EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000021535 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 43204 bases
Position: chrscaffold_0:8675667-8718870
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000016480	RNase_Zc3h12a	PF11977.8	2e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000022043	-	960	-	ENSLAFP00000016480	320 (aa)	-	G3TMU8

Gene Model

Click here to download ENSLAFG00000021535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000021535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000021535	-	67	65.421	ENSLAFG00000016296	ZC3H12C	68	55.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000021535	-	100	80.685	ENSG00000178199	ZC3H12D	98	93.269	Homo_sapiens
ENSLAFG00000021535	-	83	85.019	ENSAMEG00000018283	-	100	85.019	Ailuropoda_melanoleuca
ENSLAFG00000021535	-	96	67.638	ENSAPLG00000008379	ZC3H12D	93	67.638	Anas_platyrhynchos
ENSLAFG00000021535	-	96	64.286	ENSACAG00000006984	ZC3H12D	94	64.725	Anolis_carolinensis
ENSLAFG00000021535	-	97	82.637	ENSANAG00000020234	ZC3H12D	58	82.637	Aotus_nancymaae
ENSLAFG00000021535	-	99	85.266	ENSBTAG00000007388	ZC3H12D	60	85.266	Bos_taurus
ENSLAFG00000021535	-	97	81.994	ENSCJAG00000019606	ZC3H12D	89	75.658	Callithrix_jacchus
ENSLAFG00000021535	-	84	86.567	ENSCAFG00000000375	ZC3H12D	54	86.567	Canis_familiaris
ENSLAFG00000021535	-	73	84.979	ENSCAFG00020013539	-	77	84.979	Canis_lupus_dingo
ENSLAFG00000021535	-	97	86.495	ENSCHIG00000025964	ZC3H12D	60	84.953	Capra_hircus
ENSLAFG00000021535	-	53	68.235	ENSTSYG00000034158	-	100	68.235	Carlito_syrichta
ENSLAFG00000021535	-	94	77.076	ENSCAPG00000014473	ZC3H12D	66	76.744	Cavia_aperea
ENSLAFG00000021535	-	94	85.050	ENSCPOG00000014608	ZC3H12D	65	85.050	Cavia_porcellus
ENSLAFG00000021535	-	93	83.893	ENSCCAG00000013595	ZC3H12D	87	75.658	Cebus_capucinus
ENSLAFG00000021535	-	97	81.935	ENSCATG00000038224	ZC3H12D	89	75.000	Cercocebus_atys
ENSLAFG00000021535	-	94	83.389	ENSCLAG00000002831	ZC3H12D	66	83.389	Chinchilla_lanigera
ENSLAFG00000021535	-	93	82.943	ENSCSAG00000017217	ZC3H12D	61	79.692	Chlorocebus_sabaeus
ENSLAFG00000021535	-	97	81.613	ENSCANG00000028774	ZC3H12D	89	75.000	Colobus_angolensis_palliatus
ENSLAFG00000021535	-	97	81.029	ENSCGRG00001019159	Zc3h12d	58	81.029	Cricetulus_griseus_chok1gshd
ENSLAFG00000021535	-	97	81.029	ENSCGRG00000006178	Zc3h12d	58	81.029	Cricetulus_griseus_crigri
ENSLAFG00000021535	-	93	81.419	ENSDORG00000027483	-	94	81.419	Dipodomys_ordii
ENSLAFG00000021535	-	61	69.072	ENSETEG00000016119	-	91	69.072	Echinops_telfairi
ENSLAFG00000021535	-	99	85.535	ENSEASG00005008940	ZC3H12D	79	83.262	Equus_asinus_asinus
ENSLAFG00000021535	-	99	85.849	ENSECAG00000017135	ZC3H12D	58	85.849	Equus_caballus
ENSLAFG00000021535	-	97	85.161	ENSFCAG00000011290	ZC3H12D	92	77.632	Felis_catus
ENSLAFG00000021535	-	97	67.638	ENSFALG00000013127	ZC3H12D	97	67.742	Ficedula_albicollis
ENSLAFG00000021535	-	90	83.391	ENSFDAG00000000874	ZC3H12D	74	83.391	Fukomys_damarensis
ENSLAFG00000021535	-	100	80.997	ENSGGOG00000005511	ZC3H12D	89	75.658	Gorilla_gorilla
ENSLAFG00000021535	-	99	82.609	ENSSTOG00000013975	ZC3H12D	62	82.609	Ictidomys_tridecemlineatus
ENSLAFG00000021535	-	93	63.851	ENSLACG00000016816	ZC3H12D	93	63.851	Latimeria_chalumnae
ENSLAFG00000021535	-	97	81.613	ENSMFAG00000034693	ZC3H12D	89	74.342	Macaca_fascicularis
ENSLAFG00000021535	-	100	80.435	ENSMNEG00000004043	ZC3H12D	89	74.342	Macaca_nemestrina
ENSLAFG00000021535	-	93	67.003	ENSMGAG00000012594	ZC3H12D	92	66.667	Meleagris_gallopavo
ENSLAFG00000021535	-	100	81.538	ENSMICG00000044838	ZC3H12D	88	78.947	Microcebus_murinus
ENSLAFG00000021535	-	97	80.707	ENSMOCG00000015590	Zc3h12d	58	80.707	Microtus_ochrogaster
ENSLAFG00000021535	-	95	75.490	ENSMODG00000016829	-	96	75.490	Monodelphis_domestica
ENSLAFG00000021535	-	97	81.350	MGP_CAROLIEiJ_G0015104	Zc3h12d	58	81.350	Mus_caroli
ENSLAFG00000021535	-	98	81.587	ENSMUSG00000039981	Zc3h12d	59	81.587	Mus_musculus
ENSLAFG00000021535	-	97	81.029	MGP_PahariEiJ_G0023723	Zc3h12d	58	81.029	Mus_pahari
ENSLAFG00000021535	-	97	81.994	MGP_SPRETEiJ_G0015911	Zc3h12d	58	81.994	Mus_spretus
ENSLAFG00000021535	-	86	83.942	ENSMPUG00000018072	-	99	83.942	Mustela_putorius_furo
ENSLAFG00000021535	-	97	84.566	ENSMLUG00000029238	ZC3H12D	99	84.566	Myotis_lucifugus
ENSLAFG00000021535	-	99	67.391	ENSNGAG00000010502	Zc3h12d	67	67.391	Nannospalax_galili
ENSLAFG00000021535	-	97	72.669	ENSNLEG00000015313	-	89	75.000	Nomascus_leucogenys
ENSLAFG00000021535	-	88	77.305	ENSMEUG00000004686	-	99	77.305	Notamacropus_eugenii
ENSLAFG00000021535	-	94	82.781	ENSOPRG00000014034	ZC3H12D	64	82.085	Ochotona_princeps
ENSLAFG00000021535	-	94	84.718	ENSODEG00000002553	ZC3H12D	65	84.718	Octodon_degus
ENSLAFG00000021535	-	51	79.755	ENSOANG00000020837	-	100	79.755	Ornithorhynchus_anatinus
ENSLAFG00000021535	-	83	85.393	ENSOCUG00000007690	-	85	85.393	Oryctolagus_cuniculus
ENSLAFG00000021535	-	97	82.581	ENSOGAG00000031025	ZC3H12D	59	82.581	Otolemur_garnettii
ENSLAFG00000021535	-	91	84.247	ENSOARG00000002626	ZC3H12D	66	84.247	Ovis_aries
ENSLAFG00000021535	-	100	80.685	ENSPPAG00000041304	ZC3H12D	89	75.658	Pan_paniscus
ENSLAFG00000021535	-	96	85.390	ENSPPRG00000004536	ZC3H12D	92	76.974	Panthera_pardus
ENSLAFG00000021535	-	100	80.374	ENSPTRG00000050357	ZC3H12D	89	75.000	Pan_troglodytes
ENSLAFG00000021535	-	97	82.258	ENSPANG00000034987	ZC3H12D	89	75.658	Papio_anubis
ENSLAFG00000021535	-	93	68.000	ENSPSIG00000016475	ZC3H12D	97	68.000	Pelodiscus_sinensis
ENSLAFG00000021535	-	94	81.728	ENSPEMG00000010962	Zc3h12d	56	81.728	Peromyscus_maniculatus_bairdii
ENSLAFG00000021535	-	100	80.997	ENSPPYG00000017087	ZC3H12D	61	80.997	Pongo_abelii
ENSLAFG00000021535	-	84	89.179	ENSPCAG00000002991	ZC3H12D	51	89.179	Procavia_capensis
ENSLAFG00000021535	-	100	80.938	ENSPCOG00000017645	ZC3H12D	88	76.316	Propithecus_coquereli
ENSLAFG00000021535	-	97	82.958	ENSRNOG00000016041	Zc3h12d	58	82.958	Rattus_norvegicus
ENSLAFG00000021535	-	97	80.968	ENSRBIG00000012478	ZC3H12D	89	74.342	Rhinopithecus_bieti
ENSLAFG00000021535	-	97	80.968	ENSRROG00000038053	ZC3H12D	89	74.342	Rhinopithecus_roxellana
ENSLAFG00000021535	-	97	81.994	ENSSBOG00000023337	ZC3H12D	89	75.000	Saimiri_boliviensis_boliviensis
ENSLAFG00000021535	-	95	76.797	ENSSHAG00000017000	ZC3H12D	60	75.235	Sarcophilus_harrisii
ENSLAFG00000021535	-	99	82.445	ENSSSCG00000004109	ZC3H12D	62	82.445	Sus_scrofa
ENSLAFG00000021535	-	96	66.883	ENSTGUG00000010664	ZC3H12D	97	66.883	Taeniopygia_guttata
ENSLAFG00000021535	-	97	80.323	ENSTBEG00000000892	-	100	80.323	Tupaia_belangeri
ENSLAFG00000021535	-	75	75.934	ENSUMAG00000002782	-	68	75.934	Ursus_maritimus
ENSLAFG00000021535	-	51	75.926	ENSVVUG00000005116	-	99	75.926	Vulpes_vulpes