EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 31252 bases
Position: chrscaffold_53:14529015-14560266
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015298	zf-CCCH	PF00642.24	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018263	-	2205	-	ENSLAFP00000015298	734 (aa)	-	G3TKF3

Gene Model

Click here to download ENSLAFG00000018262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018262	-	94	73.684	ENSLAFG00000022662	UNK	82	73.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018262	-	100	77.143	ENSG00000059145	UNKL	88	94.694	Homo_sapiens
ENSLAFG00000018262	-	94	88.217	ENSAPOG00000023784	unkl	84	88.217	Acanthochromis_polyacanthus
ENSLAFG00000018262	-	100	64.411	ENSACIG00000023268	unkl	100	64.865	Amphilophus_citrinellus
ENSLAFG00000018262	-	94	87.898	ENSAOCG00000022845	unkl	84	87.898	Amphiprion_ocellaris
ENSLAFG00000018262	-	94	87.898	ENSAPEG00000011709	unkl	84	87.898	Amphiprion_percula
ENSLAFG00000018262	-	94	88.535	ENSATEG00000004328	unkl	84	88.535	Anabas_testudineus
ENSLAFG00000018262	-	84	87.329	ENSAPLG00000016186	-	79	87.329	Anas_platyrhynchos
ENSLAFG00000018262	-	96	75.882	ENSANAG00000021942	-	100	76.446	Aotus_nancymaae
ENSLAFG00000018262	-	94	87.898	ENSACLG00000006189	unkl	90	87.898	Astatotilapia_calliptera
ENSLAFG00000018262	-	93	88.854	ENSAMXG00000007890	unkl	88	88.854	Astyanax_mexicanus
ENSLAFG00000018262	-	100	77.415	ENSBTAG00000014126	-	100	77.415	Bos_taurus
ENSLAFG00000018262	-	100	72.283	ENSCJAG00000013151	-	100	74.864	Callithrix_jacchus
ENSLAFG00000018262	-	99	73.234	ENSCAFG00000019581	UNKL	99	73.370	Canis_familiaris
ENSLAFG00000018262	-	100	73.197	ENSCAFG00020001284	-	100	73.197	Canis_lupus_dingo
ENSLAFG00000018262	-	96	71.893	ENSTSYG00000033619	-	99	70.123	Carlito_syrichta
ENSLAFG00000018262	-	89	69.970	ENSCAPG00000014785	-	96	69.970	Cavia_aperea
ENSLAFG00000018262	-	100	79.320	ENSCPOG00000011846	-	100	79.320	Cavia_porcellus
ENSLAFG00000018262	-	100	78.562	ENSCCAG00000022808	-	100	78.697	Cebus_capucinus
ENSLAFG00000018262	-	100	77.551	ENSCATG00000033183	-	100	77.959	Cercocebus_atys
ENSLAFG00000018262	-	96	79.379	ENSCLAG00000015420	-	100	79.379	Chinchilla_lanigera
ENSLAFG00000018262	-	100	77.823	ENSCSAG00000011709	-	100	78.231	Chlorocebus_sabaeus
ENSLAFG00000018262	-	99	86.032	ENSCPBG00000002794	-	98	76.685	Chrysemys_picta_bellii
ENSLAFG00000018262	-	87	71.362	ENSCANG00000036315	-	100	71.831	Colobus_angolensis_palliatus
ENSLAFG00000018262	-	100	80.136	ENSCGRG00001014153	Unkl	100	80.408	Cricetulus_griseus_chok1gshd
ENSLAFG00000018262	-	96	79.549	ENSCGRG00000010384	Unkl	100	79.831	Cricetulus_griseus_crigri
ENSLAFG00000018262	-	95	85.846	ENSCSEG00000010415	unkl	85	85.846	Cynoglossus_semilaevis
ENSLAFG00000018262	-	94	87.898	ENSCVAG00000015910	unkl	84	87.898	Cyprinodon_variegatus
ENSLAFG00000018262	-	99	78.133	ENSDARG00000037838	unkl	97	71.596	Danio_rerio
ENSLAFG00000018262	-	58	69.355	ENSDNOG00000045552	-	91	70.046	Dasypus_novemcinctus
ENSLAFG00000018262	-	86	71.339	ENSDORG00000015663	Unkl	91	71.654	Dipodomys_ordii
ENSLAFG00000018262	-	100	75.918	ENSEASG00005000274	-	100	76.463	Equus_asinus_asinus
ENSLAFG00000018262	-	100	74.966	ENSECAG00000010641	UNKL	84	93.291	Equus_caballus
ENSLAFG00000018262	-	94	88.535	ENSELUG00000021446	unkl	83	88.535	Esox_lucius
ENSLAFG00000018262	-	100	71.701	ENSFCAG00000010643	-	100	72.381	Felis_catus
ENSLAFG00000018262	-	100	65.217	ENSFHEG00000002811	unkl	100	65.761	Fundulus_heteroclitus
ENSLAFG00000018262	-	100	81.303	ENSGALG00000043765	-	100	73.236	Gallus_gallus
ENSLAFG00000018262	-	94	87.580	ENSGAFG00000017960	unkl	84	87.580	Gambusia_affinis
ENSLAFG00000018262	-	99	76.000	ENSGAGG00000023664	-	99	66.490	Gopherus_agassizii
ENSLAFG00000018262	-	100	76.152	ENSGGOG00000014915	-	100	77.913	Gorilla_gorilla
ENSLAFG00000018262	-	94	87.898	ENSHBUG00000003486	unkl	84	87.898	Haplochromis_burtoni
ENSLAFG00000018262	-	100	79.428	ENSHGLG00000001586	-	100	79.428	Heterocephalus_glaber_female
ENSLAFG00000018262	-	96	78.955	ENSHGLG00100007463	-	100	78.955	Heterocephalus_glaber_male
ENSLAFG00000018262	-	100	61.382	ENSHCOG00000015734	unkl	100	62.772	Hippocampus_comes
ENSLAFG00000018262	-	96	88.535	ENSIPUG00000019510	unkl	97	70.726	Ictalurus_punctatus
ENSLAFG00000018262	-	96	78.390	ENSSTOG00000003487	-	100	78.390	Ictidomys_tridecemlineatus
ENSLAFG00000018262	-	97	76.371	ENSJJAG00000011047	Unkl	97	76.512	Jaculus_jaculus
ENSLAFG00000018262	-	94	87.898	ENSKMAG00000018810	unkl	84	87.898	Kryptolebias_marmoratus
ENSLAFG00000018262	-	100	61.976	ENSLBEG00000023912	unkl	100	62.753	Labrus_bergylta
ENSLAFG00000018262	-	79	91.705	ENSLACG00000009285	unkl	80	91.705	Latimeria_chalumnae
ENSLAFG00000018262	-	96	88.535	ENSLOCG00000003648	unkl	100	65.576	Lepisosteus_oculatus
ENSLAFG00000018262	-	100	77.415	ENSMFAG00000000632	-	100	77.823	Macaca_fascicularis
ENSLAFG00000018262	-	100	74.661	ENSMMUG00000012440	-	100	74.526	Macaca_mulatta
ENSLAFG00000018262	-	99	71.777	ENSMNEG00000036131	-	99	71.913	Macaca_nemestrina
ENSLAFG00000018262	-	96	69.209	ENSMLEG00000037946	-	100	69.209	Mandrillus_leucophaeus
ENSLAFG00000018262	-	94	88.217	ENSMAMG00000002709	unkl	84	88.217	Mastacembelus_armatus
ENSLAFG00000018262	-	94	87.898	ENSMZEG00005022469	unkl	90	87.898	Maylandia_zebra
ENSLAFG00000018262	-	96	50.441	ENSMGAG00000006920	UNKL	99	58.471	Meleagris_gallopavo
ENSLAFG00000018262	-	100	80.544	ENSMAUG00000016281	Unkl	100	80.816	Mesocricetus_auratus
ENSLAFG00000018262	-	100	73.025	ENSMICG00000007141	-	100	73.025	Microcebus_murinus
ENSLAFG00000018262	-	100	79.184	ENSMOCG00000011424	Unkl	100	79.728	Microtus_ochrogaster
ENSLAFG00000018262	-	100	63.896	ENSMMOG00000014848	unkl	100	64.305	Mola_mola
ENSLAFG00000018262	-	87	79.061	ENSMODG00000016188	-	94	60.142	Monodelphis_domestica
ENSLAFG00000018262	-	94	87.898	ENSMALG00000020837	unkl	84	87.898	Monopterus_albus
ENSLAFG00000018262	-	100	78.639	MGP_CAROLIEiJ_G0021225	Unkl	100	79.184	Mus_caroli
ENSLAFG00000018262	-	100	78.912	ENSMUSG00000015127	Unkl	100	79.456	Mus_musculus
ENSLAFG00000018262	-	100	79.456	MGP_PahariEiJ_G0023543	Unkl	100	79.728	Mus_pahari
ENSLAFG00000018262	-	100	78.912	MGP_SPRETEiJ_G0022136	Unkl	100	79.456	Mus_spretus
ENSLAFG00000018262	-	88	71.385	ENSMPUG00000015653	-	98	71.077	Mustela_putorius_furo
ENSLAFG00000018262	-	86	64.454	ENSMLUG00000011207	-	100	64.454	Myotis_lucifugus
ENSLAFG00000018262	-	100	80.408	ENSNGAG00000002821	Unkl	100	80.680	Nannospalax_galili
ENSLAFG00000018262	-	94	87.898	ENSNBRG00000015104	unkl	84	87.898	Neolamprologus_brichardi
ENSLAFG00000018262	-	98	75.346	ENSNLEG00000008624	-	100	76.870	Nomascus_leucogenys
ENSLAFG00000018262	-	100	79.155	ENSODEG00000017747	-	100	79.155	Octodon_degus
ENSLAFG00000018262	-	96	89.109	ENSONIG00000001411	unkl	100	67.615	Oreochromis_niloticus
ENSLAFG00000018262	-	52	56.338	ENSOANG00000021809	-	99	55.775	Ornithorhynchus_anatinus
ENSLAFG00000018262	-	94	88.854	ENSORLG00000005070	unkl	84	88.854	Oryzias_latipes
ENSLAFG00000018262	-	94	88.854	ENSORLG00020005376	unkl	84	88.854	Oryzias_latipes_hni
ENSLAFG00000018262	-	94	88.854	ENSORLG00015018545	unkl	84	88.854	Oryzias_latipes_hsok
ENSLAFG00000018262	-	94	88.217	ENSOMEG00000023985	unkl	84	88.217	Oryzias_melastigma
ENSLAFG00000018262	-	97	64.177	ENSOARG00000015636	-	97	64.177	Ovis_aries
ENSLAFG00000018262	-	87	70.892	ENSPPAG00000043365	-	100	72.613	Pan_paniscus
ENSLAFG00000018262	-	97	70.968	ENSPPRG00000018472	-	100	71.309	Panthera_pardus
ENSLAFG00000018262	-	78	72.000	ENSPTIG00000000863	-	89	72.997	Panthera_tigris_altaica
ENSLAFG00000018262	-	100	77.279	ENSPTRG00000007591	UNKL	100	78.776	Pan_troglodytes
ENSLAFG00000018262	-	100	77.823	ENSPANG00000015754	-	100	78.231	Papio_anubis
ENSLAFG00000018262	-	100	58.653	ENSPKIG00000006764	-	100	58.785	Paramormyrops_kingsleyae
ENSLAFG00000018262	-	95	88.535	ENSPKIG00000002101	unkl	83	88.535	Paramormyrops_kingsleyae
ENSLAFG00000018262	-	58	54.523	ENSPSIG00000011268	-	95	53.382	Pelodiscus_sinensis
ENSLAFG00000018262	-	100	63.129	ENSPMGG00000020856	unkl	100	63.501	Periophthalmus_magnuspinnatus
ENSLAFG00000018262	-	100	79.728	ENSPEMG00000008937	Unkl	100	80.000	Peromyscus_maniculatus_bairdii
ENSLAFG00000018262	-	100	81.867	ENSPCIG00000015633	-	100	62.981	Phascolarctos_cinereus
ENSLAFG00000018262	-	94	87.580	ENSPFOG00000010836	unkl	84	87.580	Poecilia_formosa
ENSLAFG00000018262	-	100	71.463	ENSPLAG00000002294	unkl	84	87.580	Poecilia_latipinna
ENSLAFG00000018262	-	94	87.580	ENSPMEG00000019000	unkl	84	87.580	Poecilia_mexicana
ENSLAFG00000018262	-	94	87.580	ENSPREG00000007918	unkl	84	87.580	Poecilia_reticulata
ENSLAFG00000018262	-	86	80.235	ENSPPYG00000006950	-	100	77.060	Pongo_abelii
ENSLAFG00000018262	-	54	94.203	ENSPCAG00000017060	-	83	94.203	Procavia_capensis
ENSLAFG00000018262	-	100	79.320	ENSPCOG00000017889	-	100	79.320	Propithecus_coquereli
ENSLAFG00000018262	-	57	80.480	ENSPVAG00000016649	-	88	80.480	Pteropus_vampyrus
ENSLAFG00000018262	-	94	87.898	ENSPNYG00000008111	unkl	90	87.898	Pundamilia_nyererei
ENSLAFG00000018262	-	94	88.854	ENSPNAG00000010422	unkl	83	88.854	Pygocentrus_nattereri
ENSLAFG00000018262	-	100	79.592	ENSRNOG00000054605	Unkl	100	80.136	Rattus_norvegicus
ENSLAFG00000018262	-	100	67.073	ENSRBIG00000040235	-	100	66.622	Rhinopithecus_bieti
ENSLAFG00000018262	-	96	77.010	ENSRROG00000029341	-	100	77.433	Rhinopithecus_roxellana
ENSLAFG00000018262	-	96	78.843	ENSSBOG00000031173	-	100	78.984	Saimiri_boliviensis_boliviensis
ENSLAFG00000018262	-	96	81.556	ENSSHAG00000008411	-	99	62.236	Sarcophilus_harrisii
ENSLAFG00000018262	-	83	83.264	ENSSFOG00015018904	unkl	77	86.404	Scleropages_formosus
ENSLAFG00000018262	-	100	61.611	ENSSMAG00000005106	unkl	100	64.027	Scophthalmus_maximus
ENSLAFG00000018262	-	94	88.535	ENSSDUG00000019045	unkl	84	88.535	Seriola_dumerili
ENSLAFG00000018262	-	94	88.535	ENSSLDG00000010672	unkl	84	88.535	Seriola_lalandi_dorsalis
ENSLAFG00000018262	-	93	77.507	ENSSPUG00000009763	-	100	58.967	Sphenodon_punctatus
ENSLAFG00000018262	-	94	88.217	ENSSPAG00000017109	unkl	84	88.217	Stegastes_partitus
ENSLAFG00000018262	-	100	76.337	ENSSSCG00000022963	-	100	76.738	Sus_scrofa
ENSLAFG00000018262	-	100	73.618	ENSTRUG00000012086	unkl	83	87.821	Takifugu_rubripes
ENSLAFG00000018262	-	99	65.591	ENSTNIG00000018588	unkl	86	88.411	Tetraodon_nigroviridis
ENSLAFG00000018262	-	54	91.304	ENSTTRG00000011985	-	71	91.304	Tursiops_truncatus
ENSLAFG00000018262	-	75	83.448	ENSVVUG00000011182	-	82	83.448	Vulpes_vulpes
ENSLAFG00000018262	-	100	67.662	ENSXETG00000021599	unkl	100	67.662	Xenopus_tropicalis
ENSLAFG00000018262	-	100	63.685	ENSXCOG00000016491	unkl	100	63.685	Xiphophorus_couchianus
ENSLAFG00000018262	-	100	62.483	ENSXMAG00000009520	unkl	100	62.483	Xiphophorus_maculatus