EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000020807 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 878 bases
Position: chrscaffold_11:49445194-49446071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015888	RRM_1	PF00076.22	8.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000020502	-	444	-	ENSLAFP00000015888	148 (aa)	-	G3TLQ7

Gene Model

Click here to download ENSLAFG00000020807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000020807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000020807	-	53	35.294	ENSLAFG00000030769	-	57	40.816
ENSLAFG00000020807	-	52	38.961	ENSLAFG00000006902	HNRNPA2B1	50	38.961
ENSLAFG00000020807	-	57	32.000	ENSLAFG00000009938	ELAVL2	65	31.579
ENSLAFG00000020807	-	57	32.558	ENSLAFG00000001087	ELAVL4	71	32.558
ENSLAFG00000020807	-	66	45.361	ENSLAFG00000007003	-	51	50.633
ENSLAFG00000020807	-	54	41.250	ENSLAFG00000029211	-	50	41.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000020807	-	56	86.747	ENSG00000147274	RBMX	83	89.231	Homo_sapiens
ENSLAFG00000020807	-	56	84.337	ENSG00000213516	RBMXL1	53	84.337	Homo_sapiens
ENSLAFG00000020807	-	56	86.747	ENSANAG00000037179	-	84	88.571	Aotus_nancymaae
ENSLAFG00000020807	-	56	83.133	ENSANAG00000028483	-	72	83.824	Aotus_nancymaae
ENSLAFG00000020807	-	59	85.227	ENSANAG00000028304	RBMX	83	89.231	Aotus_nancymaae
ENSLAFG00000020807	-	56	86.747	ENSCJAG00000040528	-	83	89.231	Callithrix_jacchus
ENSLAFG00000020807	-	56	86.747	ENSCAFG00020024552	RBMXL1	80	87.879	Canis_lupus_dingo
ENSLAFG00000020807	-	65	70.833	ENSCAFG00020008202	-	68	72.727	Canis_lupus_dingo
ENSLAFG00000020807	-	56	86.747	ENSCPOG00000012164	RBMX	82	86.905	Cavia_porcellus
ENSLAFG00000020807	-	57	84.524	ENSCCAG00000037368	-	87	84.524	Cebus_capucinus
ENSLAFG00000020807	-	56	86.747	ENSCATG00000034355	-	83	89.231	Cercocebus_atys
ENSLAFG00000020807	-	51	76.000	ENSCATG00000032253	-	91	76.000	Cercocebus_atys
ENSLAFG00000020807	-	56	86.747	ENSCANG00000031609	-	83	89.231	Colobus_angolensis_palliatus
ENSLAFG00000020807	-	56	86.747	ENSCANG00000038825	-	81	79.747	Colobus_angolensis_palliatus
ENSLAFG00000020807	-	85	73.228	ENSCGRG00000001522	Rbmx	82	86.905	Cricetulus_griseus_crigri
ENSLAFG00000020807	-	65	83.333	ENSDORG00000015481	-	82	86.905	Dipodomys_ordii
ENSLAFG00000020807	-	50	79.730	ENSHGLG00000006125	-	52	79.730	Heterocephalus_glaber_female
ENSLAFG00000020807	-	56	86.747	ENSHGLG00000011055	RBMX	81	86.747	Heterocephalus_glaber_female
ENSLAFG00000020807	-	54	66.250	ENSHGLG00100000887	-	91	65.060	Heterocephalus_glaber_male
ENSLAFG00000020807	-	56	86.747	ENSHGLG00100001361	-	81	86.747	Heterocephalus_glaber_male
ENSLAFG00000020807	-	59	85.227	ENSMFAG00000032479	RBMX	83	89.231	Macaca_fascicularis
ENSLAFG00000020807	-	56	86.747	ENSMMUG00000040370	-	57	84.706	Macaca_mulatta
ENSLAFG00000020807	-	59	85.227	ENSMNEG00000033588	-	83	89.231	Macaca_nemestrina
ENSLAFG00000020807	-	51	76.000	ENSMNEG00000027176	-	91	76.000	Macaca_nemestrina
ENSLAFG00000020807	-	59	85.227	ENSMLEG00000021095	-	83	89.231	Mandrillus_leucophaeus
ENSLAFG00000020807	-	94	62.590	ENSMICG00000031444	-	81	86.154	Microcebus_murinus
ENSLAFG00000020807	-	53	78.481	ENSMICG00000030109	-	57	83.582	Microcebus_murinus
ENSLAFG00000020807	-	65	83.333	MGP_CAROLIEiJ_G0033098	Rbmx	82	86.905	Mus_caroli
ENSLAFG00000020807	-	65	83.333	ENSMUSG00000031134	Rbmx	82	86.905	Mus_musculus
ENSLAFG00000020807	-	65	83.333	MGP_PahariEiJ_G0031641	Rbmx	82	86.905	Mus_pahari
ENSLAFG00000020807	-	65	83.333	MGP_SPRETEiJ_G0034253	Rbmx	82	86.905	Mus_spretus
ENSLAFG00000020807	-	56	78.313	ENSNGAG00000011475	-	59	72.152	Nannospalax_galili
ENSLAFG00000020807	-	59	85.227	ENSPPAG00000028409	-	83	89.231	Pan_paniscus
ENSLAFG00000020807	-	59	85.227	ENSPTRG00000052587	RBMX	83	89.231	Pan_troglodytes
ENSLAFG00000020807	-	59	85.227	ENSPANG00000018448	-	83	89.231	Papio_anubis
ENSLAFG00000020807	-	51	84.000	ENSPANG00000030653	-	90	84.000	Papio_anubis
ENSLAFG00000020807	-	51	64.000	ENSPCIG00000018117	-	77	64.000	Phascolarctos_cinereus
ENSLAFG00000020807	-	57	83.333	ENSPPYG00000019152	-	65	83.333	Pongo_abelii
ENSLAFG00000020807	-	59	85.227	ENSRBIG00000042033	-	83	89.231	Rhinopithecus_bieti
ENSLAFG00000020807	-	51	75.000	ENSRBIG00000030841	-	92	75.000	Rhinopithecus_bieti
ENSLAFG00000020807	-	59	71.910	ENSRROG00000034426	-	69	83.582	Rhinopithecus_roxellana
ENSLAFG00000020807	-	59	85.227	ENSRROG00000041167	-	83	89.231	Rhinopithecus_roxellana
ENSLAFG00000020807	-	99	59.603	ENSSBOG00000026502	-	87	84.524	Saimiri_boliviensis_boliviensis