EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000017886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 3807 bases
Position: chrscaffold_1:100500977-100504783
Accession: 100670192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000014998	Nop16	PF09420.10	4.2e-22	1	2
ENSLAFP00000014998	Nop16	PF09420.10	4.2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000017889	-	534	-	ENSLAFP00000014998	177 (aa)	XP_003404724	G3TJR4

Gene Model

Click here to download ENSLAFG00000017886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000017886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000017886	-	95	52.663	ENSAPOG00000010682	-	96	52.663	Acanthochromis_polyacanthus
ENSLAFG00000017886	-	100	95.506	ENSAMEG00000006988	-	100	95.506	Ailuropoda_melanoleuca
ENSLAFG00000017886	-	95	53.846	ENSACIG00000019263	nop16	95	53.846	Amphilophus_citrinellus
ENSLAFG00000017886	-	98	51.724	ENSAOCG00000005504	nop16	96	52.663	Amphiprion_ocellaris
ENSLAFG00000017886	-	98	51.724	ENSAPEG00000006605	nop16	96	52.663	Amphiprion_percula
ENSLAFG00000017886	-	95	54.438	ENSATEG00000014089	nop16	95	54.438	Anabas_testudineus
ENSLAFG00000017886	-	99	71.023	ENSACAG00000006333	-	99	71.023	Anolis_carolinensis
ENSLAFG00000017886	-	100	90.449	ENSANAG00000015743	-	100	90.449	Aotus_nancymaae
ENSLAFG00000017886	-	100	83.708	ENSANAG00000027410	-	100	83.708	Aotus_nancymaae
ENSLAFG00000017886	-	95	54.438	ENSACLG00000025227	nop16	95	54.438	Astatotilapia_calliptera
ENSLAFG00000017886	-	94	46.386	ENSAMXG00000006843	nop16	95	46.386	Astyanax_mexicanus
ENSLAFG00000017886	-	100	94.382	ENSBTAG00000010734	NOP16	100	94.382	Bos_taurus
ENSLAFG00000017886	-	66	31.655	WBGene00013958	ZK265.6	80	30.000	Caenorhabditis_elegans
ENSLAFG00000017886	-	100	94.382	ENSCAFG00000016694	NOP16	100	94.382	Canis_familiaris
ENSLAFG00000017886	-	99	94.318	ENSCAFG00020011505	-	94	94.318	Canis_lupus_dingo
ENSLAFG00000017886	-	100	94.382	ENSCHIG00000022082	-	100	94.382	Capra_hircus
ENSLAFG00000017886	-	100	75.843	ENSTSYG00000032690	-	100	75.843	Carlito_syrichta
ENSLAFG00000017886	-	99	92.655	ENSTSYG00000030409	-	99	92.655	Carlito_syrichta
ENSLAFG00000017886	-	100	91.573	ENSCPOG00000026072	-	100	91.573	Cavia_porcellus
ENSLAFG00000017886	-	90	87.500	ENSCCAG00000026775	-	93	87.500	Cebus_capucinus
ENSLAFG00000017886	-	100	91.573	ENSCLAG00000015405	-	100	91.573	Chinchilla_lanigera
ENSLAFG00000017886	-	100	92.697	ENSCSAG00000009400	-	100	92.697	Chlorocebus_sabaeus
ENSLAFG00000017886	-	99	73.596	ENSCPBG00000022647	-	99	73.596	Chrysemys_picta_bellii
ENSLAFG00000017886	-	96	44.571	ENSCING00000006179	-	94	44.571	Ciona_intestinalis
ENSLAFG00000017886	-	95	42.012	ENSCSAVG00000000269	-	93	42.012	Ciona_savignyi
ENSLAFG00000017886	-	100	89.888	ENSCGRG00001004259	Nop16	100	89.888	Cricetulus_griseus_chok1gshd
ENSLAFG00000017886	-	100	89.888	ENSCGRG00000010975	Nop16	100	89.888	Cricetulus_griseus_crigri
ENSLAFG00000017886	-	95	51.479	ENSCSEG00000020523	nop16	97	51.479	Cynoglossus_semilaevis
ENSLAFG00000017886	-	95	53.846	ENSCVAG00000020140	nop16	95	53.846	Cyprinodon_variegatus
ENSLAFG00000017886	-	98	50.289	ENSDARG00000044402	nop16	99	50.289	Danio_rerio
ENSLAFG00000017886	-	100	96.045	ENSDNOG00000042890	-	100	96.045	Dasypus_novemcinctus
ENSLAFG00000017886	-	100	89.326	ENSDORG00000008872	Nop16	100	89.326	Dipodomys_ordii
ENSLAFG00000017886	-	93	44.509	ENSEBUG00000011196	nop16	95	44.509	Eptatretus_burgeri
ENSLAFG00000017886	-	100	95.506	ENSEASG00005011988	-	100	95.506	Equus_asinus_asinus
ENSLAFG00000017886	-	100	96.629	ENSECAG00000021354	NOP16	100	96.629	Equus_caballus
ENSLAFG00000017886	-	98	54.286	ENSELUG00000000401	nop16	98	54.286	Esox_lucius
ENSLAFG00000017886	-	100	94.944	ENSFCAG00000025473	-	100	94.944	Felis_catus
ENSLAFG00000017886	-	100	67.222	ENSFALG00000008553	-	100	67.222	Ficedula_albicollis
ENSLAFG00000017886	-	100	92.135	ENSFDAG00000000193	-	100	92.135	Fukomys_damarensis
ENSLAFG00000017886	-	95	54.438	ENSFHEG00000016452	nop16	95	54.438	Fundulus_heteroclitus
ENSLAFG00000017886	-	100	72.778	ENSGALG00000003355	-	100	72.778	Gallus_gallus
ENSLAFG00000017886	-	82	53.425	ENSGAFG00000011616	nop16	79	53.425	Gambusia_affinis
ENSLAFG00000017886	-	95	53.529	ENSGACG00000002618	-	98	53.529	Gasterosteus_aculeatus
ENSLAFG00000017886	-	95	48.521	ENSGACG00000020810	nop16	100	48.521	Gasterosteus_aculeatus
ENSLAFG00000017886	-	95	52.071	ENSGACG00000020819	-	98	52.071	Gasterosteus_aculeatus
ENSLAFG00000017886	-	95	52.326	ENSGACG00000003122	-	97	54.386	Gasterosteus_aculeatus
ENSLAFG00000017886	-	95	53.846	ENSHBUG00000013527	nop16	95	53.846	Haplochromis_burtoni
ENSLAFG00000017886	-	100	92.697	ENSHGLG00000013437	NOP16	100	92.697	Heterocephalus_glaber_female
ENSLAFG00000017886	-	100	92.697	ENSHGLG00100011375	NOP16	100	92.697	Heterocephalus_glaber_male
ENSLAFG00000017886	-	95	49.704	ENSHCOG00000019999	nop16	97	49.704	Hippocampus_comes
ENSLAFG00000017886	-	94	49.398	ENSIPUG00000006682	nop16	95	49.398	Ictalurus_punctatus
ENSLAFG00000017886	-	100	93.889	ENSSTOG00000004869	-	100	93.889	Ictidomys_tridecemlineatus
ENSLAFG00000017886	-	100	91.573	ENSJJAG00000017655	Nop16	100	91.573	Jaculus_jaculus
ENSLAFG00000017886	-	95	55.030	ENSKMAG00000006164	nop16	95	55.030	Kryptolebias_marmoratus
ENSLAFG00000017886	-	95	52.663	ENSLBEG00000018355	nop16	78	52.663	Labrus_bergylta
ENSLAFG00000017886	-	99	62.712	ENSLACG00000014884	nop16	100	62.712	Latimeria_chalumnae
ENSLAFG00000017886	-	95	59.412	ENSLOCG00000012348	nop16	94	59.412	Lepisosteus_oculatus
ENSLAFG00000017886	-	95	55.621	ENSMAMG00000021868	nop16	95	55.621	Mastacembelus_armatus
ENSLAFG00000017886	-	95	54.438	ENSMZEG00005012112	nop16	95	54.438	Maylandia_zebra
ENSLAFG00000017886	-	55	72.165	ENSMGAG00000004726	-	95	72.165	Meleagris_gallopavo
ENSLAFG00000017886	-	59	86.792	ENSMAUG00000009852	-	100	86.792	Mesocricetus_auratus
ENSLAFG00000017886	-	94	80.952	ENSMAUG00000015569	-	99	80.952	Mesocricetus_auratus
ENSLAFG00000017886	-	100	90.449	ENSMOCG00000020788	Nop16	100	90.449	Microtus_ochrogaster
ENSLAFG00000017886	-	95	53.846	ENSMMOG00000016054	nop16	99	53.846	Mola_mola
ENSLAFG00000017886	-	100	81.111	ENSMODG00000005214	-	100	81.111	Monodelphis_domestica
ENSLAFG00000017886	-	95	50.888	ENSMALG00000021263	nop16	95	50.888	Monopterus_albus
ENSLAFG00000017886	-	100	91.573	MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	Mus_caroli
ENSLAFG00000017886	-	100	92.135	ENSMUSG00000025869	Nop16	100	92.135	Mus_musculus
ENSLAFG00000017886	-	100	91.011	MGP_PahariEiJ_G0019603	Nop16	100	91.011	Mus_pahari
ENSLAFG00000017886	-	100	91.573	MGP_SPRETEiJ_G0019418	Nop16	100	91.573	Mus_spretus
ENSLAFG00000017886	-	100	95.506	ENSMPUG00000012552	-	100	95.506	Mustela_putorius_furo
ENSLAFG00000017886	-	100	91.573	ENSMPUG00000016964	-	100	91.573	Mustela_putorius_furo
ENSLAFG00000017886	-	99	91.477	ENSMLUG00000003504	-	99	91.477	Myotis_lucifugus
ENSLAFG00000017886	-	100	92.135	ENSNGAG00000018045	Nop16	100	92.135	Nannospalax_galili
ENSLAFG00000017886	-	95	53.254	ENSNBRG00000015181	nop16	96	53.254	Neolamprologus_brichardi
ENSLAFG00000017886	-	100	91.573	ENSODEG00000009586	-	100	91.573	Octodon_degus
ENSLAFG00000017886	-	95	56.213	ENSONIG00000016417	nop16	95	56.213	Oreochromis_niloticus
ENSLAFG00000017886	-	100	91.573	ENSOCUG00000013171	-	100	91.573	Oryctolagus_cuniculus
ENSLAFG00000017886	-	95	55.621	ENSORLG00000026611	nop16	95	55.621	Oryzias_latipes
ENSLAFG00000017886	-	95	58.580	ENSOMEG00000023001	nop16	95	58.580	Oryzias_melastigma
ENSLAFG00000017886	-	100	94.382	ENSOGAG00000000824	-	100	94.382	Otolemur_garnettii
ENSLAFG00000017886	-	100	94.382	ENSOARG00000002165	-	100	94.382	Ovis_aries
ENSLAFG00000017886	-	100	92.697	ENSPPAG00000035473	-	100	92.697	Pan_paniscus
ENSLAFG00000017886	-	100	94.944	ENSPPRG00000016600	-	100	94.944	Panthera_pardus
ENSLAFG00000017886	-	100	94.382	ENSPTIG00000011708	-	100	94.382	Panthera_tigris_altaica
ENSLAFG00000017886	-	100	92.697	ENSPTRG00000017560	NOP16	100	92.697	Pan_troglodytes
ENSLAFG00000017886	-	99	53.409	ENSPKIG00000009587	nop16	99	53.409	Paramormyrops_kingsleyae
ENSLAFG00000017886	-	79	67.606	ENSPSIG00000013546	-	99	67.606	Pelodiscus_sinensis
ENSLAFG00000017886	-	93	54.023	ENSPMGG00000003443	nop16	98	54.023	Periophthalmus_magnuspinnatus
ENSLAFG00000017886	-	100	90.449	ENSPEMG00000020268	Nop16	100	90.449	Peromyscus_maniculatus_bairdii
ENSLAFG00000017886	-	100	83.333	ENSPCIG00000009782	-	100	83.333	Phascolarctos_cinereus
ENSLAFG00000017886	-	95	52.663	ENSPFOG00000010549	nop16	95	52.663	Poecilia_formosa
ENSLAFG00000017886	-	77	52.518	ENSPLAG00000007124	nop16	70	52.518	Poecilia_latipinna
ENSLAFG00000017886	-	95	52.663	ENSPMEG00000008611	nop16	95	52.663	Poecilia_mexicana
ENSLAFG00000017886	-	95	52.663	ENSPREG00000012940	nop16	95	52.663	Poecilia_reticulata
ENSLAFG00000017886	-	99	92.655	ENSPPYG00000016070	-	99	92.655	Pongo_abelii
ENSLAFG00000017886	-	95	54.438	ENSPNYG00000013529	nop16	95	54.438	Pundamilia_nyererei
ENSLAFG00000017886	-	93	49.091	ENSPNAG00000016233	nop16	95	49.091	Pygocentrus_nattereri
ENSLAFG00000017886	-	100	90.449	ENSRNOG00000017284	Nop16	100	90.449	Rattus_norvegicus
ENSLAFG00000017886	-	100	82.682	ENSSHAG00000001724	-	100	82.682	Sarcophilus_harrisii
ENSLAFG00000017886	-	90	52.830	ENSSFOG00015010537	nop16	77	52.047	Scleropages_formosus
ENSLAFG00000017886	-	95	53.254	ENSSDUG00000022349	nop16	95	53.254	Seriola_dumerili
ENSLAFG00000017886	-	95	53.846	ENSSLDG00000025171	nop16	95	53.846	Seriola_lalandi_dorsalis
ENSLAFG00000017886	-	73	76.923	ENSSARG00000006699	-	61	76.923	Sorex_araneus
ENSLAFG00000017886	-	99	71.591	ENSSPUG00000006508	-	98	71.591	Sphenodon_punctatus
ENSLAFG00000017886	-	95	55.030	ENSSPAG00000011772	nop16	95	55.030	Stegastes_partitus
ENSLAFG00000017886	-	100	91.573	ENSSSCG00000029577	-	100	91.573	Sus_scrofa
ENSLAFG00000017886	-	100	71.667	ENSTGUG00000000543	-	100	71.667	Taeniopygia_guttata
ENSLAFG00000017886	-	95	52.663	ENSTRUG00000020255	nop16	95	52.663	Takifugu_rubripes
ENSLAFG00000017886	-	95	54.438	ENSTNIG00000007616	nop16	95	54.438	Tetraodon_nigroviridis
ENSLAFG00000017886	-	100	94.944	ENSUAMG00000005139	-	100	94.944	Ursus_americanus
ENSLAFG00000017886	-	99	94.886	ENSVVUG00000001697	-	94	94.886	Vulpes_vulpes
ENSLAFG00000017886	-	92	56.790	ENSXETG00000022342	nop16	95	56.790	Xenopus_tropicalis
ENSLAFG00000017886	-	95	53.254	ENSXCOG00000018829	nop16	97	53.254	Xiphophorus_couchianus
ENSLAFG00000017886	-	95	53.846	ENSXMAG00000029113	nop16	95	53.846	Xiphophorus_maculatus