EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018248 (Gene tree)
Gene ID: -
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 5676 bases
Position: chrscaffold_31:21406044-21411719
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015284	MMR_HSR1	PF01926.23	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018247	ARL5C-201	543	-	ENSLAFP00000015284	180 (aa)	-	G3TKE0

Gene Model

Click here to download ENSLAFG00000018248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018248	ARL5C	96	43.931	ENSLAFG00000006203	ARF4	96	43.931
ENSLAFG00000018248	ARL5C	96	46.821	ENSLAFG00000006987	ARF1	96	46.821
ENSLAFG00000018248	ARL5C	97	73.714	ENSLAFG00000032104	ARL5A	98	73.714
ENSLAFG00000018248	ARL5C	75	33.824	ENSLAFG00000017880	ARL10	55	33.577
ENSLAFG00000018248	ARL5C	88	45.912	ENSLAFG00000026143	ARL1	91	44.253
ENSLAFG00000018248	ARL5C	90	39.645	ENSLAFG00000010461	ARL14	88	39.645
ENSLAFG00000018248	ARL5C	91	41.463	ENSLAFG00000020731	-	89	41.463
ENSLAFG00000018248	ARL5C	86	33.125	ENSLAFG00000002606	ARL4D	80	33.125
ENSLAFG00000018248	ARL5C	97	77.841	ENSLAFG00000001487	ARL5B	97	77.841
ENSLAFG00000018248	ARL5C	94	36.872	ENSLAFG00000010685	ARFRP1	89	36.872
ENSLAFG00000018248	ARL5C	97	44.318	ENSLAFG00000004207	-	97	44.318
ENSLAFG00000018248	ARL5C	87	40.741	ENSLAFG00000022094	ARL4A	81	40.741
ENSLAFG00000018248	ARL5C	96	43.353	ENSLAFG00000011469	ARF5	96	43.353
ENSLAFG00000018248	ARL5C	86	42.331	ENSLAFG00000028097	ARL4C	84	42.331
ENSLAFG00000018248	ARL5C	96	45.665	ENSLAFG00000026599	-	96	45.665
ENSLAFG00000018248	ARL5C	96	38.547	ENSLAFG00000011730	ARL6	93	38.547
ENSLAFG00000018248	ARL5C	90	40.120	ENSLAFG00000001838	ARL11	95	40.120
ENSLAFG00000018248	ARL5C	92	42.424	ENSLAFG00000005070	ARL3	91	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018248	ARL5C	100	87.222	ENSAMEG00000004195	ARL5C	100	87.222	Ailuropoda_melanoleuca
ENSLAFG00000018248	ARL5C	99	82.584	ENSACAG00000003879	-	99	82.584	Anolis_carolinensis
ENSLAFG00000018248	ARL5C	99	92.179	ENSCAFG00000016525	ARL5C	100	92.179	Canis_familiaris
ENSLAFG00000018248	ARL5C	99	89.944	ENSCHIG00000008208	ARL5C	100	89.944	Capra_hircus
ENSLAFG00000018248	ARL5C	59	92.453	ENSCHOG00000013232	-	100	92.453	Choloepus_hoffmanni
ENSLAFG00000018248	ARL5C	98	81.921	ENSCGRG00001000695	Arl5c	99	81.921	Cricetulus_griseus_chok1gshd
ENSLAFG00000018248	ARL5C	98	82.486	ENSCGRG00000007376	Arl5c	99	82.486	Cricetulus_griseus_crigri
ENSLAFG00000018248	ARL5C	99	93.855	ENSDNOG00000019741	ARL5C	100	93.855	Dasypus_novemcinctus
ENSLAFG00000018248	ARL5C	99	89.888	ENSDORG00000016304	Arl5c	99	89.888	Dipodomys_ordii
ENSLAFG00000018248	ARL5C	91	94.512	ENSEASG00005001922	ARL5C	76	94.512	Equus_asinus_asinus
ENSLAFG00000018248	ARL5C	99	94.413	ENSECAG00000009024	ARL5C	100	94.413	Equus_caballus
ENSLAFG00000018248	ARL5C	99	92.179	ENSFCAG00000009962	ARL5C	100	92.179	Felis_catus
ENSLAFG00000018248	ARL5C	99	93.855	ENSSTOG00000011104	ARL5C	100	93.855	Ictidomys_tridecemlineatus
ENSLAFG00000018248	ARL5C	99	80.447	ENSLACG00000015332	ARL5C	100	80.447	Latimeria_chalumnae
ENSLAFG00000018248	ARL5C	98	77.966	ENSMAUG00000012845	Arl5c	87	77.966	Mesocricetus_auratus
ENSLAFG00000018248	ARL5C	99	93.855	ENSMICG00000002661	ARL5C	100	93.855	Microcebus_murinus
ENSLAFG00000018248	ARL5C	99	80.447	ENSMOCG00000000234	Arl5c	100	80.447	Microtus_ochrogaster
ENSLAFG00000018248	ARL5C	99	89.944	MGP_CAROLIEiJ_G0017071	Arl5c	100	89.944	Mus_caroli
ENSLAFG00000018248	ARL5C	99	90.503	ENSMUSG00000038352	Arl5c	100	90.503	Mus_musculus
ENSLAFG00000018248	ARL5C	99	89.944	MGP_PahariEiJ_G0018200	Arl5c	100	89.944	Mus_pahari
ENSLAFG00000018248	ARL5C	99	90.503	MGP_SPRETEiJ_G0017917	Arl5c	100	90.503	Mus_spretus
ENSLAFG00000018248	ARL5C	100	92.222	ENSMLUG00000030149	ARL5C	100	92.222	Myotis_lucifugus
ENSLAFG00000018248	ARL5C	99	91.620	ENSOGAG00000005894	ARL5C	100	91.620	Otolemur_garnettii
ENSLAFG00000018248	ARL5C	100	90.556	ENSOARG00000010377	ARL5C	100	90.556	Ovis_aries
ENSLAFG00000018248	ARL5C	99	92.179	ENSPPRG00000000975	ARL5C	100	92.179	Panthera_pardus
ENSLAFG00000018248	ARL5C	99	92.179	ENSPTIG00000017487	ARL5C	100	92.179	Panthera_tigris_altaica
ENSLAFG00000018248	ARL5C	98	89.266	ENSPEMG00000008932	Arl5c	99	89.266	Peromyscus_maniculatus_bairdii
ENSLAFG00000018248	ARL5C	99	93.855	ENSPCOG00000028489	ARL5C	100	93.855	Propithecus_coquereli
ENSLAFG00000018248	ARL5C	94	92.308	ENSPVAG00000008495	ARL5C	99	92.308	Pteropus_vampyrus
ENSLAFG00000018248	ARL5C	99	87.151	ENSRNOG00000036880	Arl5c	100	87.151	Rattus_norvegicus
ENSLAFG00000018248	ARL5C	96	78.488	ENSSBOG00000021022	ARL5C	98	78.488	Saimiri_boliviensis_boliviensis
ENSLAFG00000018248	ARL5C	95	84.211	ENSSPUG00000007555	ARL5C	100	85.890	Sphenodon_punctatus
ENSLAFG00000018248	ARL5C	99	89.944	ENSTBEG00000007274	ARL5C	100	89.944	Tupaia_belangeri
ENSLAFG00000018248	ARL5C	99	89.944	ENSUAMG00000012299	ARL5C	100	89.944	Ursus_americanus
ENSLAFG00000018248	ARL5C	99	90.503	ENSUMAG00000017197	ARL5C	100	90.503	Ursus_maritimus
ENSLAFG00000018248	ARL5C	99	79.330	ENSXETG00000023713	arl5c	92	79.330	Xenopus_tropicalis