EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018009 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 2971 bases
Position: chrscaffold_2:45353289-45356259
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015098	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018008	RAB5B-201	690	-	ENSLAFP00000015098	229 (aa)	-	G3TJZ6

Gene Model

Click here to download ENSLAFG00000018009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018009	RAB5B	88	34.951	ENSLAFG00000022900	RAB9A	99	34.951
ENSLAFG00000018009	RAB5B	85	34.975	ENSLAFG00000000166	RAB9B	97	34.975
ENSLAFG00000018009	RAB5B	72	32.927	ENSLAFG00000000202	-	93	32.927
ENSLAFG00000018009	RAB5B	86	47.959	ENSLAFG00000003688	RAB22A	98	47.959
ENSLAFG00000018009	RAB5B	76	41.758	ENSLAFG00000015582	RAB18	85	42.458
ENSLAFG00000018009	RAB5B	78	44.693	ENSLAFG00000021408	RAB1B	87	44.693
ENSLAFG00000018009	RAB5B	73	42.442	ENSLAFG00000007945	RAB7A	82	42.442
ENSLAFG00000018009	RAB5B	59	30.556	ENSLAFG00000007764	ARL8B	73	30.556
ENSLAFG00000018009	RAB5B	71	46.626	ENSLAFG00000011418	RAB11A	75	46.626
ENSLAFG00000018009	RAB5B	76	36.994	ENSLAFG00000023194	RAB15	81	36.994
ENSLAFG00000018009	RAB5B	73	45.238	ENSLAFG00000009905	RAB6B	88	45.238
ENSLAFG00000018009	RAB5B	95	81.106	ENSLAFG00000008321	RAB5A	100	81.106
ENSLAFG00000018009	RAB5B	74	30.857	ENSLAFG00000001217	RERG	84	30.857
ENSLAFG00000018009	RAB5B	78	39.247	ENSLAFG00000022351	RAB33B	79	39.247
ENSLAFG00000018009	RAB5B	74	42.353	ENSLAFG00000010711	RAB30	83	42.353
ENSLAFG00000018009	RAB5B	71	42.945	ENSLAFG00000015567	RAB2A	76	42.945
ENSLAFG00000018009	RAB5B	72	31.737	ENSLAFG00000029239	KRAS	90	30.636
ENSLAFG00000018009	RAB5B	71	44.785	ENSLAFG00000009222	RAB25	76	44.785
ENSLAFG00000018009	RAB5B	71	44.172	ENSLAFG00000005250	RAB14	75	44.172
ENSLAFG00000018009	RAB5B	55	36.434	ENSLAFG00000016780	-	88	36.434
ENSLAFG00000018009	RAB5B	56	30.435	ENSLAFG00000028097	ARL4C	67	30.435
ENSLAFG00000018009	RAB5B	78	32.402	ENSLAFG00000000691	RHEB	93	32.402
ENSLAFG00000018009	RAB5B	86	43.269	ENSLAFG00000013598	RAB11B	94	43.269
ENSLAFG00000018009	RAB5B	79	37.297	ENSLAFG00000008832	RAB33A	77	37.297
ENSLAFG00000018009	RAB5B	65	33.775	ENSLAFG00000009693	RAB36	56	33.775
ENSLAFG00000018009	RAB5B	74	35.465	ENSLAFG00000030959	RAB39B	80	35.465
ENSLAFG00000018009	RAB5B	68	36.250	ENSLAFG00000028984	-	77	36.250
ENSLAFG00000018009	RAB5B	71	37.654	ENSLAFG00000007209	RAB23	67	37.654
ENSLAFG00000018009	RAB5B	85	42.929	ENSLAFG00000016666	RAB1A	95	42.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018009	RAB5B	95	99.078	ENSG00000111540	RAB5B	100	99.078	Homo_sapiens
ENSLAFG00000018009	RAB5B	95	99.539	ENSAMEG00000003196	RAB5B	100	99.539	Ailuropoda_melanoleuca
ENSLAFG00000018009	RAB5B	95	95.392	ENSACAG00000005380	RAB5B	100	95.392	Anolis_carolinensis
ENSLAFG00000018009	RAB5B	99	98.684	ENSANAG00000033215	RAB5B	99	98.684	Aotus_nancymaae
ENSLAFG00000018009	RAB5B	95	98.618	ENSBTAG00000014129	RAB5B	100	98.618	Bos_taurus
ENSLAFG00000018009	RAB5B	99	98.684	ENSCJAG00000041780	RAB5B	99	98.684	Callithrix_jacchus
ENSLAFG00000018009	RAB5B	95	99.078	ENSCAFG00000000087	RAB5B	100	99.078	Canis_familiaris
ENSLAFG00000018009	RAB5B	95	99.078	ENSCAFG00020026094	RAB5B	100	99.078	Canis_lupus_dingo
ENSLAFG00000018009	RAB5B	92	99.048	ENSCHIG00000010333	RAB5B	96	99.048	Capra_hircus
ENSLAFG00000018009	RAB5B	95	98.618	ENSTSYG00000009576	RAB5B	100	98.618	Carlito_syrichta
ENSLAFG00000018009	RAB5B	95	99.078	ENSCPOG00000034818	RAB5B	100	99.078	Cavia_porcellus
ENSLAFG00000018009	RAB5B	95	98.157	ENSCCAG00000019480	RAB5B	100	98.157	Cebus_capucinus
ENSLAFG00000018009	RAB5B	79	98.343	ENSCATG00000034978	RAB5B	98	98.343	Cercocebus_atys
ENSLAFG00000018009	RAB5B	95	98.157	ENSCSAG00000005277	RAB5B	100	98.157	Chlorocebus_sabaeus
ENSLAFG00000018009	RAB5B	95	95.392	ENSCPBG00000012712	RAB5B	100	95.392	Chrysemys_picta_bellii
ENSLAFG00000018009	RAB5B	95	98.618	ENSCGRG00001000428	Rab5b	100	98.618	Cricetulus_griseus_chok1gshd
ENSLAFG00000018009	RAB5B	95	98.618	ENSCGRG00000009508	-	100	98.618	Cricetulus_griseus_crigri
ENSLAFG00000018009	RAB5B	95	99.078	ENSDORG00000025063	Rab5b	100	99.078	Dipodomys_ordii
ENSLAFG00000018009	RAB5B	95	98.618	ENSECAG00000023306	RAB5B	100	98.618	Equus_caballus
ENSLAFG00000018009	RAB5B	95	98.157	ENSEEUG00000006745	RAB5B	100	98.157	Erinaceus_europaeus
ENSLAFG00000018009	RAB5B	95	99.078	ENSFDAG00000008326	RAB5B	100	99.078	Fukomys_damarensis
ENSLAFG00000018009	RAB5B	95	98.157	ENSHGLG00000005995	RAB5B	100	98.157	Heterocephalus_glaber_female
ENSLAFG00000018009	RAB5B	95	98.157	ENSHGLG00100012955	RAB5B	100	98.157	Heterocephalus_glaber_male
ENSLAFG00000018009	RAB5B	95	97.696	ENSSTOG00000010536	RAB5B	100	97.696	Ictidomys_tridecemlineatus
ENSLAFG00000018009	RAB5B	95	98.618	ENSJJAG00000019506	Rab5b	100	98.618	Jaculus_jaculus
ENSLAFG00000018009	RAB5B	95	98.157	ENSMFAG00000029992	RAB5B	100	98.157	Macaca_fascicularis
ENSLAFG00000018009	RAB5B	95	98.157	ENSMMUG00000031853	RAB5B	100	98.157	Macaca_mulatta
ENSLAFG00000018009	RAB5B	95	98.157	ENSMNEG00000005338	RAB5B	100	98.157	Macaca_nemestrina
ENSLAFG00000018009	RAB5B	95	98.157	ENSMLEG00000034462	RAB5B	100	98.157	Mandrillus_leucophaeus
ENSLAFG00000018009	RAB5B	95	99.078	ENSMAUG00000011613	Rab5b	100	99.078	Mesocricetus_auratus
ENSLAFG00000018009	RAB5B	95	98.618	ENSMICG00000011086	RAB5B	100	98.618	Microcebus_murinus
ENSLAFG00000018009	RAB5B	95	99.078	ENSMUSG00000000711	Rab5b	100	99.078	Mus_musculus
ENSLAFG00000018009	RAB5B	95	99.078	MGP_PahariEiJ_G0031135	Rab5b	100	99.078	Mus_pahari
ENSLAFG00000018009	RAB5B	95	98.618	MGP_SPRETEiJ_G0016774	Rab5b	100	98.618	Mus_spretus
ENSLAFG00000018009	RAB5B	99	98.678	ENSMPUG00000000946	RAB5B	93	98.678	Mustela_putorius_furo
ENSLAFG00000018009	RAB5B	95	99.078	ENSNLEG00000017570	-	100	99.078	Nomascus_leucogenys
ENSLAFG00000018009	RAB5B	95	99.078	ENSOPRG00000007883	RAB5B	100	99.078	Ochotona_princeps
ENSLAFG00000018009	RAB5B	95	98.618	ENSODEG00000003860	RAB5B	100	98.618	Octodon_degus
ENSLAFG00000018009	RAB5B	99	99.123	ENSOCUG00000013895	RAB5B	99	99.123	Oryctolagus_cuniculus
ENSLAFG00000018009	RAB5B	99	99.123	ENSOARG00000010651	RAB5B	99	99.123	Ovis_aries
ENSLAFG00000018009	RAB5B	95	99.078	ENSPPAG00000035431	RAB5B	100	99.078	Pan_paniscus
ENSLAFG00000018009	RAB5B	99	99.123	ENSPTRG00000005071	RAB5B	99	99.123	Pan_troglodytes
ENSLAFG00000018009	RAB5B	94	97.222	ENSPANG00000021075	RAB5B	97	97.222	Papio_anubis
ENSLAFG00000018009	RAB5B	95	99.078	ENSPCOG00000016461	RAB5B	100	99.078	Propithecus_coquereli
ENSLAFG00000018009	RAB5B	95	98.157	ENSRNOG00000006130	Rab5b	100	98.157	Rattus_norvegicus
ENSLAFG00000018009	RAB5B	95	98.157	ENSRBIG00000013165	RAB5B	100	98.157	Rhinopithecus_bieti
ENSLAFG00000018009	RAB5B	95	98.157	ENSRROG00000037973	RAB5B	100	98.157	Rhinopithecus_roxellana
ENSLAFG00000018009	RAB5B	95	82.488	ENSSBOG00000035419	RAB5B	100	82.488	Saimiri_boliviensis_boliviensis
ENSLAFG00000018009	RAB5B	95	97.696	ENSSHAG00000007727	RAB5B	100	97.696	Sarcophilus_harrisii
ENSLAFG00000018009	RAB5B	95	99.078	ENSSARG00000006237	RAB5B	100	99.078	Sorex_araneus
ENSLAFG00000018009	RAB5B	95	95.392	ENSSPUG00000014873	RAB5B	100	95.392	Sphenodon_punctatus
ENSLAFG00000018009	RAB5B	95	99.078	ENSTTRG00000015001	RAB5B	100	99.078	Tursiops_truncatus
ENSLAFG00000018009	RAB5B	95	98.618	ENSUAMG00000014651	RAB5B	100	98.618	Ursus_americanus
ENSLAFG00000018009	RAB5B	95	98.618	ENSUMAG00000016263	RAB5B	100	98.618	Ursus_maritimus
ENSLAFG00000018009	RAB5B	65	98.649	ENSVVUG00000022054	RAB5B	81	98.649	Vulpes_vulpes