB	99	96.053	ENSANAG00000024443	-	99	96.053	Aotus_nancymaae
ENSLAFG00000017588	SNRPB	99	83.478	ENSANAG00000036271	-	76	88.830	Aotus_nancymaae
ENSLAFG00000017588	SNRPB	77	88.889	ENSACLG00000014707	snrpb	69	90.419	Astatotilapia_calliptera
ENSLAFG00000017588	SNRPB	78	89.560	ENSAMXG00000029434	snrpb	76	90.659	Astyanax_mexicanus
ENSLAFG00000017588	SNRPB	99	96.491	ENSBTAG00000001038	SNRPB	99	96.491	Bos_taurus
ENSLAFG00000017588	SNRPB	99	96.053	ENSCJAG00000020971	-	99	96.053	Callithrix_jacchus
ENSLAFG00000017588	SNRPB	92	88.263	ENSCJAG00000023097	-	78	87.766	Callithrix_jacchus
ENSLAFG00000017588	SNRPB	81	84.737	ENSCAFG00000031109	-	79	81.053	Canis_familiaris
ENSLAFG00000017588	SNRPB	99	96.053	ENSCAFG00000006693	-	99	96.053	Canis_familiaris
ENSLAFG00000017588	SNRPB	99	96.053	ENSCAFG00020016981	-	95	96.053	Canis_lupus_dingo
ENSLAFG00000017588	SNRPB	99	96.491	ENSCHIG00000025449	-	99	96.491	Capra_hircus
ENSLAFG00000017588	SNRPB	97	76.712	ENSTSYG00000032303	-	55	79.861	Carlito_syrichta
ENSLAFG00000017588	SNRPB	100	95.671	ENSTSYG00000014498	-	99	96.053	Carlito_syrichta
ENSLAFG00000017588	SNRPB	99	96.070	ENSCAPG00000012669	SNRPB	99	96.053	Cavia_aperea
ENSLAFG00000017588	SNRPB	99	96.053	ENSCPOG00000039408	SNRPB	99	96.053	Cavia_porcellus
ENSLAFG00000017588	SNRPB	99	96.053	ENSCCAG00000026002	SNRPB	99	96.053	Cebus_capucinus
ENSLAFG00000017588	SNRPB	54	84.252	ENSCCAG00000035140	-	89	76.471	Cebus_capucinus
ENSLAFG00000017588	SNRPB	100	95.671	ENSCATG00000030230	SNRPB	99	96.053	Cercocebus_atys
ENSLAFG00000017588	SNRPB	97	96.000	ENSCLAG00000012442	SNRPB	95	96.000	Chinchilla_lanigera
ENSLAFG00000017588	SNRPB	99	96.053	ENSCSAG00000010840	SNRPB	99	96.053	Chlorocebus_sabaeus
ENSLAFG00000017588	SNRPB	95	92.273	ENSCPBG00000026801	SNRPB	96	92.273	Chrysemys_picta_bellii
ENSLAFG00000017588	SNRPB	99	96.053	ENSCANG00000019461	SNRPB	99	96.053	Colobus_angolensis_palliatus
ENSLAFG00000017588	SNRPB	99	96.053	ENSCGRG00001023046	Snrpb	99	96.053	Cricetulus_griseus_chok1gshd
ENSLAFG00000017588	SNRPB	96	98.140	ENSCGRG00000010423	Snrpb	96	98.140	Cricetulus_griseus_crigri
ENSLAFG00000017588	SNRPB	78	88.462	ENSCSEG00000020328	snrpb	69	89.820	Cynoglossus_semilaevis
ENSLAFG00000017588	SNRPB	71	88.024	ENSDARG00000011125	snrpb	75	90.110	Danio_rerio
ENSLAFG00000017588	SNRPB	99	96.053	ENSDNOG00000015545	-	95	96.053	Dasypus_novemcinctus
ENSLAFG00000017588	SNRPB	95	91.818	ENSDNOG00000007896	-	91	91.818	Dasypus_novemcinctus
ENSLAFG00000017588	SNRPB	96	96.413	ENSDORG00000029558	Snrpb	97	96.413	Dipodomys_ordii
ENSLAFG00000017588	SNRPB	63	67.568	FBgn0262601	SmB	73	67.568	Drosophila_melanogaster
ENSLAFG00000017588	SNRPB	95	79.091	ENSETEG00000006830	SNRPB	96	79.091	Echinops_telfairi
ENSLAFG00000017588	SNRPB	79	74.595	ENSEBUG00000007467	SNRPB	62	83.784	Eptatretus_burgeri
ENSLAFG00000017588	SNRPB	99	95.614	ENSEASG00005012991	SNRPB	99	95.614	Equus_asinus_asinus
ENSLAFG00000017588	SNRPB	99	96.053	ENSECAG00000011944	SNRPB	99	96.053	Equus_caballus
ENSLAFG00000017588	SNRPB	97	96.000	ENSEEUG00000015568	SNRPB	79	96.000	Erinaceus_europaeus
ENSLAFG00000017588	SNRPB	61	90.972	ENSELUG00000014564	snrpb	71	88.889	Esox_lucius
ENSLAFG00000017588	SNRPB	99	96.053	ENSFCAG00000034090	-	99	96.053	Felis_catus
ENSLAFG00000017588	SNRPB	73	93.293	ENSFALG00000004866	SNRPB	88	93.659	Ficedula_albicollis
ENSLAFG00000017588	SNRPB	99	96.053	ENSFDAG00000009937	SNRPB	99	96.053	Fukomys_damarensis
ENSLAFG00000017588	SNRPB	77	91.061	ENSGALG00000035421	SNRPN	92	91.818	Gallus_gallus
ENSLAFG00000017588	SNRPB	74	88.953	ENSGAFG00000019558	snrpb	73	89.881	Gambusia_affinis
ENSLAFG00000017588	SNRPB	78	87.363	ENSGACG00000003262	snrpb	69	90.419	Gasterosteus_aculeatus
ENSLAFG00000017588	SNRPB	95	92.273	ENSGAGG00000001308	SNRPB	92	92.273	Gopherus_agassizii
ENSLAFG00000017588	SNRPB	99	96.053	ENSGGOG00000016138	SNRPB	99	96.053	Gorilla_gorilla
ENSLAFG00000017588	SNRPB	77	88.889	ENSHBUG00000008369	snrpb	69	90.419	Haplochromis_burtoni
ENSLAFG00000017588	SNRPB	63	85.811	ENSHGLG00000016505	-	71	85.811	Heterocephalus_glaber_female
ENSLAFG00000017588	SNRPB	99	96.053	ENSHGLG00000016241	-	99	96.053	Heterocephalus_glaber_female
ENSLAFG00000017588	SNRPB	99	96.053	ENSHGLG00100012877	-	99	96.053	Heterocephalus_glaber_male
ENSLAFG00000017588	SNRPB	63	85.811	ENSHGLG00100004178	-	71	85.811	Heterocephalus_glaber_male
ENSLAFG00000017588	SNRPB	78	89.011	ENSHCOG00000014888	snrpb	69	90.419	Hippocampus_comes
ENSLAFG00000017588	SNRPB	71	88.024	ENSIPUG00000024569	SNRPB	76	90.110	Ictalurus_punctatus
ENSLAFG00000017588	SNRPB	99	94.298	ENSSTOG00000033664	-	95	94.298	Ictidomys_tridecemlineatus
ENSLAFG00000017588	SNRPB	93	78.241	ENSSTOG00000027821	-	62	93.382	Ictidomys_tridecemlineatus
ENSLAFG00000017588	SNRPB	99	96.070	ENSJJAG00000024170	Snrpb	99	96.053	Jaculus_jaculus
ENSLAFG00000017588	SNRPB	73	89.474	ENSKMAG00000014494	snrpb	68	90.419	Kryptolebias_marmoratus
ENSLAFG00000017588	SNRPB	78	89.011	ENSLBEG00000005678	snrpb	69	90.419	Labrus_bergylta
ENSLAFG00000017588	SNRPB	95	89.091	ENSLACG00000011459	SNRPB	92	89.091	Latimeria_chalumnae
ENSLAFG00000017588	SNRPB	71	89.222	ENSLOCG00000002687	snrpb	76	90.659	Lepisosteus_oculatus
ENSLAFG00000017588	SNRPB	99	96.053	ENSMFAG00000038756	SNRPB	99	96.053	Macaca_fascicularis
ENSLAFG00000017588	SNRPB	99	96.053	ENSMMUG00000010050	SNRPB	99	96.053	Macaca_mulatta
ENSLAFG00000017588	SNRPB	99	96.053	ENSMNEG00000027954	SNRPB	99	96.053	Macaca_nemestrina
ENSLAFG00000017588	SNRPB	99	96.053	ENSMLEG00000022346	SNRPB	99	96.053	Mandrillus_leucophaeus
ENSLAFG00000017588	SNRPB	78	88.950	ENSMAMG00000009294	snrpb	67	90.476	Mastacembelus_armatus
ENSLAFG00000017588	SNRPB	77	88.889	ENSMZEG00005011856	snrpb	69	90.419	Maylandia_zebra
ENSLAFG00000017588	SNRPB	99	96.491	ENSMICG00000016519	SNRPB	99	96.491	Microcebus_murinus
ENSLAFG00000017588	SNRPB	97	83.036	ENSMICG00000015983	-	86	87.234	Microcebus_murinus
ENSLAFG00000017588	SNRPB	99	95.614	ENSMOCG00000002892	-	99	95.614	Microtus_ochrogaster
ENSLAFG00000017588	SNRPB	84	75.897	ENSMOCG00000021362	-	82	70.769	Microtus_ochrogaster
ENSLAFG00000017588	SNRPB	79	88.525	ENSMMOG00000013226	snrpb	71	90.476	Mola_mola
ENSLAFG00000017588	SNRPB	77	88.333	ENSMALG00000020839	snrpb	56	89.820	Monopterus_albus
ENSLAFG00000017588	SNRPB	99	95.614	MGP_CAROLIEiJ_G0024293	Snrpb	99	95.614	Mus_caroli
ENSLAFG00000017588	SNRPB	99	95.614	ENSMUSG00000027404	Snrpb	99	95.614	Mus_musculus
ENSLAFG00000017588	SNRPB	99	95.614	MGP_PahariEiJ_G0025738	Snrpb	99	95.614	Mus_pahari
ENSLAFG00000017588	SNRPB	99	95.614	MGP_SPRETEiJ_G0025213	Snrpb	99	95.614	Mus_spretus
ENSLAFG00000017588	SNRPB	99	96.053	ENSMPUG00000009283	SNRPB	99	96.053	Mustela_putorius_furo
ENSLAFG00000017588	SNRPB	99	93.860	ENSMLUG00000016951	SNRPB	95	93.860	Myotis_lucifugus
ENSLAFG00000017588	SNRPB	99	96.053	ENSNGAG00000012051	Snrpb	99	96.053	Nannospalax_galili
ENSLAFG00000017588	SNRPB	76	87.571	ENSNBRG00000006353	snrpb	62	89.024	Neolamprologus_brichardi
ENSLAFG00000017588	SNRPB	100	95.671	ENSNLEG00000029067	SNRPB	97	95.671	Nomascus_leucogenys
ENSLAFG00000017588	SNRPB	97	93.333	ENSMEUG00000015625	SNRPB	100	93.333	Notamacropus_eugenii
ENSLAFG00000017588	SNRPB	99	96.053	ENSODEG00000004305	-	99	96.053	Octodon_degus
ENSLAFG00000017588	SNRPB	81	89.894	ENSODEG00000016060	-	78	91.444	Octodon_degus
ENSLAFG00000017588	SNRPB	77	88.889	ENSONIG00000000248	snrpb	69	90.419	Oreochromis_niloticus
ENSLAFG00000017588	SNRPB	93	69.767	ENSOCUG00000026813	-	64	67.333	Oryctolagus_cuniculus
ENSLAFG00000017588	SNRPB	76	88.764	ENSOCUG00000022423	-	86	91.617	Oryctolagus_cuniculus
ENSLAFG00000017588	SNRPB	92	91.589	ENSOCUG00000021456	-	78	92.021	Oryctolagus_cuniculus
ENSLAFG00000017588	SNRPB	99	93.860	ENSOCUG00000028215	-	95	93.860	Oryctolagus_cuniculus
ENSLAFG00000017588	SNRPB	99	96.491	ENSOCUG00000014042	-	95	96.491	Oryctolagus_cuniculus
ENSLAFG00000017588	SNRPB	78	88.398	ENSORLG00000021862	snrpb	69	90.419	Oryzias_latipes
ENSLAFG00000017588	SNRPB	99	96.053	ENSOGAG00000016149	SNRPB	95	96.053	Otolemur_garnettii
ENSLAFG00000017588	SNRPB	99	96.491	ENSOARG00000006740	SNRPB	99	96.491	Ovis_aries
ENSLAFG00000017588	SNRPB	99	96.053	ENSPPAG00000036314	SNRPB	99	96.053	Pan_paniscus
ENSLAFG00000017588	SNRPB	99	96.053	ENSPPRG00000003233	-	99	96.053	Panthera_pardus
ENSLAFG00000017588	SNRPB	99	96.053	ENSPTIG00000007468	SNRPB	99	96.053	Panthera_tigris_altaica
ENSLAFG00000017588	SNRPB	99	96.053	ENSPTRG00000013176	SNRPB	99	96.053	Pan_troglodytes
ENSLAFG00000017588	SNRPB	99	96.070	ENSPANG00000020362	SNRPB	95	96.053	Papio_anubis
ENSLAFG00000017588	SNRPB	71	87.425	ENSPKIG00000002865	snrpb	69	89.222	Paramormyrops_kingsleyae
ENSLAFG00000017588	SNRPB	96	92.308	ENSPSIG00000014125	SNRPB	91	92.308	Pelodiscus_sinensis
ENSLAFG00000017588	SNRPB	76	86.517	ENSPMGG00000016349	snrpb	69	87.730	Periophthalmus_magnuspinnatus
ENSLAFG00000017588	SNRPB	99	96.053	ENSPEMG00000007948	Snrpb	99	96.053	Peromyscus_maniculatus_bairdii
ENSLAFG00000017588	SNRPB	99	93.450	ENSPCIG00000004694	SNRPB	95	93.450	Phascolarctos_cinereus
ENSLAFG00000017588	SNRPB	82	73.158	ENSPREG00000015515	snrpb	62	90.370	Poecilia_reticulata
ENSLAFG00000017588	SNRPB	99	96.053	ENSPPYG00000010841	SNRPB	99	96.053	Pongo_abelii
ENSLAFG00000017588	SNRPB	99	96.053	ENSPCOG00000013686	SNRPB	99	96.053	Propithecus_coquereli
ENSLAFG00000017588	SNRPB	98	94.690	ENSPVAG00000017013	SNRPB	79	94.690	Pteropus_vampyrus
ENSLAFG00000017588	SNRPB	77	88.889	ENSPNYG00000014788	snrpb	69	90.419	Pundamilia_nyererei
ENSLAFG00000017588	SNRPB	78	89.011	ENSPNAG00000016126	snrpb	76	90.659	Pygocentrus_nattereri
ENSLAFG00000017588	SNRPB	99	96.053	ENSRNOG00000006961	Snrpb	99	96.053	Rattus_norvegicus
ENSLAFG00000017588	SNRPB	99	95.614	ENSRBIG00000040505	SNRPB	99	95.614	Rhinopithecus_bieti
ENSLAFG00000017588	SNRPB	99	96.053	ENSRROG00000036094	SNRPB	99	96.053	Rhinopithecus_roxellana
ENSLAFG00000017588	SNRPB	99	96.053	ENSSBOG00000027310	SNRPB	99	96.053	Saimiri_boliviensis_boliviensis
ENSLAFG00000017588	SNRPB	99	94.298	ENSSHAG00000010394	SNRPB	95	94.298	Sarcophilus_harrisii
ENSLAFG00000017588	SNRPB	71	87.425	ENSSFOG00015002870	snrpb	76	89.011	Scleropages_formosus
ENSLAFG00000017588	SNRPB	78	88.462	ENSSMAG00000006766	snrpb	69	89.820	Scophthalmus_maximus
ENSLAFG00000017588	SNRPB	77	88.889	ENSSDUG00000018539	snrpb	69	90.419	Seriola_dumerili
ENSLAFG00000017588	SNRPB	77	88.889	ENSSLDG00000022391	snrpb	69	90.419	Seriola_lalandi_dorsalis
ENSLAFG00000017588	SNRPB	95	84.091	ENSSARG00000003084	SNRPB	94	84.091	Sorex_araneus
ENSLAFG00000017588	SNRPB	95	92.273	ENSSPUG00000015659	SNRPB	92	92.273	Sphenodon_punctatus
ENSLAFG00000017588	SNRPB	77	88.889	ENSSPAG00000021992	snrpb	69	90.419	Stegastes_partitus
ENSLAFG00000017588	SNRPB	99	96.507	ENSSSCG00000040857	-	99	96.491	Sus_scrofa
ENSLAFG00000017588	SNRPB	99	77.193	ENSSSCG00000011966	-	90	72.986	Sus_scrofa
ENSLAFG00000017588	SNRPB	76	75.141	ENSTGUG00000005684	SNRPB	59	90.714	Taeniopygia_guttata
ENSLAFG00000017588	SNRPB	78	87.912	ENSTRUG00000023094	snrpb	72	89.820	Takifugu_rubripes
ENSLAFG00000017588	SNRPB	78	87.912	ENSTNIG00000002991	snrpb	69	89.820	Tetraodon_nigroviridis
ENSLAFG00000017588	SNRPB	77	94.972	ENSUAMG00000005984	-	87	95.055	Ursus_americanus
ENSLAFG00000017588	SNRPB	58	93.431	ENSUMAG00000002123	-	63	93.431	Ursus_maritimus
ENSLAFG00000017588	SNRPB	97	75.664	ENSVVUG00000010086	-	84	76.410	Vulpes_vulpes
ENSLAFG00000017588	SNRPB	99	95.614	ENSVVUG00000025654	-	95	95.614	Vulpes_vulpes
ENSLAFG00000017588	SNRPB	95	91.364	ENSXETG00000027266	snrpb	71	90.533	Xenopus_tropicalis
ENSLAFG00000017588	SNRPB	73	74.854	ENSXMAG00000028767	snrpb	58	90.370	Xiphophorus_maculatus