EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000018056 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
U2AF65
Full Name
-
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
19015 bases
Position
chrscaffold_4:16889151-16908165
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000028336RRM_1PF00076.229.6e-3513
ENSLAFP00000028336RRM_1PF00076.229.6e-3523
ENSLAFP00000028336RRM_1PF00076.229.6e-3533
ENSLAFP00000015135RRM_1PF00076.221e-3413
ENSLAFP00000015135RRM_1PF00076.221e-3423
ENSLAFP00000015135RRM_1PF00076.221e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000029185-1416-ENSLAFP00000028336471 (aa)-G3UKH7
ENSLAFT00000018057-1425-ENSLAFP00000015135475 (aa)-G3TK21
Gene Model
Click here to download ENSLAFG00000018056's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018056's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000018056-6137.255ENSLAFG00000022929PUF605835.294
ENSLAFG00000018056-10085.350ENSLAFG00000028496-10085.350
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000018056-10099.368ENSG00000063244U2AF2100100.000Homo_sapiens
ENSLAFG00000018056-6589.783ENSAPOG00000023155u2af2a10089.783Acanthochromis_polyacanthus
ENSLAFG00000018056-9975.957ENSAPOG00000002208-10072.979Acanthochromis_polyacanthus
ENSLAFG00000018056-8896.875ENSAMEG00000003864U2AF210096.875Ailuropoda_melanoleuca
ENSLAFG00000018056-8395.630ENSACIG00000005749u2af2a9295.178Amphilophus_citrinellus
ENSLAFG00000018056-9674.946ENSACIG00000014173-8879.218Amphilophus_citrinellus
ENSLAFG00000018056-9989.809ENSAOCG00000015571u2af2a10089.809Amphiprion_ocellaris
ENSLAFG00000018056-9976.383ENSAOCG00000003595-10073.404Amphiprion_ocellaris
ENSLAFG00000018056-9675.991ENSAPEG00000020062-8581.000Amphiprion_percula
ENSLAFG00000018056-8395.373ENSAPEG00000009376u2af2a9394.924Amphiprion_percula
ENSLAFG00000018056-10089.619ENSATEG00000022332u2af2a10089.619Anabas_testudineus
ENSLAFG00000018056-9676.872ENSATEG00000020577-8781.500Anabas_testudineus
ENSLAFG00000018056-10096.421ENSACAG00000015489U2AF210096.421Anolis_carolinensis
ENSLAFG00000018056-10097.245ENSANAG00000028042U2AF210097.245Aotus_nancymaae
ENSLAFG00000018056-10090.042ENSACLG00000022181u2af2a10090.042Astatotilapia_calliptera
ENSLAFG00000018056-9976.383ENSACLG00000020793-10073.404Astatotilapia_calliptera
ENSLAFG00000018056-9985.987ENSAMXG00000039454u2af2b9985.987Astyanax_mexicanus
ENSLAFG00000018056-10085.031ENSAMXG00000033347u2af2a10084.855Astyanax_mexicanus
ENSLAFG00000018056-10098.947ENSBTAG00000002830U2AF210098.947Bos_taurus
ENSLAFG00000018056-9157.176WBGene00006697uaf-110056.081Caenorhabditis_elegans
ENSLAFG00000018056-10099.368ENSCJAG00000017128U2AF210099.368Callithrix_jacchus
ENSLAFG00000018056-10098.737ENSCAFG00000002551U2AF210098.737Canis_familiaris
ENSLAFG00000018056-9795.680ENSCAFG00020015445U2AF29795.680Canis_lupus_dingo
ENSLAFG00000018056-8583.538ENSCHIG00000023595U2AF28982.767Capra_hircus
ENSLAFG00000018056-10099.368ENSTSYG00000007432U2AF210099.368Carlito_syrichta
ENSLAFG00000018056-9699.127ENSCAPG00000008466U2AF210099.127Cavia_aperea
ENSLAFG00000018056-10099.158ENSCPOG00000001582U2AF210099.158Cavia_porcellus
ENSLAFG00000018056-10099.368ENSCCAG00000023336U2AF210099.368Cebus_capucinus
ENSLAFG00000018056-10098.737ENSCATG00000004637U2AF210098.737Cercocebus_atys
ENSLAFG00000018056-10098.737ENSCLAG00000000596U2AF210098.737Chinchilla_lanigera
ENSLAFG00000018056-10098.737ENSCSAG00000001722U2AF210098.737Chlorocebus_sabaeus
ENSLAFG00000018056-9693.492ENSCPBG00000004485U2AF210099.674Chrysemys_picta_bellii
ENSLAFG00000018056-8369.975ENSCING00000003455-8468.856Ciona_intestinalis
ENSLAFG00000018056-8368.939ENSCSAVG00000006813-9065.330Ciona_savignyi
ENSLAFG00000018056-10091.004ENSCANG00000043845-10091.423Colobus_angolensis_palliatus
ENSLAFG00000018056-9198.380ENSCANG00000031002-9698.380Colobus_angolensis_palliatus
ENSLAFG00000018056-10099.579ENSCGRG00001003185-10099.579Cricetulus_griseus_chok1gshd
ENSLAFG00000018056-9987.342ENSCGRG00001007486-9986.920Cricetulus_griseus_chok1gshd
ENSLAFG00000018056-9987.342ENSCGRG00000018587-9986.920Cricetulus_griseus_crigri
ENSLAFG00000018056-9973.305ENSCSEG00000020504-8878.894Cynoglossus_semilaevis
ENSLAFG00000018056-7391.083ENSCSEG00000018709u2af2a8291.083Cynoglossus_semilaevis
ENSLAFG00000018056-9976.596ENSCVAG00000023307-10073.617Cyprinodon_variegatus
ENSLAFG00000018056-10089.619ENSCVAG00000001259u2af2a10089.619Cyprinodon_variegatus
ENSLAFG00000018056-10085.804ENSDARG00000011740u2af2b10085.177Danio_rerio
ENSLAFG00000018056-10086.526ENSDARG00000012505u2af2a10086.709Danio_rerio
ENSLAFG00000018056-9198.380ENSDNOG00000047039U2AF29698.380Dasypus_novemcinctus
ENSLAFG00000018056-10099.368ENSDORG00000003250U2af210099.368Dipodomys_ordii
ENSLAFG00000018056-8272.890FBgn0005411U2af5010072.776Drosophila_melanogaster
ENSLAFG00000018056-8153.202FBgn0034834LS28553.904Drosophila_melanogaster
ENSLAFG00000018056-9159.815ENSEBUG00000001732U2AF29062.808Eptatretus_burgeri
ENSLAFG00000018056-9074.824ENSEBUG00000010917U2AF28976.284Eptatretus_burgeri
ENSLAFG00000018056-9796.732ENSEASG00005020708U2AF29096.732Equus_asinus_asinus
ENSLAFG00000018056-10096.603ENSECAG00000010110U2AF210096.603Equus_caballus
ENSLAFG00000018056-10082.600ENSELUG00000022291u2af2b10083.368Esox_lucius
ENSLAFG00000018056-9975.532ENSELUG00000018459-10071.915Esox_lucius
ENSLAFG00000018056-10087.708ENSELUG00000015850u2af2a10087.917Esox_lucius
ENSLAFG00000018056-10099.368ENSFCAG00000011504U2AF210099.368Felis_catus
ENSLAFG00000018056-9997.441ENSFDAG00000011264U2AF29997.441Fukomys_damarensis
ENSLAFG00000018056-10088.983ENSFHEG00000016025u2af2a10088.983Fundulus_heteroclitus
ENSLAFG00000018056-10087.738ENSGMOG00000004535u2af2a10087.395Gadus_morhua
ENSLAFG00000018056-9895.671ENSGALG00000052748U2AF26595.671Gallus_gallus
ENSLAFG00000018056-9974.894ENSGAFG00000005628-10072.979Gambusia_affinis
ENSLAFG00000018056-10089.619ENSGAFG00000013626u2af2a8889.619Gambusia_affinis
ENSLAFG00000018056-10088.559ENSGACG00000010632U2AF210088.584Gasterosteus_aculeatus
ENSLAFG00000018056-9975.789ENSGACG00000014500-10074.473Gasterosteus_aculeatus
ENSLAFG00000018056-6599.674ENSGAGG00000011849U2AF210099.674Gopherus_agassizii
ENSLAFG00000018056-5589.494ENSGGOG00000036399-9689.494Gorilla_gorilla
ENSLAFG00000018056-9976.383ENSHBUG00000017424-10073.404Haplochromis_burtoni
ENSLAFG00000018056-10090.042ENSHBUG00000013935u2af2a10090.042Haplochromis_burtoni
ENSLAFG00000018056-10099.368ENSHGLG00000005889U2AF210099.368Heterocephalus_glaber_female
ENSLAFG00000018056-9699.345ENSHGLG00100004757U2AF210099.345Heterocephalus_glaber_male
ENSLAFG00000018056-10087.265ENSHCOG00000019367u2af2a10087.474Hippocampus_comes
ENSLAFG00000018056-10084.778ENSIPUG00000007717u2af2a10084.810Ictalurus_punctatus
ENSLAFG00000018056-9985.565ENSIPUG00000009077u2af29985.356Ictalurus_punctatus
ENSLAFG00000018056-9973.830ENSIPUG00000009844-10070.000Ictalurus_punctatus
ENSLAFG00000018056-10099.368ENSSTOG00000019595U2AF210099.368Ictidomys_tridecemlineatus
ENSLAFG00000018056-10099.579ENSJJAG00000017705U2af210099.579Jaculus_jaculus
ENSLAFG00000018056-10089.407ENSKMAG00000005960u2af2a10089.407Kryptolebias_marmoratus
ENSLAFG00000018056-10089.407ENSLBEG00000016162u2af2a10089.407Labrus_bergylta
ENSLAFG00000018056-9673.650ENSLBEG00000005001-8878.240Labrus_bergylta
ENSLAFG00000018056-7898.638ENSLACG00000001648U2AF210098.638Latimeria_chalumnae
ENSLAFG00000018056-5996.014ENSLOCG00000008050u2af2b8096.043Lepisosteus_oculatus
ENSLAFG00000018056-9974.167ENSLOCG00000010843-10073.404Lepisosteus_oculatus
ENSLAFG00000018056-10099.368ENSMFAG00000038383U2AF210099.368Macaca_fascicularis
ENSLAFG00000018056-10099.158ENSMMUG00000004810U2AF210099.158Macaca_mulatta
ENSLAFG00000018056-10098.737ENSMNEG00000042096U2AF210098.737Macaca_nemestrina
ENSLAFG00000018056-9798.693ENSMLEG00000032219U2AF28998.693Mandrillus_leucophaeus
ENSLAFG00000018056-9974.043ENSMAMG00000020158-10072.340Mastacembelus_armatus
ENSLAFG00000018056-10088.075ENSMAMG00000019817u2af2a10088.075Mastacembelus_armatus
ENSLAFG00000018056-10090.042ENSMZEG00005016563u2af2a10090.042Maylandia_zebra
ENSLAFG00000018056-9976.383ENSMZEG00005023318-10073.404Maylandia_zebra
ENSLAFG00000018056-9898.710ENSMAUG00000008180U2af29998.710Mesocricetus_auratus
ENSLAFG00000018056-10098.737ENSMICG00000027681U2AF210098.737Microcebus_murinus
ENSLAFG00000018056-10099.579ENSMOCG00000013214-10099.579Microtus_ochrogaster
ENSLAFG00000018056-10088.632ENSMOCG00000007227-10086.316Microtus_ochrogaster
ENSLAFG00000018056-6596.743ENSMOCG00000001018-10096.743Microtus_ochrogaster
ENSLAFG00000018056-9968.041ENSMMOG00000000531-10067.076Mola_mola
ENSLAFG00000018056-8395.116ENSMMOG00000016600u2af2a9194.670Mola_mola
ENSLAFG00000018056-10088.983ENSMALG00000009985u2af2a10088.983Monopterus_albus
ENSLAFG00000018056-10099.579MGP_CAROLIEiJ_G0029150U2af210099.579Mus_caroli
ENSLAFG00000018056-10099.579ENSMUSG00000030435U2af2100100.000Mus_musculus
ENSLAFG00000018056-10099.579MGP_PahariEiJ_G0021017U2af210099.579Mus_pahari
ENSLAFG00000018056-10099.579MGP_SPRETEiJ_G0030203U2af210099.579Mus_spretus
ENSLAFG00000018056-10098.737ENSMPUG00000007135U2AF210098.737Mustela_putorius_furo
ENSLAFG00000018056-5196.266ENSMLUG00000011051-10096.266Myotis_lucifugus
ENSLAFG00000018056-10099.368ENSNGAG00000020369U2af210099.368Nannospalax_galili
ENSLAFG00000018056-9675.162ENSNBRG00000011100-8879.462Neolamprologus_brichardi
ENSLAFG00000018056-10090.042ENSNBRG00000002568u2af2a10090.042Neolamprologus_brichardi
ENSLAFG00000018056-10081.342ENSNLEG00000010562U2AF2100100.000Nomascus_leucogenys
ENSLAFG00000018056-8782.641ENSMEUG00000002346U2AF28983.333Notamacropus_eugenii
ENSLAFG00000018056-9968.008ENSODEG00000009254-10063.750Octodon_degus
ENSLAFG00000018056-10094.526ENSODEG00000012729-10094.526Octodon_degus
ENSLAFG00000018056-10090.063ENSONIG00000012793u2af2a10090.063Oreochromis_niloticus
ENSLAFG00000018056-9976.383ENSONIG00000009682-10073.404Oreochromis_niloticus
ENSLAFG00000018056-10087.686ENSORLG00000011545u2af2a10087.686Oryzias_latipes
ENSLAFG00000018056-10087.686ENSORLG00020006941u2af2a10087.686Oryzias_latipes_hni
ENSLAFG00000018056-10087.686ENSORLG00015012843u2af2a10087.686Oryzias_latipes_hsok
ENSLAFG00000018056-10089.384ENSOMEG00000011386u2af2a10088.960Oryzias_melastigma
ENSLAFG00000018056-10099.368ENSOGAG00000007206-10099.368Otolemur_garnettii
ENSLAFG00000018056-9855.745ENSOGAG00000034729-8063.978Otolemur_garnettii
ENSLAFG00000018056-10087.841ENSOARG00000001091U2AF210087.841Ovis_aries
ENSLAFG00000018056-10099.368ENSPPAG00000039782U2AF210099.368Pan_paniscus
ENSLAFG00000018056-10099.368ENSPPRG00000013843U2AF210099.368Panthera_pardus
ENSLAFG00000018056-9985.987ENSPTIG00000005489U2AF29092.995Panthera_tigris_altaica
ENSLAFG00000018056-10099.368ENSPTRG00000011523U2AF2100100.000Pan_troglodytes
ENSLAFG00000018056-10098.737ENSPANG00000008459U2AF210098.737Papio_anubis
ENSLAFG00000018056-10089.407ENSPKIG00000024346u2af2b9195.190Paramormyrops_kingsleyae
ENSLAFG00000018056-9977.754ENSPKIG00000014878-10074.255Paramormyrops_kingsleyae
ENSLAFG00000018056-9775.745ENSPSIG00000008014U2AF210075.745Pelodiscus_sinensis
ENSLAFG00000018056-8386.717ENSPMGG00000022980u2af2a9086.386Periophthalmus_magnuspinnatus
ENSLAFG00000018056-10099.579ENSPEMG00000007378U2af2100100.000Peromyscus_maniculatus_bairdii
ENSLAFG00000018056-8177.577ENSPMAG00000004097u2af2a8778.894Petromyzon_marinus
ENSLAFG00000018056-10098.316ENSPCIG00000018013U2AF210098.316Phascolarctos_cinereus
ENSLAFG00000018056-9989.597ENSPFOG00000010799u2af2a10089.597Poecilia_formosa
ENSLAFG00000018056-9975.319ENSPFOG00000006433-10073.404Poecilia_formosa
ENSLAFG00000018056-10089.619ENSPLAG00000014365u2af2a10089.619Poecilia_latipinna
ENSLAFG00000018056-8581.203ENSPLAG00000003275-8881.250Poecilia_latipinna
ENSLAFG00000018056-8580.952ENSPMEG00000003734-8881.000Poecilia_mexicana
ENSLAFG00000018056-10089.619ENSPMEG00000002969u2af2a10089.619Poecilia_mexicana
ENSLAFG00000018056-10089.619ENSPREG00000008739u2af2a10089.619Poecilia_reticulata
ENSLAFG00000018056-9974.894ENSPREG00000013036-10075.676Poecilia_reticulata
ENSLAFG00000018056-9296.751ENSPPYG00000010429-9596.751Pongo_abelii
ENSLAFG00000018056-10082.983ENSPCAG00000014399-10082.983Procavia_capensis
ENSLAFG00000018056-8682.178ENSPCAG00000003709-9882.957Procavia_capensis
ENSLAFG00000018056-10099.368ENSPCOG00000025870U2AF210099.368Propithecus_coquereli
ENSLAFG00000018056-10098.947ENSPVAG00000004540U2AF210098.947Pteropus_vampyrus
ENSLAFG00000018056-10090.042ENSPNYG00000001438u2af2a10090.042Pundamilia_nyererei
ENSLAFG00000018056-9976.383ENSPNYG00000011605-10073.404Pundamilia_nyererei
ENSLAFG00000018056-9976.596ENSPNAG00000007182-10073.404Pygocentrus_nattereri
ENSLAFG00000018056-10086.892ENSPNAG00000017620u2af2a10085.270Pygocentrus_nattereri
ENSLAFG00000018056-9987.049ENSPNAG00000027289u2af2b9986.837Pygocentrus_nattereri
ENSLAFG00000018056-10098.737ENSRNOG00000015914U2af210098.737Rattus_norvegicus
ENSLAFG00000018056-10099.158ENSRBIG00000041018U2AF210099.158Rhinopithecus_bieti
ENSLAFG00000018056-8799.034ENSRROG00000031103-10099.034Rhinopithecus_roxellana
ENSLAFG00000018056-10093.263ENSRROG00000031238-10093.263Rhinopithecus_roxellana
ENSLAFG00000018056-10098.737ENSSBOG00000023891U2AF210098.737Saimiri_boliviensis_boliviensis
ENSLAFG00000018056-6371.850ENSSHAG00000001167U2AF28577.358Sarcophilus_harrisii
ENSLAFG00000018056-8494.430ENSSFOG00015019182u2af2b8994.430Scleropages_formosus
ENSLAFG00000018056-9976.483ENSSFOG00015003884-9779.024Scleropages_formosus
ENSLAFG00000018056-9975.957ENSSMAG00000013779-10073.191Scophthalmus_maximus
ENSLAFG00000018056-10088.136ENSSMAG00000012582u2af2a10088.347Scophthalmus_maximus
ENSLAFG00000018056-9989.597ENSSDUG00000009457u2af2a10089.597Seriola_dumerili
ENSLAFG00000018056-9674.839ENSSDUG00000021434-8379.075Seriola_dumerili
ENSLAFG00000018056-10089.619ENSSLDG00000022742u2af2a10089.619Seriola_lalandi_dorsalis
ENSLAFG00000018056-9674.839ENSSLDG00000016151-8879.075Seriola_lalandi_dorsalis
ENSLAFG00000018056-10094.781ENSSPUG00000010229U2AF210094.781Sphenodon_punctatus
ENSLAFG00000018056-9976.170ENSSPAG00000005241-10073.191Stegastes_partitus
ENSLAFG00000018056-10089.831ENSSPAG00000022519u2af2a10089.831Stegastes_partitus
ENSLAFG00000018056-10098.737ENSSSCG00000034815U2AF210098.737Sus_scrofa
ENSLAFG00000018056-8392.802ENSTRUG00000005514u2af2a8892.386Takifugu_rubripes
ENSLAFG00000018056-9973.673ENSTNIG00000011257-10073.248Tetraodon_nigroviridis
ENSLAFG00000018056-10089.407ENSTNIG00000008106U2AF210089.831Tetraodon_nigroviridis
ENSLAFG00000018056-7894.324ENSTBEG00000009104U2AF210094.324Tupaia_belangeri
ENSLAFG00000018056-10099.368ENSTTRG00000000987U2AF210099.368Tursiops_truncatus
ENSLAFG00000018056-9696.718ENSUAMG00000019883U2AF210096.718Ursus_americanus
ENSLAFG00000018056-9696.718ENSUMAG00000024586U2AF2100100.000Ursus_maritimus
ENSLAFG00000018056-9798.693ENSVVUG00000006956U2AF26798.693Vulpes_vulpes
ENSLAFG00000018056-10092.562ENSXETG00000019128u2af210092.562Xenopus_tropicalis
ENSLAFG00000018056-8395.373ENSXCOG00000019406u2af2a9094.924Xiphophorus_couchianus
ENSLAFG00000018056-10089.619ENSXMAG00000011979u2af2a10089.619Xiphophorus_maculatus
ENSLAFG00000018056-9976.170ENSXMAG00000000768-9672.979Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us