EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018136 (Gene tree)
Gene ID: -
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 40324 bases
Position: chrscaffold_127:201978-242301
Accession: 1916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027625	ResIII	PF04851.15	2.5e-10	1	1
ENSLAFP00000015204	ResIII	PF04851.15	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018141	CHD1L-202	2577	-	ENSLAFP00000015204	859 (aa)	-	G3TK82
ENSLAFT00000028266	CHD1L-201	2598	-	ENSLAFP00000027625	866 (aa)	-	G3UIG7

Gene Model

Click here to download ENSLAFG00000018136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018136	CHD1L	53	31.558	ENSLAFG00000007583	RAD54L	68	31.558
ENSLAFG00000018136	CHD1L	65	42.509	ENSLAFG00000007795	SMARCA5	53	42.509
ENSLAFG00000018136	CHD1L	59	46.529	ENSLAFG00000016885	-	61	46.555
ENSLAFG00000018136	CHD1L	53	30.097	ENSLAFG00000015315	-	62	30.233
ENSLAFG00000018136	CHD1L	65	43.696	ENSLAFG00000000896	SMARCA1	57	43.696
ENSLAFG00000018136	CHD1L	56	40.142	ENSLAFG00000007049	HELLS	67	40.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018136	CHD1L	99	90.952	ENSG00000131778	CHD1L	99	90.000	Homo_sapiens
ENSLAFG00000018136	CHD1L	99	64.118	ENSAPOG00000001539	chd1l	96	64.906	Acanthochromis_polyacanthus
ENSLAFG00000018136	CHD1L	99	89.498	ENSAMEG00000017063	CHD1L	95	89.498	Ailuropoda_melanoleuca
ENSLAFG00000018136	CHD1L	98	64.817	ENSACIG00000001164	chd1l	96	65.677	Amphilophus_citrinellus
ENSLAFG00000018136	CHD1L	98	64.775	ENSAOCG00000014510	chd1l	84	63.921	Amphiprion_ocellaris
ENSLAFG00000018136	CHD1L	98	62.262	ENSAPEG00000017450	chd1l	92	62.782	Amphiprion_percula
ENSLAFG00000018136	CHD1L	99	62.162	ENSAPEG00000017573	chd1l	93	62.441	Amphiprion_percula
ENSLAFG00000018136	CHD1L	100	65.425	ENSATEG00000013058	chd1l	91	65.425	Anabas_testudineus
ENSLAFG00000018136	CHD1L	99	73.616	ENSAPLG00000009976	CHD1L	95	73.519	Anas_platyrhynchos
ENSLAFG00000018136	CHD1L	99	68.930	ENSACAG00000017686	CHD1L	96	68.218	Anolis_carolinensis
ENSLAFG00000018136	CHD1L	99	90.364	ENSANAG00000024347	CHD1L	95	90.221	Aotus_nancymaae
ENSLAFG00000018136	CHD1L	100	64.460	ENSACLG00000019304	chd1l	95	64.733	Astatotilapia_calliptera
ENSLAFG00000018136	CHD1L	99	57.259	ENSAMXG00000012367	chd1l	85	57.259	Astyanax_mexicanus
ENSLAFG00000018136	CHD1L	99	90.035	ENSBTAG00000020831	CHD1L	95	89.872	Bos_taurus
ENSLAFG00000018136	CHD1L	99	90.012	ENSCJAG00000002406	CHD1L	95	89.872	Callithrix_jacchus
ENSLAFG00000018136	CHD1L	99	85.681	ENSCAFG00000010944	CHD1L	94	85.764	Canis_familiaris
ENSLAFG00000018136	CHD1L	99	88.850	ENSCAFG00020020121	CHD1L	95	88.717	Canis_lupus_dingo
ENSLAFG00000018136	CHD1L	100	89.290	ENSCHIG00000013871	CHD1L	96	89.290	Capra_hircus
ENSLAFG00000018136	CHD1L	99	91.038	ENSTSYG00000003005	CHD1L	99	90.771	Carlito_syrichta
ENSLAFG00000018136	CHD1L	99	87.146	ENSCPOG00000009000	CHD1L	95	86.916	Cavia_porcellus
ENSLAFG00000018136	CHD1L	99	87.192	ENSCCAG00000036079	CHD1L	95	87.078	Cebus_capucinus
ENSLAFG00000018136	CHD1L	98	91.489	ENSCATG00000031044	CHD1L	95	91.036	Cercocebus_atys
ENSLAFG00000018136	CHD1L	99	88.221	ENSCLAG00000000880	CHD1L	96	88.009	Chinchilla_lanigera
ENSLAFG00000018136	CHD1L	98	91.608	ENSCSAG00000018386	CHD1L	95	91.036	Chlorocebus_sabaeus
ENSLAFG00000018136	CHD1L	99	76.415	ENSCPBG00000002600	CHD1L	96	75.786	Chrysemys_picta_bellii
ENSLAFG00000018136	CHD1L	99	89.659	ENSCANG00000020239	CHD1L	95	89.523	Colobus_angolensis_palliatus
ENSLAFG00000018136	CHD1L	99	86.033	ENSCGRG00001021624	Chd1l	96	85.236	Cricetulus_griseus_chok1gshd
ENSLAFG00000018136	CHD1L	98	86.052	ENSCGRG00000007554	Chd1l	99	85.614	Cricetulus_griseus_crigri
ENSLAFG00000018136	CHD1L	100	63.218	ENSCVAG00000002595	chd1l	89	63.066	Cyprinodon_variegatus
ENSLAFG00000018136	CHD1L	98	64.929	ENSDARG00000015471	chd1l	83	64.377	Danio_rerio
ENSLAFG00000018136	CHD1L	99	91.259	ENSDNOG00000019504	CHD1L	95	91.259	Dasypus_novemcinctus
ENSLAFG00000018136	CHD1L	100	83.063	ENSDORG00000013555	Chd1l	96	83.063	Dipodomys_ordii
ENSLAFG00000018136	CHD1L	90	83.860	ENSETEG00000008445	CHD1L	85	84.155	Echinops_telfairi
ENSLAFG00000018136	CHD1L	67	76.596	ENSEBUG00000005791	chd1l	74	83.333	Eptatretus_burgeri
ENSLAFG00000018136	CHD1L	99	90.210	ENSEASG00005007364	CHD1L	100	90.097	Equus_asinus_asinus
ENSLAFG00000018136	CHD1L	99	90.210	ENSECAG00000008915	CHD1L	100	90.097	Equus_caballus
ENSLAFG00000018136	CHD1L	98	55.164	ENSELUG00000016844	chd1l	82	55.029	Esox_lucius
ENSLAFG00000018136	CHD1L	99	89.554	ENSFCAG00000007777	CHD1L	95	89.406	Felis_catus
ENSLAFG00000018136	CHD1L	100	71.977	ENSFALG00000006087	CHD1L	94	72.358	Ficedula_albicollis
ENSLAFG00000018136	CHD1L	98	89.243	ENSFDAG00000012431	CHD1L	99	88.837	Fukomys_damarensis
ENSLAFG00000018136	CHD1L	100	63.995	ENSFHEG00000012420	chd1l	85	63.899	Fundulus_heteroclitus
ENSLAFG00000018136	CHD1L	100	71.163	ENSGALG00000015038	CHD1L	95	71.512	Gallus_gallus
ENSLAFG00000018136	CHD1L	99	64.789	ENSGAFG00000018198	chd1l	95	61.831	Gambusia_affinis
ENSLAFG00000018136	CHD1L	60	65.377	ENSGACG00000014042	chd1l	99	65.377	Gasterosteus_aculeatus
ENSLAFG00000018136	CHD1L	98	76.694	ENSGAGG00000014432	CHD1L	95	76.694	Gopherus_agassizii
ENSLAFG00000018136	CHD1L	99	90.834	ENSGGOG00000001067	CHD1L	95	90.687	Gorilla_gorilla
ENSLAFG00000018136	CHD1L	100	64.111	ENSHBUG00000007464	chd1l	96	64.186	Haplochromis_burtoni
ENSLAFG00000018136	CHD1L	99	87.367	ENSHGLG00000008933	CHD1L	96	86.358	Heterocephalus_glaber_female
ENSLAFG00000018136	CHD1L	98	85.748	ENSHGLG00100007155	CHD1L	99	85.246	Heterocephalus_glaber_male
ENSLAFG00000018136	CHD1L	98	62.810	ENSHCOG00000012787	chd1l	92	62.989	Hippocampus_comes
ENSLAFG00000018136	CHD1L	99	60.685	ENSIPUG00000022617	chd1l	83	59.742	Ictalurus_punctatus
ENSLAFG00000018136	CHD1L	100	79.977	ENSSTOG00000007032	CHD1L	95	79.977	Ictidomys_tridecemlineatus
ENSLAFG00000018136	CHD1L	99	64.103	ENSKMAG00000014358	chd1l	84	64.569	Kryptolebias_marmoratus
ENSLAFG00000018136	CHD1L	99	63.520	ENSLBEG00000023845	chd1l	98	62.012	Labrus_bergylta
ENSLAFG00000018136	CHD1L	99	65.116	ENSLACG00000006262	CHD1L	85	64.868	Latimeria_chalumnae
ENSLAFG00000018136	CHD1L	98	68.876	ENSLOCG00000010574	chd1l	85	68.060	Lepisosteus_oculatus
ENSLAFG00000018136	CHD1L	98	90.178	ENSMFAG00000043562	CHD1L	99	90.712	Macaca_fascicularis
ENSLAFG00000018136	CHD1L	98	91.253	ENSMMUG00000009024	CHD1L	95	90.803	Macaca_mulatta
ENSLAFG00000018136	CHD1L	98	91.371	ENSMNEG00000039905	CHD1L	95	90.920	Macaca_nemestrina
ENSLAFG00000018136	CHD1L	98	91.726	ENSMLEG00000030900	CHD1L	95	91.269	Mandrillus_leucophaeus
ENSLAFG00000018136	CHD1L	98	63.948	ENSMAMG00000012822	chd1l	96	62.159	Mastacembelus_armatus
ENSLAFG00000018136	CHD1L	100	64.494	ENSMZEG00005020830	chd1l	86	64.726	Maylandia_zebra
ENSLAFG00000018136	CHD1L	100	71.080	ENSMGAG00000014304	CHD1L	99	71.312	Meleagris_gallopavo
ENSLAFG00000018136	CHD1L	99	90.695	ENSMICG00000002497	CHD1L	95	90.221	Microcebus_murinus
ENSLAFG00000018136	CHD1L	100	86.628	ENSMOCG00000006305	Chd1l	96	86.374	Microtus_ochrogaster
ENSLAFG00000018136	CHD1L	99	60.814	ENSMMOG00000005964	chd1l	88	60.839	Mola_mola
ENSLAFG00000018136	CHD1L	100	80.256	ENSMODG00000018717	CHD1L	95	80.397	Monodelphis_domestica
ENSLAFG00000018136	CHD1L	99	63.256	ENSMALG00000014675	chd1l	84	63.995	Monopterus_albus
ENSLAFG00000018136	CHD1L	100	85.516	MGP_CAROLIEiJ_G0025401	Chd1l	96	85.155	Mus_caroli
ENSLAFG00000018136	CHD1L	99	86.353	ENSMUSG00000028089	Chd1l	96	85.599	Mus_musculus
ENSLAFG00000018136	CHD1L	100	85.947	MGP_PahariEiJ_G0026845	Chd1l	96	85.698	Mus_pahari
ENSLAFG00000018136	CHD1L	99	86.235	MGP_SPRETEiJ_G0026347	Chd1l	96	85.484	Mus_spretus
ENSLAFG00000018136	CHD1L	99	88.551	ENSMPUG00000000615	CHD1L	94	88.967	Mustela_putorius_furo
ENSLAFG00000018136	CHD1L	99	87.515	ENSMLUG00000007573	CHD1L	94	87.456	Myotis_lucifugus
ENSLAFG00000018136	CHD1L	100	83.721	ENSNGAG00000000908	Chd1l	98	83.256	Nannospalax_galili
ENSLAFG00000018136	CHD1L	98	62.898	ENSNBRG00000006021	chd1l	91	63.389	Neolamprologus_brichardi
ENSLAFG00000018136	CHD1L	99	90.364	ENSNLEG00000000179	CHD1L	95	90.221	Nomascus_leucogenys
ENSLAFG00000018136	CHD1L	99	76.051	ENSOPRG00000006973	CHD1L	99	76.140	Ochotona_princeps
ENSLAFG00000018136	CHD1L	99	83.489	ENSODEG00000002494	CHD1L	96	83.411	Octodon_degus
ENSLAFG00000018136	CHD1L	100	64.393	ENSONIG00000003183	chd1l	87	64.843	Oreochromis_niloticus
ENSLAFG00000018136	CHD1L	90	71.923	ENSOANG00000003068	CHD1L	93	72.436	Ornithorhynchus_anatinus
ENSLAFG00000018136	CHD1L	99	83.643	ENSOCUG00000009336	CHD1L	95	82.877	Oryctolagus_cuniculus
ENSLAFG00000018136	CHD1L	100	61.547	ENSORLG00000003673	chd1l	93	62.674	Oryzias_latipes
ENSLAFG00000018136	CHD1L	98	62.692	ENSORLG00020005123	chd1l	89	65.094	Oryzias_latipes_hni
ENSLAFG00000018136	CHD1L	99	61.932	ENSORLG00015001680	chd1l	96	62.807	Oryzias_latipes_hsok
ENSLAFG00000018136	CHD1L	78	63.115	ENSOMEG00000006109	chd1l	79	63.115	Oryzias_melastigma
ENSLAFG00000018136	CHD1L	100	88.023	ENSOGAG00000008775	CHD1L	95	88.023	Otolemur_garnettii
ENSLAFG00000018136	CHD1L	100	89.406	ENSOARG00000020547	CHD1L	99	89.406	Ovis_aries
ENSLAFG00000018136	CHD1L	98	89.750	ENSPPAG00000039193	CHD1L	99	90.545	Pan_paniscus
ENSLAFG00000018136	CHD1L	99	89.437	ENSPPRG00000010258	CHD1L	95	89.290	Panthera_pardus
ENSLAFG00000018136	CHD1L	99	90.952	ENSPTRG00000001220	CHD1L	95	90.793	Pan_troglodytes
ENSLAFG00000018136	CHD1L	98	91.489	ENSPANG00000009170	CHD1L	95	91.036	Papio_anubis
ENSLAFG00000018136	CHD1L	99	63.310	ENSPKIG00000022166	chd1l	93	62.968	Paramormyrops_kingsleyae
ENSLAFG00000018136	CHD1L	99	76.061	ENSPSIG00000012595	CHD1L	95	75.233	Pelodiscus_sinensis
ENSLAFG00000018136	CHD1L	99	83.879	ENSPEMG00000013528	Chd1l	95	84.589	Peromyscus_maniculatus_bairdii
ENSLAFG00000018136	CHD1L	97	80.820	ENSPCIG00000030409	CHD1L	99	80.970	Phascolarctos_cinereus
ENSLAFG00000018136	CHD1L	100	64.120	ENSPFOG00000015948	chd1l	84	64.658	Poecilia_formosa
ENSLAFG00000018136	CHD1L	100	64.269	ENSPLAG00000015145	chd1l	96	63.689	Poecilia_latipinna
ENSLAFG00000018136	CHD1L	100	63.857	ENSPMEG00000008720	chd1l	89	64.460	Poecilia_mexicana
ENSLAFG00000018136	CHD1L	98	63.251	ENSPREG00000017885	chd1l	95	62.898	Poecilia_reticulata
ENSLAFG00000018136	CHD1L	99	91.069	ENSPPYG00000000946	CHD1L	95	90.920	Pongo_abelii
ENSLAFG00000018136	CHD1L	100	79.860	ENSPCAG00000005959	CHD1L	95	79.860	Procavia_capensis
ENSLAFG00000018136	CHD1L	99	80.047	ENSPVAG00000006084	CHD1L	99	80.047	Pteropus_vampyrus
ENSLAFG00000018136	CHD1L	99	64.269	ENSPNYG00000013001	chd1l	95	64.535	Pundamilia_nyererei
ENSLAFG00000018136	CHD1L	99	63.325	ENSPNAG00000011881	chd1l	83	63.488	Pygocentrus_nattereri
ENSLAFG00000018136	CHD1L	100	86.079	ENSRNOG00000017669	Chd1l	95	87.063	Rattus_norvegicus
ENSLAFG00000018136	CHD1L	99	89.777	ENSRBIG00000041272	CHD1L	95	89.639	Rhinopithecus_bieti
ENSLAFG00000018136	CHD1L	98	89.762	ENSRROG00000041354	CHD1L	94	89.667	Rhinopithecus_roxellana
ENSLAFG00000018136	CHD1L	99	76.533	ENSSHAG00000017395	CHD1L	95	76.135	Sarcophilus_harrisii
ENSLAFG00000018136	CHD1L	99	66.157	ENSSFOG00015003649	chd1l	94	64.531	Scleropages_formosus
ENSLAFG00000018136	CHD1L	99	60.341	ENSSMAG00000019377	chd1l	92	60.449	Scophthalmus_maximus
ENSLAFG00000018136	CHD1L	99	63.732	ENSSDUG00000019831	chd1l	95	63.817	Seriola_dumerili
ENSLAFG00000018136	CHD1L	99	63.700	ENSSLDG00000012714	chd1l	95	63.837	Seriola_lalandi_dorsalis
ENSLAFG00000018136	CHD1L	100	72.706	ENSSPUG00000016865	CHD1L	96	72.938	Sphenodon_punctatus
ENSLAFG00000018136	CHD1L	98	65.212	ENSSPAG00000017653	chd1l	90	64.692	Stegastes_partitus
ENSLAFG00000018136	CHD1L	99	86.284	ENSSSCG00000006701	CHD1L	96	86.147	Sus_scrofa
ENSLAFG00000018136	CHD1L	99	73.263	ENSTGUG00000013392	-	98	73.287	Taeniopygia_guttata
ENSLAFG00000018136	CHD1L	98	59.338	ENSTNIG00000004902	chd1l	98	59.080	Tetraodon_nigroviridis
ENSLAFG00000018136	CHD1L	99	85.648	ENSTTRG00000011711	CHD1L	99	85.714	Tursiops_truncatus
ENSLAFG00000018136	CHD1L	99	88.681	ENSUAMG00000021991	CHD1L	96	88.631	Ursus_americanus
ENSLAFG00000018136	CHD1L	99	88.605	ENSUMAG00000009733	CHD1L	96	88.033	Ursus_maritimus
ENSLAFG00000018136	CHD1L	99	88.565	ENSVVUG00000007316	CHD1L	89	90.625	Vulpes_vulpes
ENSLAFG00000018136	CHD1L	100	61.761	ENSXCOG00000008336	chd1l	84	61.761	Xiphophorus_couchianus
ENSLAFG00000018136	CHD1L	100	64.195	ENSXMAG00000015898	chd1l	96	60.047	Xiphophorus_maculatus