EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018225 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 16209 bases
Position: chrscaffold_6:46603890-46620098
Accession: 100659522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015268	PRP4	PF08799.11	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018225	PRPF4-201	1569	-	ENSLAFP00000015268	522 (aa)	XP_010586025	G3TKC7

Gene Model

Click here to download ENSLAFG00000018225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018225	PRPF4	56	32.203	ENSLAFG00000017550	POC1B	62	32.203
ENSLAFG00000018225	PRPF4	56	32.653	ENSLAFG00000004699	TBL3	66	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018225	PRPF4	100	98.659	ENSG00000136875	PRPF4	100	98.659	Homo_sapiens
ENSLAFG00000018225	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSLAFG00000018225	PRPF4	100	99.042	ENSAMEG00000013048	PRPF4	98	99.042	Ailuropoda_melanoleuca
ENSLAFG00000018225	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSLAFG00000018225	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSLAFG00000018225	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSLAFG00000018225	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSLAFG00000018225	PRPF4	99	89.729	ENSAPLG00000006534	PRPF4	96	89.729	Anas_platyrhynchos
ENSLAFG00000018225	PRPF4	100	89.504	ENSACAG00000015110	PRPF4	100	89.504	Anolis_carolinensis
ENSLAFG00000018225	PRPF4	100	99.042	ENSANAG00000022464	PRPF4	96	99.042	Aotus_nancymaae
ENSLAFG00000018225	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSLAFG00000018225	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSLAFG00000018225	PRPF4	100	98.467	ENSBTAG00000004571	PRPF4	100	98.467	Bos_taurus
ENSLAFG00000018225	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSLAFG00000018225	PRPF4	100	98.467	ENSCJAG00000017856	PRPF4	100	98.467	Callithrix_jacchus
ENSLAFG00000018225	PRPF4	100	99.042	ENSCAFG00000003224	PRPF4	97	99.042	Canis_familiaris
ENSLAFG00000018225	PRPF4	100	99.042	ENSCAFG00020022637	PRPF4	100	99.042	Canis_lupus_dingo
ENSLAFG00000018225	PRPF4	100	98.276	ENSCHIG00000024648	-	100	98.276	Capra_hircus
ENSLAFG00000018225	PRPF4	100	98.851	ENSTSYG00000010366	PRPF4	100	98.851	Carlito_syrichta
ENSLAFG00000018225	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSLAFG00000018225	PRPF4	100	91.762	ENSCPOG00000014729	-	100	91.762	Cavia_porcellus
ENSLAFG00000018225	PRPF4	100	98.276	ENSCPOG00000010747	-	100	98.276	Cavia_porcellus
ENSLAFG00000018225	PRPF4	100	98.851	ENSCCAG00000028990	PRPF4	100	98.851	Cebus_capucinus
ENSLAFG00000018225	PRPF4	100	98.851	ENSCATG00000021552	PRPF4	100	98.851	Cercocebus_atys
ENSLAFG00000018225	PRPF4	100	98.467	ENSCLAG00000013448	PRPF4	100	98.467	Chinchilla_lanigera
ENSLAFG00000018225	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSLAFG00000018225	PRPF4	99	90.891	ENSCPBG00000019136	PRPF4	74	90.891	Chrysemys_picta_bellii
ENSLAFG00000018225	PRPF4	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSLAFG00000018225	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSLAFG00000018225	PRPF4	100	99.042	ENSCANG00000003246	PRPF4	100	99.042	Colobus_angolensis_palliatus
ENSLAFG00000018225	PRPF4	100	98.659	ENSCGRG00001016992	Prpf4	100	98.659	Cricetulus_griseus_chok1gshd
ENSLAFG00000018225	PRPF4	100	98.659	ENSCGRG00000017560	Prpf4	100	98.659	Cricetulus_griseus_crigri
ENSLAFG00000018225	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSLAFG00000018225	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSLAFG00000018225	PRPF4	100	98.659	ENSDNOG00000013203	PRPF4	100	98.659	Dasypus_novemcinctus
ENSLAFG00000018225	PRPF4	100	98.659	ENSDORG00000026275	Prpf4	100	98.659	Dipodomys_ordii
ENSLAFG00000018225	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSLAFG00000018225	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSLAFG00000018225	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSLAFG00000018225	PRPF4	100	99.042	ENSEASG00005022678	PRPF4	100	99.042	Equus_asinus_asinus
ENSLAFG00000018225	PRPF4	100	99.042	ENSECAG00000007072	PRPF4	100	99.042	Equus_caballus
ENSLAFG00000018225	PRPF4	100	77.293	ENSEEUG00000007480	PRPF4	100	77.293	Erinaceus_europaeus
ENSLAFG00000018225	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSLAFG00000018225	PRPF4	100	98.467	ENSFCAG00000005514	PRPF4	100	98.467	Felis_catus
ENSLAFG00000018225	PRPF4	98	88.315	ENSFALG00000005423	PRPF4	88	87.061	Ficedula_albicollis
ENSLAFG00000018225	PRPF4	100	98.276	ENSFDAG00000005839	PRPF4	100	98.276	Fukomys_damarensis
ENSLAFG00000018225	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSLAFG00000018225	PRPF4	98	90.373	ENSGALG00000008857	PRPF4	96	89.060	Gallus_gallus
ENSLAFG00000018225	PRPF4	65	70.882	ENSGAFG00000012164	prpf4	70	70.882	Gambusia_affinis
ENSLAFG00000018225	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSLAFG00000018225	PRPF4	99	90.698	ENSGAGG00000025029	PRPF4	96	90.698	Gopherus_agassizii
ENSLAFG00000018225	PRPF4	100	98.659	ENSGGOG00000006943	PRPF4	100	98.659	Gorilla_gorilla
ENSLAFG00000018225	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSLAFG00000018225	PRPF4	100	98.276	ENSHGLG00000015191	PRPF4	100	98.276	Heterocephalus_glaber_female
ENSLAFG00000018225	PRPF4	100	79.693	ENSHGLG00000003838	-	100	79.693	Heterocephalus_glaber_female
ENSLAFG00000018225	PRPF4	100	81.107	ENSHGLG00000016628	-	100	81.870	Heterocephalus_glaber_female
ENSLAFG00000018225	PRPF4	100	79.693	ENSHGLG00100005571	-	100	79.693	Heterocephalus_glaber_male
ENSLAFG00000018225	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSLAFG00000018225	PRPF4	100	98.467	ENSSTOG00000027833	PRPF4	100	98.467	Ictidomys_tridecemlineatus
ENSLAFG00000018225	PRPF4	100	98.659	ENSJJAG00000008838	Prpf4	100	98.659	Jaculus_jaculus
ENSLAFG00000018225	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSLAFG00000018225	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSLAFG00000018225	PRPF4	98	80.934	ENSLACG00000016317	PRPF4	98	80.934	Latimeria_chalumnae
ENSLAFG00000018225	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSLAFG00000018225	PRPF4	100	98.659	ENSMFAG00000039397	PRPF4	100	98.659	Macaca_fascicularis
ENSLAFG00000018225	PRPF4	100	98.851	ENSMMUG00000005844	PRPF4	100	98.851	Macaca_mulatta
ENSLAFG00000018225	PRPF4	100	87.548	ENSMNEG00000033737	PRPF4	100	88.314	Macaca_nemestrina
ENSLAFG00000018225	PRPF4	100	98.851	ENSMLEG00000040284	PRPF4	100	98.851	Mandrillus_leucophaeus
ENSLAFG00000018225	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSLAFG00000018225	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSLAFG00000018225	PRPF4	98	89.784	ENSMGAG00000001796	PRPF4	95	89.784	Meleagris_gallopavo
ENSLAFG00000018225	PRPF4	100	98.084	ENSMAUG00000018022	Prpf4	100	98.084	Mesocricetus_auratus
ENSLAFG00000018225	PRPF4	100	97.893	ENSMICG00000015022	PRPF4	100	97.510	Microcebus_murinus
ENSLAFG00000018225	PRPF4	100	98.084	ENSMOCG00000018273	Prpf4	100	98.084	Microtus_ochrogaster
ENSLAFG00000018225	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSLAFG00000018225	PRPF4	100	94.455	ENSMODG00000004444	-	100	94.455	Monodelphis_domestica
ENSLAFG00000018225	PRPF4	100	94.455	ENSMODG00000025096	-	97	94.455	Monodelphis_domestica
ENSLAFG00000018225	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSLAFG00000018225	PRPF4	100	98.659	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.659	Mus_caroli
ENSLAFG00000018225	PRPF4	100	98.659	ENSMUSG00000066148	Prpf4	100	98.659	Mus_musculus
ENSLAFG00000018225	PRPF4	100	98.467	MGP_PahariEiJ_G0028413	Prpf4	100	98.467	Mus_pahari
ENSLAFG00000018225	PRPF4	100	98.659	MGP_SPRETEiJ_G0027042	Prpf4	100	98.659	Mus_spretus
ENSLAFG00000018225	PRPF4	100	99.042	ENSMPUG00000007883	PRPF4	100	99.042	Mustela_putorius_furo
ENSLAFG00000018225	PRPF4	100	96.552	ENSMLUG00000008626	-	97	96.552	Myotis_lucifugus
ENSLAFG00000018225	PRPF4	100	98.467	ENSMLUG00000015309	-	97	98.467	Myotis_lucifugus
ENSLAFG00000018225	PRPF4	100	93.295	ENSNGAG00000000468	Prpf4	100	93.295	Nannospalax_galili
ENSLAFG00000018225	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSLAFG00000018225	PRPF4	100	99.042	ENSNLEG00000016647	PRPF4	100	99.042	Nomascus_leucogenys
ENSLAFG00000018225	PRPF4	98	95.525	ENSMEUG00000013256	PRPF4	100	95.525	Notamacropus_eugenii
ENSLAFG00000018225	PRPF4	100	97.701	ENSOPRG00000005302	PRPF4	100	97.701	Ochotona_princeps
ENSLAFG00000018225	PRPF4	100	98.659	ENSODEG00000018147	PRPF4	100	98.659	Octodon_degus
ENSLAFG00000018225	PRPF4	96	76.984	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSLAFG00000018225	PRPF4	100	98.851	ENSOCUG00000005046	PRPF4	100	98.851	Oryctolagus_cuniculus
ENSLAFG00000018225	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSLAFG00000018225	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSLAFG00000018225	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSLAFG00000018225	PRPF4	100	93.870	ENSOGAG00000007802	PRPF4	98	93.870	Otolemur_garnettii
ENSLAFG00000018225	PRPF4	100	98.851	ENSOARG00000006319	PRPF4	97	98.851	Ovis_aries
ENSLAFG00000018225	PRPF4	100	98.659	ENSPPAG00000041797	PRPF4	100	98.659	Pan_paniscus
ENSLAFG00000018225	PRPF4	100	99.042	ENSPPRG00000014360	PRPF4	100	99.042	Panthera_pardus
ENSLAFG00000018225	PRPF4	100	99.042	ENSPTIG00000009574	PRPF4	100	99.042	Panthera_tigris_altaica
ENSLAFG00000018225	PRPF4	100	98.659	ENSPTRG00000021274	PRPF4	100	98.084	Pan_troglodytes
ENSLAFG00000018225	PRPF4	100	98.659	ENSPANG00000025776	PRPF4	96	98.659	Papio_anubis
ENSLAFG00000018225	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSLAFG00000018225	PRPF4	100	89.847	ENSPSIG00000010713	PRPF4	90	91.228	Pelodiscus_sinensis
ENSLAFG00000018225	PRPF4	99	58.716	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSLAFG00000018225	PRPF4	100	98.659	ENSPEMG00000024115	Prpf4	100	98.659	Peromyscus_maniculatus_bairdii
ENSLAFG00000018225	PRPF4	98	95.525	ENSPCIG00000003821	PRPF4	99	95.525	Phascolarctos_cinereus
ENSLAFG00000018225	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSLAFG00000018225	PRPF4	84	70.571	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSLAFG00000018225	PRPF4	91	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSLAFG00000018225	PRPF4	98	99.415	ENSPCAG00000002561	PRPF4	99	99.415	Procavia_capensis
ENSLAFG00000018225	PRPF4	100	98.467	ENSPCOG00000011975	PRPF4	100	98.467	Propithecus_coquereli
ENSLAFG00000018225	PRPF4	100	94.828	ENSPVAG00000004708	PRPF4	100	94.828	Pteropus_vampyrus
ENSLAFG00000018225	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSLAFG00000018225	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSLAFG00000018225	PRPF4	100	98.467	ENSRNOG00000014777	Prpf4	100	98.467	Rattus_norvegicus
ENSLAFG00000018225	PRPF4	100	99.042	ENSRBIG00000040221	PRPF4	100	99.042	Rhinopithecus_bieti
ENSLAFG00000018225	PRPF4	100	99.042	ENSRROG00000040240	PRPF4	100	99.042	Rhinopithecus_roxellana
ENSLAFG00000018225	PRPF4	100	95.029	ENSSHAG00000017658	PRPF4	100	95.029	Sarcophilus_harrisii
ENSLAFG00000018225	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSLAFG00000018225	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSLAFG00000018225	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSLAFG00000018225	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSLAFG00000018225	PRPF4	100	89.847	ENSSPUG00000015582	PRPF4	100	89.847	Sphenodon_punctatus
ENSLAFG00000018225	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSLAFG00000018225	PRPF4	100	99.042	ENSSSCG00000024648	PRPF4	100	99.042	Sus_scrofa
ENSLAFG00000018225	PRPF4	94	90.798	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSLAFG00000018225	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSLAFG00000018225	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSLAFG00000018225	PRPF4	100	89.464	ENSTBEG00000000821	PRPF4	100	89.464	Tupaia_belangeri
ENSLAFG00000018225	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSLAFG00000018225	PRPF4	64	95.522	ENSUAMG00000018288	PRPF4	90	95.522	Ursus_americanus
ENSLAFG00000018225	PRPF4	100	98.467	ENSUMAG00000019375	PRPF4	100	98.467	Ursus_maritimus
ENSLAFG00000018225	PRPF4	100	97.893	ENSVPAG00000005281	PRPF4	100	97.893	Vicugna_pacos
ENSLAFG00000018225	PRPF4	100	97.909	ENSVVUG00000002476	PRPF4	100	98.422	Vulpes_vulpes
ENSLAFG00000018225	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.360	Xiphophorus_couchianus
ENSLAFG00000018225	PRPF4	87	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus