EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018346 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 7186 bases
Position: chrscaffold_60:9400673-9407858
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	1	6
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	2	6
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	3	6
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	4	6
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	5	6
ENSLAFP00000015375	zf-C2H2	PF00096.26	4.5e-26	6	6
ENSLAFP00000015375	zf-met	PF12874.7	9.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000018346	GFI1-201	1224	-	ENSLAFP00000015375	407 (aa)	-	G3TKL6

Gene Model

Click here to download ENSLAFG00000018346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018346	GFI1	60	41.176	ENSLAFG00000010205	ZFAT	98	41.176
ENSLAFG00000018346	GFI1	59	38.889	ENSLAFG00000002266	ZNF319	84	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018346	GFI1	100	85.782	ENSG00000162676	GFI1	100	85.545	Homo_sapiens
ENSLAFG00000018346	GFI1	100	63.133	ENSAPOG00000015189	gfi1ab	100	63.373	Acanthochromis_polyacanthus
ENSLAFG00000018346	GFI1	100	64.320	ENSACIG00000016354	gfi1ab	100	63.659	Amphilophus_citrinellus
ENSLAFG00000018346	GFI1	100	54.237	ENSAOCG00000008339	gfi1ab	100	54.479	Amphiprion_ocellaris
ENSLAFG00000018346	GFI1	100	63.373	ENSAPEG00000023870	gfi1ab	100	63.614	Amphiprion_percula
ENSLAFG00000018346	GFI1	100	61.220	ENSATEG00000009167	gfi1ab	89	60.976	Anabas_testudineus
ENSLAFG00000018346	GFI1	87	74.309	ENSAPLG00000015700	GFI1	99	74.309	Anas_platyrhynchos
ENSLAFG00000018346	GFI1	100	70.093	ENSACAG00000004498	GFI1	100	70.588	Anolis_carolinensis
ENSLAFG00000018346	GFI1	100	83.886	ENSANAG00000019656	GFI1	100	83.649	Aotus_nancymaae
ENSLAFG00000018346	GFI1	100	63.855	ENSACLG00000026458	gfi1ab	93	62.470	Astatotilapia_calliptera
ENSLAFG00000018346	GFI1	74	60.968	ENSAMXG00000006669	GFI1	59	87.568	Astyanax_mexicanus
ENSLAFG00000018346	GFI1	100	61.463	ENSAMXG00000039600	gfi1ab	100	61.165	Astyanax_mexicanus
ENSLAFG00000018346	GFI1	100	84.834	ENSBTAG00000016723	GFI1	100	85.782	Bos_taurus
ENSLAFG00000018346	GFI1	100	83.255	ENSCJAG00000017609	GFI1	100	83.175	Callithrix_jacchus
ENSLAFG00000018346	GFI1	100	85.545	ENSCAFG00000020155	GFI1	100	86.730	Canis_familiaris
ENSLAFG00000018346	GFI1	100	85.545	ENSCAFG00020013371	GFI1	88	86.730	Canis_lupus_dingo
ENSLAFG00000018346	GFI1	100	85.545	ENSCHIG00000016135	GFI1	100	85.545	Capra_hircus
ENSLAFG00000018346	GFI1	100	84.323	ENSCPOG00000011727	GFI1	100	84.561	Cavia_porcellus
ENSLAFG00000018346	GFI1	100	83.491	ENSCCAG00000036072	GFI1	100	83.886	Cebus_capucinus
ENSLAFG00000018346	GFI1	100	85.782	ENSCATG00000037873	GFI1	100	85.545	Cercocebus_atys
ENSLAFG00000018346	GFI1	100	81.643	ENSCLAG00000005915	GFI1	100	79.493	Chinchilla_lanigera
ENSLAFG00000018346	GFI1	86	83.242	ENSCSAG00000001469	GFI1	100	82.967	Chlorocebus_sabaeus
ENSLAFG00000018346	GFI1	100	85.545	ENSCANG00000034077	GFI1	100	85.308	Colobus_angolensis_palliatus
ENSLAFG00000018346	GFI1	100	80.095	ENSCGRG00001015432	Gfi1	100	79.858	Cricetulus_griseus_chok1gshd
ENSLAFG00000018346	GFI1	100	59.135	ENSCSEG00000017729	GFI1	100	59.005	Cynoglossus_semilaevis
ENSLAFG00000018346	GFI1	100	60.671	ENSCVAG00000011828	gfi1ab	100	58.454	Cyprinodon_variegatus
ENSLAFG00000018346	GFI1	100	58.670	ENSCVAG00000004930	GFI1	100	57.957	Cyprinodon_variegatus
ENSLAFG00000018346	GFI1	100	64.524	ENSDARG00000044457	gfi1ab	100	64.524	Danio_rerio
ENSLAFG00000018346	GFI1	100	86.288	ENSDNOG00000000782	GFI1	97	86.761	Dasypus_novemcinctus
ENSLAFG00000018346	GFI1	100	84.487	ENSEASG00005015509	GFI1	86	85.442	Equus_asinus_asinus
ENSLAFG00000018346	GFI1	92	78.182	ENSECAG00000006647	GFI1	92	79.221	Equus_caballus
ENSLAFG00000018346	GFI1	100	79.665	ENSEEUG00000000198	GFI1	100	79.426	Erinaceus_europaeus
ENSLAFG00000018346	GFI1	100	60.048	ENSELUG00000019033	GFI1	100	59.809	Esox_lucius
ENSLAFG00000018346	GFI1	100	63.679	ENSELUG00000003015	gfi1ab	99	63.033	Esox_lucius
ENSLAFG00000018346	GFI1	100	85.782	ENSFCAG00000005914	GFI1	100	86.730	Felis_catus
ENSLAFG00000018346	GFI1	100	61.374	ENSFHEG00000010997	gfi1ab	100	60.714	Fundulus_heteroclitus
ENSLAFG00000018346	GFI1	100	59.813	ENSFHEG00000000341	GFI1	100	59.907	Fundulus_heteroclitus
ENSLAFG00000018346	GFI1	100	59.529	ENSGMOG00000007737	gfi1ab	100	59.529	Gadus_morhua
ENSLAFG00000018346	GFI1	100	72.813	ENSGALG00000043650	GFI1	100	72.813	Gallus_gallus
ENSLAFG00000018346	GFI1	100	57.339	ENSGAFG00000018063	GFI1	100	60.520	Gambusia_affinis
ENSLAFG00000018346	GFI1	100	61.321	ENSGAFG00000016637	gfi1ab	100	60.664	Gambusia_affinis
ENSLAFG00000018346	GFI1	100	62.439	ENSGACG00000004257	gfi1ab	97	62.110	Gasterosteus_aculeatus
ENSLAFG00000018346	GFI1	100	85.782	ENSGGOG00000005320	GFI1	100	85.545	Gorilla_gorilla
ENSLAFG00000018346	GFI1	100	64.563	ENSHBUG00000011969	gfi1ab	100	63.171	Haplochromis_burtoni
ENSLAFG00000018346	GFI1	100	83.452	ENSHGLG00000008020	GFI1	100	83.848	Heterocephalus_glaber_female
ENSLAFG00000018346	GFI1	100	83.452	ENSHGLG00100000610	GFI1	100	83.848	Heterocephalus_glaber_male
ENSLAFG00000018346	GFI1	100	58.637	ENSHCOG00000019555	GFI1	100	58.637	Hippocampus_comes
ENSLAFG00000018346	GFI1	100	55.904	ENSHCOG00000008590	gfi1ab	100	53.009	Hippocampus_comes
ENSLAFG00000018346	GFI1	100	62.651	ENSIPUG00000010071	gfi1ab	87	62.410	Ictalurus_punctatus
ENSLAFG00000018346	GFI1	100	60.096	ENSIPUG00000013414	GFI1	100	58.768	Ictalurus_punctatus
ENSLAFG00000018346	GFI1	100	83.649	ENSSTOG00000014583	GFI1	100	83.175	Ictidomys_tridecemlineatus
ENSLAFG00000018346	GFI1	100	62.201	ENSKMAG00000003810	gfi1ab	100	61.962	Kryptolebias_marmoratus
ENSLAFG00000018346	GFI1	100	62.708	ENSLBEG00000027776	gfi1ab	100	62.470	Labrus_bergylta
ENSLAFG00000018346	GFI1	100	68.483	ENSLACG00000013362	GFI1	98	68.483	Latimeria_chalumnae
ENSLAFG00000018346	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSLAFG00000018346	GFI1	100	66.351	ENSLOCG00000004711	gfi1ab	100	66.351	Lepisosteus_oculatus
ENSLAFG00000018346	GFI1	100	85.782	ENSMFAG00000045801	GFI1	100	85.545	Macaca_fascicularis
ENSLAFG00000018346	GFI1	100	85.782	ENSMNEG00000036338	GFI1	100	85.545	Macaca_nemestrina
ENSLAFG00000018346	GFI1	100	85.782	ENSMLEG00000036181	GFI1	100	85.545	Mandrillus_leucophaeus
ENSLAFG00000018346	GFI1	100	63.614	ENSMAMG00000008125	gfi1ab	100	62.143	Mastacembelus_armatus
ENSLAFG00000018346	GFI1	100	64.096	ENSMZEG00005009895	gfi1ab	100	62.712	Maylandia_zebra
ENSLAFG00000018346	GFI1	87	75.275	ENSMGAG00000008187	GFI1	100	75.275	Meleagris_gallopavo
ENSLAFG00000018346	GFI1	100	85.071	ENSMICG00000047208	GFI1	100	85.308	Microcebus_murinus
ENSLAFG00000018346	GFI1	100	59.806	ENSMMOG00000005556	gfi1ab	100	59.564	Mola_mola
ENSLAFG00000018346	GFI1	100	75.289	ENSMODG00000011802	GFI1	100	75.520	Monodelphis_domestica
ENSLAFG00000018346	GFI1	100	63.107	ENSMALG00000014672	gfi1ab	100	62.287	Monopterus_albus
ENSLAFG00000018346	GFI1	100	80.615	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSLAFG00000018346	GFI1	100	80.142	ENSMUSG00000029275	Gfi1	100	80.142	Mus_musculus
ENSLAFG00000018346	GFI1	100	79.905	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSLAFG00000018346	GFI1	100	80.142	MGP_SPRETEiJ_G0028507	Gfi1	100	79.905	Mus_spretus
ENSLAFG00000018346	GFI1	100	81.884	ENSMPUG00000004178	GFI1	97	81.884	Mustela_putorius_furo
ENSLAFG00000018346	GFI1	100	82.619	ENSMLUG00000015191	GFI1	97	83.333	Myotis_lucifugus
ENSLAFG00000018346	GFI1	100	61.972	ENSNBRG00000015774	gfi1ab	100	60.417	Neolamprologus_brichardi
ENSLAFG00000018346	GFI1	92	83.632	ENSNLEG00000010470	GFI1	97	83.376	Nomascus_leucogenys
ENSLAFG00000018346	GFI1	100	84.360	ENSOPRG00000001473	GFI1	100	84.360	Ochotona_princeps
ENSLAFG00000018346	GFI1	100	63.768	ENSONIG00000019246	gfi1ab	100	62.379	Oreochromis_niloticus
ENSLAFG00000018346	GFI1	86	83.198	ENSOCUG00000023553	GFI1	93	83.740	Oryctolagus_cuniculus
ENSLAFG00000018346	GFI1	100	61.165	ENSORLG00000013806	gfi1ab	100	60.488	Oryzias_latipes
ENSLAFG00000018346	GFI1	100	59.102	ENSORLG00000005060	GFI1	100	58.005	Oryzias_latipes
ENSLAFG00000018346	GFI1	65	70.037	ENSORLG00020002817	GFI1	80	67.626	Oryzias_latipes_hni
ENSLAFG00000018346	GFI1	100	60.382	ENSORLG00020001602	gfi1ab	100	60.766	Oryzias_latipes_hni
ENSLAFG00000018346	GFI1	100	59.091	ENSORLG00015006070	GFI1	100	58.042	Oryzias_latipes_hsok
ENSLAFG00000018346	GFI1	100	59.048	ENSOMEG00000016722	GFI1	100	59.189	Oryzias_melastigma
ENSLAFG00000018346	GFI1	100	75.362	ENSOGAG00000027913	GFI1	100	75.362	Otolemur_garnettii
ENSLAFG00000018346	GFI1	68	97.143	ENSOARG00000016329	GFI1	94	69.466	Ovis_aries
ENSLAFG00000018346	GFI1	100	76.570	ENSPPAG00000042186	GFI1	100	76.570	Pan_paniscus
ENSLAFG00000018346	GFI1	100	85.782	ENSPPRG00000007521	GFI1	100	86.730	Panthera_pardus
ENSLAFG00000018346	GFI1	100	85.545	ENSPTRG00000043053	GFI1	100	85.308	Pan_troglodytes
ENSLAFG00000018346	GFI1	100	85.782	ENSPANG00000016433	GFI1	100	85.545	Papio_anubis
ENSLAFG00000018346	GFI1	100	64.941	ENSPKIG00000004263	GFI1	100	64.471	Paramormyrops_kingsleyae
ENSLAFG00000018346	GFI1	87	74.451	ENSPSIG00000008734	GFI1	97	74.176	Pelodiscus_sinensis
ENSLAFG00000018346	GFI1	100	60.688	ENSPMGG00000012546	gfi1ab	100	59.564	Periophthalmus_magnuspinnatus
ENSLAFG00000018346	GFI1	100	77.176	ENSPCIG00000013728	GFI1	100	79.059	Phascolarctos_cinereus
ENSLAFG00000018346	GFI1	100	60.849	ENSPFOG00000023214	gfi1ab	100	60.190	Poecilia_formosa
ENSLAFG00000018346	GFI1	100	60.849	ENSPLAG00000010879	gfi1ab	98	73.529	Poecilia_latipinna
ENSLAFG00000018346	GFI1	100	58.974	ENSPLAG00000005376	GFI1	91	61.792	Poecilia_latipinna
ENSLAFG00000018346	GFI1	100	61.085	ENSPMEG00000013694	gfi1ab	100	60.427	Poecilia_mexicana
ENSLAFG00000018346	GFI1	100	58.314	ENSPMEG00000019299	GFI1	100	60.664	Poecilia_mexicana
ENSLAFG00000018346	GFI1	100	61.374	ENSPREG00000014097	gfi1ab	100	59.953	Poecilia_reticulata
ENSLAFG00000018346	GFI1	100	54.398	ENSPREG00000007997	GFI1	100	53.828	Poecilia_reticulata
ENSLAFG00000018346	GFI1	100	76.706	ENSPCAG00000011020	GFI1	100	77.882	Procavia_capensis
ENSLAFG00000018346	GFI1	100	84.834	ENSPCOG00000020540	GFI1	100	85.071	Propithecus_coquereli
ENSLAFG00000018346	GFI1	100	84.248	ENSPVAG00000006928	GFI1	100	85.680	Pteropus_vampyrus
ENSLAFG00000018346	GFI1	100	63.855	ENSPNYG00000021183	gfi1ab	100	62.470	Pundamilia_nyererei
ENSLAFG00000018346	GFI1	100	56.459	ENSPNAG00000028014	GFI1	100	56.355	Pygocentrus_nattereri
ENSLAFG00000018346	GFI1	100	62.530	ENSPNAG00000027258	gfi1ab	100	60.476	Pygocentrus_nattereri
ENSLAFG00000018346	GFI1	100	79.905	ENSRNOG00000002042	Gfi1	100	79.669	Rattus_norvegicus
ENSLAFG00000018346	GFI1	100	86.019	ENSRBIG00000036467	GFI1	100	85.782	Rhinopithecus_bieti
ENSLAFG00000018346	GFI1	100	86.019	ENSRROG00000031687	GFI1	100	85.782	Rhinopithecus_roxellana
ENSLAFG00000018346	GFI1	100	83.886	ENSSBOG00000031300	GFI1	100	83.649	Saimiri_boliviensis_boliviensis
ENSLAFG00000018346	GFI1	100	65.000	ENSSFOG00015020295	gfi1	100	64.762	Scleropages_formosus
ENSLAFG00000018346	GFI1	100	63.095	ENSSMAG00000002782	gfi1ab	100	62.619	Scophthalmus_maximus
ENSLAFG00000018346	GFI1	100	61.779	ENSSDUG00000022410	gfi1ab	100	61.779	Seriola_dumerili
ENSLAFG00000018346	GFI1	100	61.962	ENSSLDG00000020163	gfi1ab	100	61.962	Seriola_lalandi_dorsalis
ENSLAFG00000018346	GFI1	81	78.125	ENSSPAG00000009140	gfi1ab	99	78.125	Stegastes_partitus
ENSLAFG00000018346	GFI1	100	85.407	ENSSSCG00000006902	GFI1	100	86.842	Sus_scrofa
ENSLAFG00000018346	GFI1	87	74.656	ENSTGUG00000006060	GFI1	100	74.656	Taeniopygia_guttata
ENSLAFG00000018346	GFI1	100	61.408	ENSTRUG00000000415	gfi1ab	100	61.165	Takifugu_rubripes
ENSLAFG00000018346	GFI1	100	60.680	ENSTNIG00000000651	gfi1ab	97	61.594	Tetraodon_nigroviridis
ENSLAFG00000018346	GFI1	100	83.649	ENSTTRG00000000082	GFI1	100	84.597	Tursiops_truncatus
ENSLAFG00000018346	GFI1	100	84.337	ENSUAMG00000021124	GFI1	91	84.337	Ursus_americanus
ENSLAFG00000018346	GFI1	100	67.229	ENSXETG00000023006	gfi1	98	67.229	Xenopus_tropicalis
ENSLAFG00000018346	GFI1	86	53.226	ENSXMAG00000009274	GFI1	70	55.041	Xiphophorus_maculatus
ENSLAFG00000018346	GFI1	100	60.900	ENSXMAG00000010523	gfi1ab	100	59.479	Xiphophorus_maculatus