EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000020906 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 12283 bases
Position: chrscaffold_73:6494324-6506606
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000015727	APOBEC_N	PF08210.11	5e-68	1	2
ENSLAFP00000015727	APOBEC_N	PF08210.11	5e-68	2	2
ENSLAFP00000015727	APOBEC_C	PF05240.14	1e-39	1	2
ENSLAFP00000015727	APOBEC_C	PF05240.14	1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000020499	-	1176	-	ENSLAFP00000015727	392 (aa)	-	G3TLG1

Gene Model

Click here to download ENSLAFG00000020906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000020906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000020906	-	92	34.232	ENSLAFG00000027404	-	99	34.109
ENSLAFG00000020906	-	70	33.813	ENSLAFG00000030837	APOBEC1	59	33.813
ENSLAFG00000020906	-	90	81.564	ENSLAFG00000005275	-	99	81.564
ENSLAFG00000020906	-	89	43.017	ENSLAFG00000000721	AICDA	90	43.017
ENSLAFG00000020906	-	92	56.977	ENSLAFG00000008890	-	92	55.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000020906	-	94	48.889	ENSG00000239713	APOBEC3G	95	47.778	Homo_sapiens
ENSLAFG00000020906	-	87	47.120	ENSAMEG00000010815	-	85	47.120	Ailuropoda_melanoleuca
ENSLAFG00000020906	-	97	42.995	ENSANAG00000031271	APOBEC3G	97	42.523	Aotus_nancymaae
ENSLAFG00000020906	-	87	38.418	ENSANAG00000027961	-	96	37.960	Aotus_nancymaae
ENSLAFG00000020906	-	93	43.407	ENSANAG00000028416	-	96	43.333	Aotus_nancymaae
ENSLAFG00000020906	-	92	56.915	ENSANAG00000020573	-	94	56.915	Aotus_nancymaae
ENSLAFG00000020906	-	88	44.920	ENSBTAG00000037800	-	98	44.920	Bos_taurus
ENSLAFG00000020906	-	97	45.596	ENSCJAG00000023368	APOBEC3G	97	45.078	Callithrix_jacchus
ENSLAFG00000020906	-	90	52.356	ENSCJAG00000011578	-	77	52.356	Callithrix_jacchus
ENSLAFG00000020906	-	67	48.800	ENSCAFG00000023589	-	96	48.800	Canis_familiaris
ENSLAFG00000020906	-	94	42.347	ENSCAFG00000015211	-	97	42.347	Canis_familiaris
ENSLAFG00000020906	-	94	41.206	ENSCAFG00020002641	-	84	41.753	Canis_lupus_dingo
ENSLAFG00000020906	-	94	40.404	ENSCAFG00020002661	-	83	41.451	Canis_lupus_dingo
ENSLAFG00000020906	-	89	44.681	ENSCHIG00000012694	-	90	44.385	Capra_hircus
ENSLAFG00000020906	-	97	45.596	ENSCCAG00000032232	-	96	45.078	Cebus_capucinus
ENSLAFG00000020906	-	93	56.915	ENSCCAG00000030928	-	91	56.915	Cebus_capucinus
ENSLAFG00000020906	-	97	39.378	ENSCCAG00000032509	-	98	38.542	Cebus_capucinus
ENSLAFG00000020906	-	97	50.735	ENSCCAG00000033147	-	93	44.591	Cebus_capucinus
ENSLAFG00000020906	-	97	45.304	ENSCSAG00000006376	APOBEC3G	89	44.199	Chlorocebus_sabaeus
ENSLAFG00000020906	-	97	51.515	ENSCANG00000029968	-	74	51.515	Colobus_angolensis_palliatus
ENSLAFG00000020906	-	84	38.217	ENSDNOG00000039749	-	79	38.217	Dasypus_novemcinctus
ENSLAFG00000020906	-	93	50.265	ENSEASG00005018643	-	81	50.265	Equus_asinus_asinus
ENSLAFG00000020906	-	88	52.096	ENSECAG00000032756	-	65	52.096	Equus_caballus
ENSLAFG00000020906	-	94	52.381	ENSECAG00000022371	APOBEC3Z1B	83	52.381	Equus_caballus
ENSLAFG00000020906	-	94	48.889	ENSGGOG00000013750	APOBEC3G	98	47.778	Gorilla_gorilla
ENSLAFG00000020906	-	86	33.158	ENSHCOG00000007604	-	51	33.158	Hippocampus_comes
ENSLAFG00000020906	-	98	44.928	ENSMFAG00000044711	APOBEC3G	86	43.961	Macaca_fascicularis
ENSLAFG00000020906	-	97	46.875	ENSMMUG00000039346	APOBEC3G	94	45.833	Macaca_mulatta
ENSLAFG00000020906	-	98	45.146	ENSMNEG00000038847	APOBEC3G	94	44.175	Macaca_nemestrina
ENSLAFG00000020906	-	98	47.917	ENSMLEG00000024444	APOBEC3G	96	46.875	Mandrillus_leucophaeus
ENSLAFG00000020906	-	90	59.043	ENSMICG00000043748	-	94	59.043	Microcebus_murinus
ENSLAFG00000020906	-	92	55.676	ENSMICG00000047191	-	99	55.676	Microcebus_murinus
ENSLAFG00000020906	-	93	43.333	ENSMPUG00000013235	-	97	42.925	Mustela_putorius_furo
ENSLAFG00000020906	-	82	50.311	ENSMLUG00000000517	-	100	50.311	Myotis_lucifugus
ENSLAFG00000020906	-	86	53.571	ENSMLUG00000026771	-	80	51.701	Myotis_lucifugus
ENSLAFG00000020906	-	83	46.753	ENSMLUG00000028652	-	87	45.181	Myotis_lucifugus
ENSLAFG00000020906	-	94	56.296	ENSMLUG00000008631	-	99	56.296	Myotis_lucifugus
ENSLAFG00000020906	-	92	45.405	ENSMLUG00000024957	-	85	45.405	Myotis_lucifugus
ENSLAFG00000020906	-	53	47.748	ENSMLUG00000022226	-	82	47.748	Myotis_lucifugus
ENSLAFG00000020906	-	94	42.529	ENSMLUG00000024853	-	100	42.458	Myotis_lucifugus
ENSLAFG00000020906	-	95	43.455	ENSMLUG00000000977	-	99	43.299	Myotis_lucifugus
ENSLAFG00000020906	-	86	49.390	ENSMLUG00000023022	-	93	49.390	Myotis_lucifugus
ENSLAFG00000020906	-	82	50.588	ENSMLUG00000014565	-	100	50.588	Myotis_lucifugus
ENSLAFG00000020906	-	93	37.173	ENSNLEG00000018922	-	99	37.173	Nomascus_leucogenys
ENSLAFG00000020906	-	92	51.667	ENSOPRG00000002326	-	98	51.667	Ochotona_princeps
ENSLAFG00000020906	-	84	51.429	ENSOCUG00000023532	-	68	51.429	Oryctolagus_cuniculus
ENSLAFG00000020906	-	90	55.729	ENSOGAG00000024822	-	94	55.729	Otolemur_garnettii
ENSLAFG00000020906	-	94	60.963	ENSOGAG00000032518	-	97	60.963	Otolemur_garnettii
ENSLAFG00000020906	-	88	44.681	ENSOARG00000016213	APOBEC3Z1	98	44.681	Ovis_aries
ENSLAFG00000020906	-	94	46.429	ENSPPAG00000033277	-	77	45.641	Pan_paniscus
ENSLAFG00000020906	-	95	49.444	ENSPTRG00000014387	APOBEC3G	96	45.876	Pan_troglodytes
ENSLAFG00000020906	-	96	39.541	ENSPPYG00000011833	APOBEC3G	97	38.875	Pongo_abelii
ENSLAFG00000020906	-	61	68.800	ENSPCAG00000001848	-	91	68.800	Procavia_capensis
ENSLAFG00000020906	-	94	50.765	ENSPCAG00000015518	-	67	50.610	Procavia_capensis
ENSLAFG00000020906	-	90	56.000	ENSPCOG00000016357	-	92	56.000	Propithecus_coquereli
ENSLAFG00000020906	-	89	51.872	ENSPVAG00000004045	-	93	52.151	Pteropus_vampyrus
ENSLAFG00000020906	-	98	47.150	ENSRBIG00000035436	APOBEC3G	92	46.875	Rhinopithecus_bieti
ENSLAFG00000020906	-	92	56.684	ENSSBOG00000029091	-	91	56.684	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	97	45.833	ENSSBOG00000026566	-	97	44.500	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	97	42.133	ENSSBOG00000023468	-	78	42.133	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	97	40.217	ENSSBOG00000025673	-	99	39.062	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	94	43.045	ENSSBOG00000021384	-	97	43.045	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	97	45.860	ENSSBOG00000018208	-	99	45.860	Saimiri_boliviensis_boliviensis
ENSLAFG00000020906	-	86	49.714	ENSTTRG00000009395	-	88	49.714	Tursiops_truncatus
ENSLAFG00000020906	-	90	47.619	ENSUMAG00000002249	-	89	47.619	Ursus_maritimus
ENSLAFG00000020906	-	89	46.597	ENSUMAG00000014447	-	94	46.597	Ursus_maritimus