EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000021377 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 9217 bases
Position: chrscaffold_16:44535364-44544580
Accession: 100669756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017949	SAP	PF02037.27	2.5e-10	1	1
ENSLAFP00000019046	SAP	PF02037.27	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000021981	HNRNPU-201	2385	-	ENSLAFP00000017949	794 (aa)	-	G3TQU2
ENSLAFT00000034393	HNRNPU-202	2472	-	ENSLAFP00000019046	824 (aa)	XP_003410968	G3TTY8

Gene Model

Click here to download ENSLAFG00000021377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000021377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000021377	HNRNPU	76	44.337	ENSLAFG00000005377	-	92	43.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000021377	HNRNPU	100	97.939	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSLAFG00000021377	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	88	77.083	Acanthochromis_polyacanthus
ENSLAFG00000021377	HNRNPU	100	93.826	ENSAMEG00000009145	HNRNPU	100	94.431	Ailuropoda_melanoleuca
ENSLAFG00000021377	HNRNPU	99	50.719	ENSACIG00000012138	hnrnpub	88	80.952	Amphilophus_citrinellus
ENSLAFG00000021377	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	96	57.121	Amphiprion_ocellaris
ENSLAFG00000021377	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	96	57.121	Amphiprion_percula
ENSLAFG00000021377	HNRNPU	74	72.549	ENSATEG00000016178	hnrnpub	92	53.497	Anabas_testudineus
ENSLAFG00000021377	HNRNPU	81	83.458	ENSACAG00000004511	HNRNPU	100	74.854	Anolis_carolinensis
ENSLAFG00000021377	HNRNPU	100	97.736	ENSANAG00000033895	-	100	97.736	Aotus_nancymaae
ENSLAFG00000021377	HNRNPU	81	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSLAFG00000021377	HNRNPU	100	97.939	ENSBTAG00000007606	HNRNPU	100	97.939	Bos_taurus
ENSLAFG00000021377	HNRNPU	100	97.576	ENSCJAG00000016914	HNRNPU	100	97.576	Callithrix_jacchus
ENSLAFG00000021377	HNRNPU	100	96.898	ENSCAFG00020000918	HNRNPU	100	96.898	Canis_lupus_dingo
ENSLAFG00000021377	HNRNPU	100	96.898	ENSCHIG00000004900	HNRNPU	100	96.898	Capra_hircus
ENSLAFG00000021377	HNRNPU	100	97.212	ENSCPOG00000011887	HNRNPU	100	97.212	Cavia_porcellus
ENSLAFG00000021377	HNRNPU	100	97.576	ENSCCAG00000037859	-	100	97.576	Cebus_capucinus
ENSLAFG00000021377	HNRNPU	100	97.697	ENSCATG00000035273	HNRNPU	100	97.697	Cercocebus_atys
ENSLAFG00000021377	HNRNPU	100	97.455	ENSCLAG00000007100	HNRNPU	100	97.455	Chinchilla_lanigera
ENSLAFG00000021377	HNRNPU	100	96.402	ENSCSAG00000009219	HNRNPU	100	96.402	Chlorocebus_sabaeus
ENSLAFG00000021377	HNRNPU	82	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSLAFG00000021377	HNRNPU	100	79.905	ENSCPBG00000009415	HNRNPU	98	81.320	Chrysemys_picta_bellii
ENSLAFG00000021377	HNRNPU	100	94.354	ENSCANG00000022780	HNRNPU	100	95.107	Colobus_angolensis_palliatus
ENSLAFG00000021377	HNRNPU	100	94.881	ENSCGRG00001020525	Hnrnpu	100	95.506	Cricetulus_griseus_chok1gshd
ENSLAFG00000021377	HNRNPU	80	67.213	ENSCSEG00000010804	hnrnpub	96	60.924	Cynoglossus_semilaevis
ENSLAFG00000021377	HNRNPU	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSLAFG00000021377	HNRNPU	80	85.714	ENSDARG00000004735	hnrnpub	96	59.146	Danio_rerio
ENSLAFG00000021377	HNRNPU	81	62.319	ENSDARG00000015206	hnrnpua	97	59.164	Danio_rerio
ENSLAFG00000021377	HNRNPU	81	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSLAFG00000021377	HNRNPU	100	90.909	ENSDORG00000015491	Hnrnpu	100	91.407	Dipodomys_ordii
ENSLAFG00000021377	HNRNPU	100	93.168	ENSETEG00000014565	HNRNPU	100	93.292	Echinops_telfairi
ENSLAFG00000021377	HNRNPU	100	96.402	ENSEASG00005003017	HNRNPU	100	96.402	Equus_asinus_asinus
ENSLAFG00000021377	HNRNPU	100	96.278	ENSECAG00000007955	HNRNPU	100	96.278	Equus_caballus
ENSLAFG00000021377	HNRNPU	99	50.617	ENSELUG00000011966	hnrnpua	88	65.079	Esox_lucius
ENSLAFG00000021377	HNRNPU	77	56.638	ENSELUG00000010733	hnrnpub	97	55.203	Esox_lucius
ENSLAFG00000021377	HNRNPU	100	96.894	ENSFCAG00000002156	HNRNPU	99	96.894	Felis_catus
ENSLAFG00000021377	HNRNPU	90	98.653	ENSFDAG00000006026	HNRNPU	100	98.653	Fukomys_damarensis
ENSLAFG00000021377	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSLAFG00000021377	HNRNPU	75	58.466	ENSGMOG00000001755	hnrnpub	99	53.978	Gadus_morhua
ENSLAFG00000021377	HNRNPU	100	78.985	ENSGALG00000010671	HNRNPU	100	78.420	Gallus_gallus
ENSLAFG00000021377	HNRNPU	62	78.261	ENSGAFG00000009369	hnrnpub	99	49.942	Gambusia_affinis
ENSLAFG00000021377	HNRNPU	78	59.225	ENSGACG00000004679	hnrnpub	99	50.643	Gasterosteus_aculeatus
ENSLAFG00000021377	HNRNPU	100	97.455	ENSGGOG00000004061	HNRNPU	100	97.455	Gorilla_gorilla
ENSLAFG00000021377	HNRNPU	81	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSLAFG00000021377	HNRNPU	100	95.537	ENSHGLG00000010594	-	100	96.389	Heterocephalus_glaber_female
ENSLAFG00000021377	HNRNPU	90	98.992	ENSHGLG00100015093	HNRNPU	100	98.992	Heterocephalus_glaber_male
ENSLAFG00000021377	HNRNPU	80	83.333	ENSHCOG00000020091	hnrnpub	84	79.545	Hippocampus_comes
ENSLAFG00000021377	HNRNPU	78	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSLAFG00000021377	HNRNPU	100	95.647	ENSJJAG00000011371	Hnrnpu	100	95.647	Jaculus_jaculus
ENSLAFG00000021377	HNRNPU	81	63.077	ENSKMAG00000004532	hnrnpub	95	55.105	Kryptolebias_marmoratus
ENSLAFG00000021377	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	99	52.074	Labrus_bergylta
ENSLAFG00000021377	HNRNPU	99	62.593	ENSLACG00000017463	HNRNPU	99	62.438	Latimeria_chalumnae
ENSLAFG00000021377	HNRNPU	79	80.435	ENSLOCG00000016652	hnrnpua	99	58.907	Lepisosteus_oculatus
ENSLAFG00000021377	HNRNPU	100	97.697	ENSMFAG00000037308	HNRNPU	100	97.697	Macaca_fascicularis
ENSLAFG00000021377	HNRNPU	100	97.121	ENSMMUG00000021098	HNRNPU	100	97.121	Macaca_mulatta
ENSLAFG00000021377	HNRNPU	100	97.697	ENSMNEG00000043645	HNRNPU	100	97.697	Macaca_nemestrina
ENSLAFG00000021377	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	87	73.077	Mastacembelus_armatus
ENSLAFG00000021377	HNRNPU	81	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSLAFG00000021377	HNRNPU	100	95.630	ENSMAUG00000008842	Hnrnpu	100	95.630	Mesocricetus_auratus
ENSLAFG00000021377	HNRNPU	100	98.422	ENSMICG00000004616	HNRNPU	100	98.422	Microcebus_murinus
ENSLAFG00000021377	HNRNPU	100	95.630	ENSMOCG00000015623	Hnrnpu	100	95.630	Microtus_ochrogaster
ENSLAFG00000021377	HNRNPU	100	90.706	ENSMODG00000006515	HNRNPU	100	92.588	Monodelphis_domestica
ENSLAFG00000021377	HNRNPU	76	70.588	ENSMALG00000018243	hnrnpub	91	54.710	Monopterus_albus
ENSLAFG00000021377	HNRNPU	100	96.005	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.005	Mus_caroli
ENSLAFG00000021377	HNRNPU	100	95.885	ENSMUSG00000039630	Hnrnpu	100	95.885	Mus_musculus
ENSLAFG00000021377	HNRNPU	100	93.773	MGP_PahariEiJ_G0028193	Hnrnpu	100	94.770	Mus_pahari
ENSLAFG00000021377	HNRNPU	100	95.885	MGP_SPRETEiJ_G0015761	Hnrnpu	100	95.885	Mus_spretus
ENSLAFG00000021377	HNRNPU	100	87.485	ENSMLUG00000000475	HNRNPU	100	88.228	Myotis_lucifugus
ENSLAFG00000021377	HNRNPU	100	94.132	ENSNGAG00000019075	Hnrnpu	100	95.506	Nannospalax_galili
ENSLAFG00000021377	HNRNPU	81	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSLAFG00000021377	HNRNPU	99	88.043	ENSMEUG00000000541	HNRNPU	100	89.976	Notamacropus_eugenii
ENSLAFG00000021377	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSLAFG00000021377	HNRNPU	81	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSLAFG00000021377	HNRNPU	98	97.772	ENSOCUG00000014469	HNRNPU	93	97.772	Oryctolagus_cuniculus
ENSLAFG00000021377	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	87	83.333	Oryzias_latipes_hni
ENSLAFG00000021377	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	87	83.333	Oryzias_latipes_hsok
ENSLAFG00000021377	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	96	54.142	Oryzias_melastigma
ENSLAFG00000021377	HNRNPU	100	97.019	ENSOGAG00000014024	HNRNPU	100	97.019	Otolemur_garnettii
ENSLAFG00000021377	HNRNPU	83	100.000	ENSOARG00000004985	HNRNPU	92	98.658	Ovis_aries
ENSLAFG00000021377	HNRNPU	100	97.939	ENSPPAG00000038652	HNRNPU	100	97.939	Pan_paniscus
ENSLAFG00000021377	HNRNPU	100	97.939	ENSPPRG00000002662	HNRNPU	100	97.939	Panthera_pardus
ENSLAFG00000021377	HNRNPU	100	97.939	ENSPTRG00000002182	HNRNPU	100	97.939	Pan_troglodytes
ENSLAFG00000021377	HNRNPU	100	97.365	ENSPANG00000011643	HNRNPU	100	97.365	Papio_anubis
ENSLAFG00000021377	HNRNPU	99	58.424	ENSPKIG00000022332	hnrnpub	85	71.698	Paramormyrops_kingsleyae
ENSLAFG00000021377	HNRNPU	78	80.851	ENSPKIG00000006885	hnrnpua	84	80.851	Paramormyrops_kingsleyae
ENSLAFG00000021377	HNRNPU	100	94.869	ENSPCIG00000008657	HNRNPU	100	94.869	Phascolarctos_cinereus
ENSLAFG00000021377	HNRNPU	64	64.606	ENSPFOG00000002908	hnrnpub	99	50.173	Poecilia_formosa
ENSLAFG00000021377	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	99	50.290	Poecilia_latipinna
ENSLAFG00000021377	HNRNPU	100	92.174	ENSPCOG00000003883	-	100	91.801	Propithecus_coquereli
ENSLAFG00000021377	HNRNPU	100	98.301	ENSPCOG00000018655	-	100	98.301	Propithecus_coquereli
ENSLAFG00000021377	HNRNPU	100	97.939	ENSPVAG00000002581	HNRNPU	100	97.939	Pteropus_vampyrus
ENSLAFG00000021377	HNRNPU	81	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSLAFG00000021377	HNRNPU	78	80.851	ENSPNAG00000001055	hnrnpub	93	64.196	Pygocentrus_nattereri
ENSLAFG00000021377	HNRNPU	100	95.630	ENSRNOG00000033790	Hnrnpu	100	95.630	Rattus_norvegicus
ENSLAFG00000021377	HNRNPU	100	96.245	ENSRBIG00000031519	HNRNPU	100	96.245	Rhinopithecus_bieti
ENSLAFG00000021377	HNRNPU	100	96.389	ENSRROG00000041642	HNRNPU	100	96.389	Rhinopithecus_roxellana
ENSLAFG00000021377	HNRNPU	99	59.600	ENSSFOG00015001124	hnrnpub	99	57.625	Scleropages_formosus
ENSLAFG00000021377	HNRNPU	94	59.764	ENSSFOG00015019004	hnrnpu	98	59.572	Scleropages_formosus
ENSLAFG00000021377	HNRNPU	70	61.228	ENSSMAG00000003607	hnrnpub	94	57.822	Scophthalmus_maximus
ENSLAFG00000021377	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSLAFG00000021377	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	99	51.412	Seriola_lalandi_dorsalis
ENSLAFG00000021377	HNRNPU	100	79.904	ENSSPUG00000011393	HNRNPU	100	79.783	Sphenodon_punctatus
ENSLAFG00000021377	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	87	78.261	Stegastes_partitus
ENSLAFG00000021377	HNRNPU	100	97.939	ENSSSCG00000010877	HNRNPU	100	97.939	Sus_scrofa
ENSLAFG00000021377	HNRNPU	79	66.667	ENSTRUG00000007759	hnrnpub	86	64.706	Takifugu_rubripes
ENSLAFG00000021377	HNRNPU	81	68.085	ENSTNIG00000009725	hnrnpub	91	68.085	Tetraodon_nigroviridis
ENSLAFG00000021377	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSLAFG00000021377	HNRNPU	100	98.182	ENSUAMG00000021120	HNRNPU	100	98.182	Ursus_americanus
ENSLAFG00000021377	HNRNPU	99	84.906	ENSUMAG00000012322	HNRNPU	98	94.595	Ursus_maritimus
ENSLAFG00000021377	HNRNPU	78	96.396	ENSVPAG00000010520	HNRNPU	91	96.396	Vicugna_pacos
ENSLAFG00000021377	HNRNPU	100	96.898	ENSVVUG00000026524	HNRNPU	100	96.898	Vulpes_vulpes
ENSLAFG00000021377	HNRNPU	99	66.143	ENSXETG00000011386	hnrnpu	99	68.949	Xenopus_tropicalis
ENSLAFG00000021377	HNRNPU	79	78.261	ENSXMAG00000010356	hnrnpub	99	50.058	Xiphophorus_maculatus