EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000020835 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 51889 bases
Position: chrscaffold_126:916485-968373
Accession: 8651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015733	KH_1	PF00013.29	2.5e-50	1	3
ENSLAFP00000015733	KH_1	PF00013.29	2.5e-50	2	3
ENSLAFP00000015733	KH_1	PF00013.29	2.5e-50	3	3
ENSLAFP00000022452	KH_1	PF00013.29	4e-39	1	2
ENSLAFP00000022452	KH_1	PF00013.29	4e-39	2	2
ENSLAFP00000026802	KH_1	PF00013.29	5.6e-39	1	2
ENSLAFP00000026802	KH_1	PF00013.29	5.6e-39	2	2
ENSLAFP00000015733	KH_2	PF07650.17	1.3e-12	1	1
ENSLAFP00000026802	KH_2	PF07650.17	1e-10	1	1
ENSLAFP00000022452	KH_2	PF07650.17	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000020956	PCBP3-201	1017	-	ENSLAFP00000015733	338 (aa)	-	G3TLG5
ENSLAFT00000030266	PCBP3-202	795	-	ENSLAFP00000026802	264 (aa)	-	G3UG44
ENSLAFT00000034517	PCBP3-203	720	-	ENSLAFP00000022452	239 (aa)	-	G3U3P4

Gene Model

Click here to download ENSLAFG00000020835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000020835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000020835	PCBP3	96	61.572	ENSLAFG00000010732	PCBP4	74	58.333
ENSLAFG00000020835	PCBP3	68	36.364	ENSLAFG00000003273	FUBP1	59	36.364
ENSLAFG00000020835	PCBP3	95	42.254	ENSLAFG00000025917	NOVA2	59	40.351
ENSLAFG00000020835	PCBP3	92	31.724	ENSLAFG00000011611	FUBP3	68	31.724
ENSLAFG00000020835	PCBP3	99	66.846	ENSLAFG00000013187	-	99	66.846
ENSLAFG00000020835	PCBP3	69	51.429	ENSLAFG00000026567	HNRNPK	55	50.000
ENSLAFG00000020835	PCBP3	90	35.833	ENSLAFG00000017156	IGF2BP2	67	35.833
ENSLAFG00000020835	PCBP3	99	66.213	ENSLAFG00000025534	-	99	66.213
ENSLAFG00000020835	PCBP3	70	31.132	ENSLAFG00000002426	KHSRP	58	35.938
ENSLAFG00000020835	PCBP3	94	40.845	ENSLAFG00000006455	NOVA1	64	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000020835	PCBP3	100	98.745	ENSG00000183570	PCBP3	100	91.160	Homo_sapiens
ENSLAFG00000020835	PCBP3	100	73.770	ENSAPOG00000023735	zgc:110045	99	70.262	Acanthochromis_polyacanthus
ENSLAFG00000020835	PCBP3	99	68.314	ENSACIG00000002577	zgc:110045	96	74.286	Amphilophus_citrinellus
ENSLAFG00000020835	PCBP3	80	73.171	ENSAOCG00000005266	zgc:110045	97	73.171	Amphiprion_ocellaris
ENSLAFG00000020835	PCBP3	96	74.359	ENSAPEG00000000729	zgc:110045	69	74.359	Amphiprion_percula
ENSLAFG00000020835	PCBP3	93	73.333	ENSATEG00000011191	zgc:110045	65	73.333	Anabas_testudineus
ENSLAFG00000020835	PCBP3	96	75.214	ENSACLG00000019285	zgc:110045	69	75.214	Astatotilapia_calliptera
ENSLAFG00000020835	PCBP3	100	99.163	ENSBTAG00000030775	PCBP3	100	91.436	Bos_taurus
ENSLAFG00000020835	PCBP3	100	97.935	ENSCAFG00000011907	PCBP3	91	97.935	Canis_familiaris
ENSLAFG00000020835	PCBP3	100	97.929	ENSCHIG00000015841	PCBP3	90	97.929	Capra_hircus
ENSLAFG00000020835	PCBP3	85	84.874	ENSTSYG00000005254	PCBP3	94	84.874	Carlito_syrichta
ENSLAFG00000020835	PCBP3	99	85.771	ENSCAPG00000006767	PCBP3	84	78.466	Cavia_aperea
ENSLAFG00000020835	PCBP3	100	97.935	ENSCPOG00000003648	PCBP3	92	97.935	Cavia_porcellus
ENSLAFG00000020835	PCBP3	100	98.745	ENSCCAG00000024561	PCBP3	91	97.640	Cebus_capucinus
ENSLAFG00000020835	PCBP3	100	98.745	ENSCATG00000038419	PCBP3	100	91.714	Cercocebus_atys
ENSLAFG00000020835	PCBP3	100	97.935	ENSCLAG00000006667	PCBP3	91	97.935	Chinchilla_lanigera
ENSLAFG00000020835	PCBP3	100	98.745	ENSCANG00000026757	PCBP3	100	91.160	Colobus_angolensis_palliatus
ENSLAFG00000020835	PCBP3	100	97.935	ENSCGRG00001006836	Pcbp3	91	97.935	Cricetulus_griseus_chok1gshd
ENSLAFG00000020835	PCBP3	100	97.935	ENSCGRG00000001837	Pcbp3	91	97.935	Cricetulus_griseus_crigri
ENSLAFG00000020835	PCBP3	100	73.361	ENSCSEG00000010020	zgc:110045	95	73.361	Cynoglossus_semilaevis
ENSLAFG00000020835	PCBP3	78	75.000	ENSCVAG00000004726	zgc:110045	89	75.000	Cyprinodon_variegatus
ENSLAFG00000020835	PCBP3	79	75.000	ENSDARG00000057141	zgc:110045	94	75.000	Danio_rerio
ENSLAFG00000020835	PCBP3	100	96.460	ENSDNOG00000049518	PCBP3	92	96.460	Dasypus_novemcinctus
ENSLAFG00000020835	PCBP3	88	83.265	ENSDORG00000003640	Pcbp3	99	83.265	Dipodomys_ordii
ENSLAFG00000020835	PCBP3	93	73.543	ENSEBUG00000009697	zgc:110045	96	75.773	Eptatretus_burgeri
ENSLAFG00000020835	PCBP3	100	98.745	ENSEASG00005007068	PCBP3	87	98.745	Equus_asinus_asinus
ENSLAFG00000020835	PCBP3	100	98.745	ENSECAG00000012413	PCBP3	87	98.745	Equus_caballus
ENSLAFG00000020835	PCBP3	96	72.458	ENSELUG00000019784	zgc:110045	72	69.552	Esox_lucius
ENSLAFG00000020835	PCBP3	100	98.745	ENSFCAG00000014812	PCBP3	91	97.640	Felis_catus
ENSLAFG00000020835	PCBP3	100	98.326	ENSFDAG00000009117	PCBP3	91	97.345	Fukomys_damarensis
ENSLAFG00000020835	PCBP3	96	66.374	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSLAFG00000020835	PCBP3	100	70.238	ENSGMOG00000005953	zgc:110045	98	67.147	Gadus_morhua
ENSLAFG00000020835	PCBP3	79	76.214	ENSGAFG00000017864	zgc:110045	91	76.214	Gambusia_affinis
ENSLAFG00000020835	PCBP3	100	73.770	ENSGACG00000003044	zgc:110045	99	69.767	Gasterosteus_aculeatus
ENSLAFG00000020835	PCBP3	100	98.745	ENSGGOG00000003683	PCBP3	92	97.345	Gorilla_gorilla
ENSLAFG00000020835	PCBP3	100	74.590	ENSHBUG00000012495	zgc:110045	99	70.845	Haplochromis_burtoni
ENSLAFG00000020835	PCBP3	100	97.345	ENSHGLG00000018620	PCBP3	92	97.345	Heterocephalus_glaber_female
ENSLAFG00000020835	PCBP3	100	97.345	ENSHGLG00100013590	PCBP3	92	97.345	Heterocephalus_glaber_male
ENSLAFG00000020835	PCBP3	99	63.248	ENSHCOG00000000818	zgc:110045	96	73.206	Hippocampus_comes
ENSLAFG00000020835	PCBP3	78	72.464	ENSIPUG00000003932	zgc:110045	77	72.464	Ictalurus_punctatus
ENSLAFG00000020835	PCBP3	100	97.935	ENSSTOG00000007178	PCBP3	91	97.935	Ictidomys_tridecemlineatus
ENSLAFG00000020835	PCBP3	100	97.640	ENSJJAG00000021192	Pcbp3	91	97.640	Jaculus_jaculus
ENSLAFG00000020835	PCBP3	93	68.161	ENSKMAG00000016179	-	90	77.778	Kryptolebias_marmoratus
ENSLAFG00000020835	PCBP3	99	68.805	ENSLBEG00000023074	zgc:110045	99	68.805	Labrus_bergylta
ENSLAFG00000020835	PCBP3	100	98.745	ENSMFAG00000034574	PCBP3	100	91.714	Macaca_fascicularis
ENSLAFG00000020835	PCBP3	100	98.745	ENSMMUG00000003825	PCBP3	91	97.640	Macaca_mulatta
ENSLAFG00000020835	PCBP3	100	98.745	ENSMNEG00000035551	PCBP3	96	98.745	Macaca_nemestrina
ENSLAFG00000020835	PCBP3	100	98.745	ENSMLEG00000038785	PCBP3	100	91.714	Mandrillus_leucophaeus
ENSLAFG00000020835	PCBP3	95	74.249	ENSMAMG00000014389	zgc:110045	99	70.482	Mastacembelus_armatus
ENSLAFG00000020835	PCBP3	96	75.214	ENSMZEG00005011785	zgc:110045	69	75.214	Maylandia_zebra
ENSLAFG00000020835	PCBP3	100	97.640	ENSMAUG00000007036	Pcbp3	91	97.640	Mesocricetus_auratus
ENSLAFG00000020835	PCBP3	100	99.163	ENSMICG00000012679	PCBP3	91	97.640	Microcebus_murinus
ENSLAFG00000020835	PCBP3	100	97.640	ENSMOCG00000016127	Pcbp3	91	97.640	Microtus_ochrogaster
ENSLAFG00000020835	PCBP3	81	81.006	ENSMMOG00000008399	zgc:110045	85	81.006	Mola_mola
ENSLAFG00000020835	PCBP3	85	76.562	ENSMALG00000008763	zgc:110045	90	76.562	Monopterus_albus
ENSLAFG00000020835	PCBP3	100	97.935	MGP_CAROLIEiJ_G0015475	Pcbp3	100	98.758	Mus_caroli
ENSLAFG00000020835	PCBP3	100	97.935	ENSMUSG00000001120	Pcbp3	99	98.758	Mus_musculus
ENSLAFG00000020835	PCBP3	100	97.935	MGP_PahariEiJ_G0030889	Pcbp3	100	98.758	Mus_pahari
ENSLAFG00000020835	PCBP3	100	97.935	MGP_SPRETEiJ_G0016288	Pcbp3	100	98.758	Mus_spretus
ENSLAFG00000020835	PCBP3	100	93.561	ENSMLUG00000003074	PCBP3	91	92.625	Myotis_lucifugus
ENSLAFG00000020835	PCBP3	100	97.640	ENSNGAG00000005416	Pcbp3	91	97.640	Nannospalax_galili
ENSLAFG00000020835	PCBP3	96	75.214	ENSNBRG00000017646	zgc:110045	69	75.214	Neolamprologus_brichardi
ENSLAFG00000020835	PCBP3	100	98.745	ENSNLEG00000002639	PCBP3	91	97.640	Nomascus_leucogenys
ENSLAFG00000020835	PCBP3	100	85.635	ENSMEUG00000012960	PCBP3	100	85.635	Notamacropus_eugenii
ENSLAFG00000020835	PCBP3	100	97.633	ENSODEG00000012873	PCBP3	92	97.633	Octodon_degus
ENSLAFG00000020835	PCBP3	96	75.214	ENSONIG00000010370	zgc:110045	73	75.214	Oreochromis_niloticus
ENSLAFG00000020835	PCBP3	94	88.129	ENSOANG00000006265	PCBP3	98	88.129	Ornithorhynchus_anatinus
ENSLAFG00000020835	PCBP3	96	74.359	ENSORLG00000014385	-	69	74.359	Oryzias_latipes
ENSLAFG00000020835	PCBP3	96	73.932	ENSORLG00020003139	zgc:110045	86	73.810	Oryzias_latipes_hni
ENSLAFG00000020835	PCBP3	96	73.932	ENSOMEG00000015459	-	69	73.932	Oryzias_melastigma
ENSLAFG00000020835	PCBP3	100	90.294	ENSOARG00000012704	PCBP3	91	90.294	Ovis_aries
ENSLAFG00000020835	PCBP3	100	98.745	ENSPPAG00000021940	PCBP3	91	97.640	Pan_paniscus
ENSLAFG00000020835	PCBP3	100	98.745	ENSPPRG00000003933	PCBP3	91	97.640	Panthera_pardus
ENSLAFG00000020835	PCBP3	100	82.164	ENSPTIG00000012038	PCBP3	91	83.186	Panthera_tigris_altaica
ENSLAFG00000020835	PCBP3	100	78.750	ENSPTRG00000014010	PCBP3	100	70.799	Pan_troglodytes
ENSLAFG00000020835	PCBP3	100	98.745	ENSPANG00000023631	PCBP3	100	91.714	Papio_anubis
ENSLAFG00000020835	PCBP3	77	92.063	ENSPMGG00000022531	-	92	75.000	Periophthalmus_magnuspinnatus
ENSLAFG00000020835	PCBP3	96	66.667	ENSPMGG00000021588	-	72	61.471	Periophthalmus_magnuspinnatus
ENSLAFG00000020835	PCBP3	100	97.935	ENSPEMG00000000587	Pcbp3	91	97.935	Peromyscus_maniculatus_bairdii
ENSLAFG00000020835	PCBP3	98	73.640	ENSPFOG00000002348	zgc:110045	98	70.118	Poecilia_formosa
ENSLAFG00000020835	PCBP3	78	75.610	ENSPLAG00000017488	zgc:110045	90	75.610	Poecilia_latipinna
ENSLAFG00000020835	PCBP3	97	71.674	ENSPMEG00000012762	zgc:110045	91	76.214	Poecilia_mexicana
ENSLAFG00000020835	PCBP3	96	74.359	ENSPREG00000001797	zgc:110045	94	74.528	Poecilia_reticulata
ENSLAFG00000020835	PCBP3	86	97.590	ENSPPYG00000011525	-	92	97.590	Pongo_abelii
ENSLAFG00000020835	PCBP3	95	78.148	ENSPCAG00000001454	PCBP3	100	74.571	Procavia_capensis
ENSLAFG00000020835	PCBP3	100	99.163	ENSPCOG00000013797	PCBP3	91	97.640	Propithecus_coquereli
ENSLAFG00000020835	PCBP3	85	86.957	ENSPVAG00000000832	PCBP3	83	86.957	Pteropus_vampyrus
ENSLAFG00000020835	PCBP3	88	74.762	ENSPNYG00000004637	zgc:110045	96	74.762	Pundamilia_nyererei
ENSLAFG00000020835	PCBP3	95	72.727	ENSPNAG00000004501	zgc:110045	94	75.829	Pygocentrus_nattereri
ENSLAFG00000020835	PCBP3	100	98.745	ENSRROG00000034567	PCBP3	91	97.640	Rhinopithecus_roxellana
ENSLAFG00000020835	PCBP3	100	99.163	ENSSBOG00000005789	PCBP3	92	98.171	Saimiri_boliviensis_boliviensis
ENSLAFG00000020835	PCBP3	96	74.359	ENSSMAG00000013541	zgc:110045	91	73.611	Scophthalmus_maximus
ENSLAFG00000020835	PCBP3	93	75.877	ENSSDUG00000019371	zgc:110045	66	75.877	Seriola_dumerili
ENSLAFG00000020835	PCBP3	96	74.786	ENSSLDG00000021064	zgc:110045	69	74.786	Seriola_lalandi_dorsalis
ENSLAFG00000020835	PCBP3	85	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSLAFG00000020835	PCBP3	100	74.180	ENSSPAG00000000563	zgc:110045	99	70.554	Stegastes_partitus
ENSLAFG00000020835	PCBP3	100	98.745	ENSSSCG00000023041	PCBP3	87	98.745	Sus_scrofa
ENSLAFG00000020835	PCBP3	83	80.108	ENSTRUG00000017789	zgc:110045	92	80.108	Takifugu_rubripes
ENSLAFG00000020835	PCBP3	78	78.613	ENSTNIG00000003546	zgc:110045	85	78.613	Tetraodon_nigroviridis
ENSLAFG00000020835	PCBP3	69	77.682	ENSTBEG00000011882	-	73	77.682	Tupaia_belangeri
ENSLAFG00000020835	PCBP3	100	99.163	ENSUAMG00000006491	PCBP3	100	93.023	Ursus_americanus
ENSLAFG00000020835	PCBP3	100	87.427	ENSUMAG00000025403	PCBP3	91	87.427	Ursus_maritimus
ENSLAFG00000020835	PCBP3	100	90.533	ENSVVUG00000023862	PCBP3	100	84.527	Vulpes_vulpes
ENSLAFG00000020835	PCBP3	68	80.745	ENSXCOG00000005968	zgc:110045	82	80.745	Xiphophorus_couchianus
ENSLAFG00000020835	PCBP3	96	73.932	ENSXMAG00000008030	zgc:110045	70	73.932	Xiphophorus_maculatus