EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000018567 (Gene tree)
Gene ID: -
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 5566 bases
Position: chrscaffold_104:1592808-1598373
Accession: 20155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000026842	RRM_1	PF00076.22	1.5e-33	1	2
ENSLAFP00000026842	RRM_1	PF00076.22	1.5e-33	2	2
ENSLAFP00000018771	RRM_1	PF00076.22	1.5e-33	1	2
ENSLAFP00000018771	RRM_1	PF00076.22	1.5e-33	2	2
ENSLAFP00000024509	RRM_1	PF00076.22	1.6e-33	1	2
ENSLAFP00000024509	RRM_1	PF00076.22	1.6e-33	2	2
ENSLAFP00000015564	RRM_1	PF00076.22	1.7e-33	1	2
ENSLAFP00000015564	RRM_1	PF00076.22	1.7e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031032	RBM23-203	1308	-	ENSLAFP00000024509	436 (aa)	-	G3U9K1
ENSLAFT00000029385	RBM23-204	1290	-	ENSLAFP00000018771	430 (aa)	-	G3TT63
ENSLAFT00000018567	RBM23-201	1344	-	ENSLAFP00000015564	447 (aa)	-	G3TL24
ENSLAFT00000032497	RBM23-202	1296	-	ENSLAFP00000026842	431 (aa)	-	G3UG84

Gene Model

Click here to download ENSLAFG00000018567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000018567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000018567	RBM23	99	59.681	ENSLAFG00000010346	RBM39	82	61.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000018567	RBM23	100	84.687	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSLAFG00000018567	RBM23	100	84.479	ENSAMEG00000007322	RBM23	100	84.257	Ailuropoda_melanoleuca
ENSLAFG00000018567	RBM23	100	68.490	ENSACAG00000001569	RBM23	96	70.870	Anolis_carolinensis
ENSLAFG00000018567	RBM23	100	67.114	ENSANAG00000033790	-	100	68.904	Aotus_nancymaae
ENSLAFG00000018567	RBM23	100	82.151	ENSBTAG00000038333	RBM23	100	81.425	Bos_taurus
ENSLAFG00000018567	RBM23	100	83.259	ENSCJAG00000008482	RBM23	100	84.598	Callithrix_jacchus
ENSLAFG00000018567	RBM23	100	80.093	ENSCAFG00000011217	RBM23	100	79.861	Canis_familiaris
ENSLAFG00000018567	RBM23	100	84.340	ENSCAFG00020007711	RBM23	100	82.774	Canis_lupus_dingo
ENSLAFG00000018567	RBM23	100	82.974	ENSCHIG00000025709	RBM23	100	82.289	Capra_hircus
ENSLAFG00000018567	RBM23	100	86.130	ENSTSYG00000014755	RBM23	100	88.321	Carlito_syrichta
ENSLAFG00000018567	RBM23	100	84.116	ENSCCAG00000025114	-	100	86.130	Cebus_capucinus
ENSLAFG00000018567	RBM23	100	69.575	ENSCCAG00000028584	-	99	75.735	Cebus_capucinus
ENSLAFG00000018567	RBM23	100	85.151	ENSCATG00000017832	RBM23	100	85.816	Cercocebus_atys
ENSLAFG00000018567	RBM23	100	85.144	ENSCSAG00000016213	RBM23	100	81.960	Chlorocebus_sabaeus
ENSLAFG00000018567	RBM23	100	66.890	ENSCPBG00000026096	RBM23	96	70.588	Chrysemys_picta_bellii
ENSLAFG00000018567	RBM23	95	84.146	ENSCANG00000001893	RBM23	100	82.524	Colobus_angolensis_palliatus
ENSLAFG00000018567	RBM23	100	85.235	ENSDNOG00000032457	RBM23	100	85.235	Dasypus_novemcinctus
ENSLAFG00000018567	RBM23	64	86.131	ENSDORG00000004926	-	100	86.131	Dipodomys_ordii
ENSLAFG00000018567	RBM23	52	76.667	ENSETEG00000017915	-	92	78.022	Echinops_telfairi
ENSLAFG00000018567	RBM23	97	84.368	ENSEASG00005011696	RBM23	96	84.368	Equus_asinus_asinus
ENSLAFG00000018567	RBM23	100	83.641	ENSECAG00000009910	RBM23	100	83.641	Equus_caballus
ENSLAFG00000018567	RBM23	100	81.696	ENSEEUG00000015560	RBM23	100	79.596	Erinaceus_europaeus
ENSLAFG00000018567	RBM23	100	84.455	ENSFCAG00000006632	RBM23	100	87.007	Felis_catus
ENSLAFG00000018567	RBM23	100	85.615	ENSGGOG00000015707	RBM23	100	84.687	Gorilla_gorilla
ENSLAFG00000018567	RBM23	100	79.195	ENSHGLG00100006114	RBM23	99	80.313	Heterocephalus_glaber_male
ENSLAFG00000018567	RBM23	64	86.861	ENSSTOG00000010354	RBM23	100	86.861	Ictidomys_tridecemlineatus
ENSLAFG00000018567	RBM23	100	85.057	ENSMFAG00000037595	RBM23	100	83.218	Macaca_fascicularis
ENSLAFG00000018567	RBM23	100	84.828	ENSMMUG00000018381	RBM23	100	81.839	Macaca_mulatta
ENSLAFG00000018567	RBM23	100	85.847	ENSMNEG00000042442	RBM23	100	83.991	Macaca_nemestrina
ENSLAFG00000018567	RBM23	100	81.922	ENSMLEG00000039954	RBM23	100	80.092	Mandrillus_leucophaeus
ENSLAFG00000018567	RBM23	100	87.248	ENSMICG00000006364	RBM23	100	87.956	Microcebus_murinus
ENSLAFG00000018567	RBM23	100	82.379	ENSMODG00000024448	RBM23	100	83.700	Monodelphis_domestica
ENSLAFG00000018567	RBM23	100	84.821	ENSMPUG00000007151	RBM23	100	81.473	Mustela_putorius_furo
ENSLAFG00000018567	RBM23	100	75.839	ENSMLUG00000012923	RBM23	100	77.181	Myotis_lucifugus
ENSLAFG00000018567	RBM23	100	84.793	ENSNLEG00000014792	RBM23	100	85.945	Nomascus_leucogenys
ENSLAFG00000018567	RBM23	53	94.161	ENSMEUG00000014548	-	53	94.161	Notamacropus_eugenii
ENSLAFG00000018567	RBM23	74	85.047	ENSOPRG00000001092	RBM23	100	83.445	Ochotona_princeps
ENSLAFG00000018567	RBM23	70	51.429	ENSOANG00000008908	-	100	49.346	Ornithorhynchus_anatinus
ENSLAFG00000018567	RBM23	74	87.382	ENSOCUG00000002006	RBM23	100	85.746	Oryctolagus_cuniculus
ENSLAFG00000018567	RBM23	99	76.471	ENSOGAG00000014794	RBM23	100	77.143	Otolemur_garnettii
ENSLAFG00000018567	RBM23	100	82.112	ENSOARG00000019398	RBM23	100	81.425	Ovis_aries
ENSLAFG00000018567	RBM23	100	84.562	ENSPPAG00000037922	RBM23	100	85.484	Pan_paniscus
ENSLAFG00000018567	RBM23	100	84.455	ENSPPRG00000023344	RBM23	100	86.775	Panthera_pardus
ENSLAFG00000018567	RBM23	100	74.890	ENSPTIG00000007831	RBM23	100	85.615	Panthera_tigris_altaica
ENSLAFG00000018567	RBM23	100	84.101	ENSPTRG00000006151	RBM23	100	85.484	Pan_troglodytes
ENSLAFG00000018567	RBM23	95	84.578	ENSPANG00000001324	RBM23	100	87.097	Papio_anubis
ENSLAFG00000018567	RBM23	100	82.314	ENSPCIG00000027773	RBM23	100	80.349	Phascolarctos_cinereus
ENSLAFG00000018567	RBM23	100	84.919	ENSPPYG00000005649	RBM23	100	85.847	Pongo_abelii
ENSLAFG00000018567	RBM23	100	66.890	ENSPCAG00000006669	RBM23	100	68.213	Procavia_capensis
ENSLAFG00000018567	RBM23	100	87.248	ENSPCOG00000018564	RBM23	100	87.956	Propithecus_coquereli
ENSLAFG00000018567	RBM23	100	83.036	ENSPVAG00000013785	RBM23	100	80.543	Pteropus_vampyrus
ENSLAFG00000018567	RBM23	100	84.368	ENSRBIG00000039276	RBM23	100	82.759	Rhinopithecus_bieti
ENSLAFG00000018567	RBM23	100	84.368	ENSRROG00000044026	RBM23	100	82.759	Rhinopithecus_roxellana
ENSLAFG00000018567	RBM23	96	66.589	ENSSBOG00000034977	-	100	66.589	Saimiri_boliviensis_boliviensis
ENSLAFG00000018567	RBM23	100	87.302	ENSSBOG00000023037	-	100	70.917	Saimiri_boliviensis_boliviensis
ENSLAFG00000018567	RBM23	73	89.241	ENSSHAG00000012932	RBM23	100	80.568	Sarcophilus_harrisii
ENSLAFG00000018567	RBM23	100	82.040	ENSSARG00000005165	RBM23	100	83.370	Sorex_araneus
ENSLAFG00000018567	RBM23	100	69.495	ENSSPUG00000000489	RBM23	96	70.776	Sphenodon_punctatus
ENSLAFG00000018567	RBM23	100	82.910	ENSSSCG00000026700	RBM23	100	86.605	Sus_scrofa
ENSLAFG00000018567	RBM23	100	80.220	ENSTBEG00000011543	RBM23	100	82.418	Tupaia_belangeri
ENSLAFG00000018567	RBM23	100	85.235	ENSTTRG00000001500	RBM23	100	85.235	Tursiops_truncatus
ENSLAFG00000018567	RBM23	100	84.340	ENSUAMG00000008524	RBM23	100	85.235	Ursus_americanus
ENSLAFG00000018567	RBM23	100	84.340	ENSUMAG00000014075	RBM23	100	85.235	Ursus_maritimus
ENSLAFG00000018567	RBM23	100	84.787	ENSVVUG00000019815	RBM23	100	83.221	Vulpes_vulpes
ENSLAFG00000018567	RBM23	70	72.876	ENSXETG00000022623	rbm23	100	64.254	Xenopus_tropicalis