EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000021872 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 1807 bases
Position: chrscaffold_118:1892451-1894257
Accession: 100661299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017753	Exo_endo_phos	PF03372.23	6.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000022465	APEX1-201	957	-	ENSLAFP00000017753	318 (aa)	XP_003421623	G3TQD8

Gene Model

Click here to download ENSLAFG00000021872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000021872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000021872	APEX1	100	94.025	ENSG00000100823	APEX1	100	94.025	Homo_sapiens
ENSLAFG00000021872	APEX1	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSLAFG00000021872	APEX1	100	94.654	ENSAMEG00000005418	APEX1	100	94.654	Ailuropoda_melanoleuca
ENSLAFG00000021872	APEX1	87	71.583	ENSACIG00000010653	apex1	94	71.685	Amphilophus_citrinellus
ENSLAFG00000021872	APEX1	88	69.892	ENSAOCG00000009649	apex1	90	69.892	Amphiprion_ocellaris
ENSLAFG00000021872	APEX1	88	69.892	ENSAPEG00000021453	apex1	90	69.892	Amphiprion_percula
ENSLAFG00000021872	APEX1	86	72.263	ENSATEG00000002883	apex1	97	66.984	Anabas_testudineus
ENSLAFG00000021872	APEX1	100	67.913	ENSACAG00000008099	APEX1	100	69.688	Anolis_carolinensis
ENSLAFG00000021872	APEX1	100	94.340	ENSANAG00000030117	APEX1	100	94.340	Aotus_nancymaae
ENSLAFG00000021872	APEX1	86	72.000	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSLAFG00000021872	APEX1	100	65.094	ENSAMXG00000034699	apex1	89	70.251	Astyanax_mexicanus
ENSLAFG00000021872	APEX1	100	92.453	ENSBTAG00000002745	APEX1	100	92.453	Bos_taurus
ENSLAFG00000021872	APEX1	80	44.141	WBGene00001372	exo-3	88	44.141	Caenorhabditis_elegans
ENSLAFG00000021872	APEX1	100	94.969	ENSCJAG00000009726	APEX1	100	94.969	Callithrix_jacchus
ENSLAFG00000021872	APEX1	100	93.396	ENSCAFG00000032033	APEX1	100	93.396	Canis_familiaris
ENSLAFG00000021872	APEX1	100	93.396	ENSCAFG00020014377	-	100	93.396	Canis_lupus_dingo
ENSLAFG00000021872	APEX1	54	89.535	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSLAFG00000021872	APEX1	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSLAFG00000021872	APEX1	100	91.824	ENSCHIG00000007298	-	100	91.824	Capra_hircus
ENSLAFG00000021872	APEX1	100	92.767	ENSTSYG00000034813	APEX1	100	92.767	Carlito_syrichta
ENSLAFG00000021872	APEX1	85	86.347	ENSCAPG00000016235	APEX1	91	94.915	Cavia_aperea
ENSLAFG00000021872	APEX1	100	93.082	ENSCPOG00000030909	APEX1	100	93.082	Cavia_porcellus
ENSLAFG00000021872	APEX1	100	94.969	ENSCCAG00000033056	-	100	94.969	Cebus_capucinus
ENSLAFG00000021872	APEX1	100	82.704	ENSCCAG00000031931	-	100	82.704	Cebus_capucinus
ENSLAFG00000021872	APEX1	100	94.025	ENSCATG00000015580	APEX1	100	94.025	Cercocebus_atys
ENSLAFG00000021872	APEX1	100	93.082	ENSCLAG00000001002	APEX1	100	93.082	Chinchilla_lanigera
ENSLAFG00000021872	APEX1	100	94.025	ENSCSAG00000016670	-	100	94.025	Chlorocebus_sabaeus
ENSLAFG00000021872	APEX1	100	94.025	ENSCSAG00000016685	-	100	94.025	Chlorocebus_sabaeus
ENSLAFG00000021872	APEX1	100	69.906	ENSCPBG00000009567	APEX1	100	69.906	Chrysemys_picta_bellii
ENSLAFG00000021872	APEX1	93	54.455	ENSCING00000008137	-	84	59.245	Ciona_intestinalis
ENSLAFG00000021872	APEX1	84	52.612	ENSCSAVG00000007144	-	100	53.668	Ciona_savignyi
ENSLAFG00000021872	APEX1	100	94.025	ENSCANG00000030726	APEX1	100	94.025	Colobus_angolensis_palliatus
ENSLAFG00000021872	APEX1	100	89.937	ENSCGRG00001017046	Apex1	100	89.937	Cricetulus_griseus_chok1gshd
ENSLAFG00000021872	APEX1	100	89.937	ENSCGRG00000008984	Apex1	100	89.937	Cricetulus_griseus_crigri
ENSLAFG00000021872	APEX1	99	63.291	ENSCSEG00000017499	apex1	89	68.459	Cynoglossus_semilaevis
ENSLAFG00000021872	APEX1	88	72.401	ENSCVAG00000022075	apex1	99	67.405	Cyprinodon_variegatus
ENSLAFG00000021872	APEX1	100	66.981	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSLAFG00000021872	APEX1	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSLAFG00000021872	APEX1	100	92.453	ENSDORG00000001616	Apex1	100	92.453	Dipodomys_ordii
ENSLAFG00000021872	APEX1	100	94.025	ENSETEG00000004855	-	100	94.025	Echinops_telfairi
ENSLAFG00000021872	APEX1	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSLAFG00000021872	APEX1	100	94.654	ENSEASG00005017489	APEX1	74	94.654	Equus_asinus_asinus
ENSLAFG00000021872	APEX1	100	94.654	ENSECAG00000022325	APEX1	82	94.654	Equus_caballus
ENSLAFG00000021872	APEX1	87	93.478	ENSEEUG00000012569	APEX1	96	93.478	Erinaceus_europaeus
ENSLAFG00000021872	APEX1	100	65.723	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSLAFG00000021872	APEX1	100	94.654	ENSFCAG00000030869	APEX1	100	94.654	Felis_catus
ENSLAFG00000021872	APEX1	100	92.138	ENSFDAG00000006120	APEX1	100	92.138	Fukomys_damarensis
ENSLAFG00000021872	APEX1	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSLAFG00000021872	APEX1	99	62.658	ENSGMOG00000007943	apex1	99	62.342	Gadus_morhua
ENSLAFG00000021872	APEX1	88	72.760	ENSGAFG00000005311	apex1	99	67.722	Gambusia_affinis
ENSLAFG00000021872	APEX1	99	65.506	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSLAFG00000021872	APEX1	100	69.592	ENSGAGG00000014999	APEX1	100	69.592	Gopherus_agassizii
ENSLAFG00000021872	APEX1	100	94.340	ENSGGOG00000002128	APEX1	100	94.340	Gorilla_gorilla
ENSLAFG00000021872	APEX1	86	71.636	ENSHBUG00000005894	apex1	90	71.326	Haplochromis_burtoni
ENSLAFG00000021872	APEX1	100	93.082	ENSHGLG00000002848	APEX1	100	93.082	Heterocephalus_glaber_female
ENSLAFG00000021872	APEX1	100	93.082	ENSHGLG00100017878	APEX1	100	93.082	Heterocephalus_glaber_male
ENSLAFG00000021872	APEX1	99	66.246	ENSHCOG00000009961	apex1	89	70.968	Hippocampus_comes
ENSLAFG00000021872	APEX1	100	66.144	ENSIPUG00000005799	apex1	100	65.831	Ictalurus_punctatus
ENSLAFG00000021872	APEX1	100	92.138	ENSSTOG00000010096	APEX1	100	92.138	Ictidomys_tridecemlineatus
ENSLAFG00000021872	APEX1	90	83.217	ENSJJAG00000020465	-	92	83.217	Jaculus_jaculus
ENSLAFG00000021872	APEX1	100	82.075	ENSJJAG00000003660	-	100	82.075	Jaculus_jaculus
ENSLAFG00000021872	APEX1	100	91.509	ENSJJAG00000012067	-	100	91.509	Jaculus_jaculus
ENSLAFG00000021872	APEX1	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSLAFG00000021872	APEX1	88	69.176	ENSLBEG00000010248	apex1	90	69.176	Labrus_bergylta
ENSLAFG00000021872	APEX1	100	66.562	ENSLACG00000008617	APEX1	100	64.780	Latimeria_chalumnae
ENSLAFG00000021872	APEX1	100	66.770	ENSLOCG00000015516	apex1	99	66.981	Lepisosteus_oculatus
ENSLAFG00000021872	APEX1	100	93.711	ENSMFAG00000002565	APEX1	100	93.711	Macaca_fascicularis
ENSLAFG00000021872	APEX1	100	93.711	ENSMMUG00000048039	APEX1	100	93.711	Macaca_mulatta
ENSLAFG00000021872	APEX1	100	93.711	ENSMNEG00000036944	APEX1	100	93.711	Macaca_nemestrina
ENSLAFG00000021872	APEX1	100	94.025	ENSMLEG00000042125	APEX1	100	94.025	Mandrillus_leucophaeus
ENSLAFG00000021872	APEX1	99	67.089	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSLAFG00000021872	APEX1	86	72.000	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSLAFG00000021872	APEX1	100	90.881	ENSMAUG00000013994	Apex1	100	90.881	Mesocricetus_auratus
ENSLAFG00000021872	APEX1	100	93.396	ENSMICG00000043554	APEX1	100	93.396	Microcebus_murinus
ENSLAFG00000021872	APEX1	100	91.195	ENSMOCG00000013721	Apex1	100	91.195	Microtus_ochrogaster
ENSLAFG00000021872	APEX1	88	68.214	ENSMMOG00000010031	apex1	87	68.214	Mola_mola
ENSLAFG00000021872	APEX1	100	84.062	ENSMODG00000007125	APEX1	100	84.375	Monodelphis_domestica
ENSLAFG00000021872	APEX1	88	64.516	ENSMALG00000011699	apex1	75	64.516	Monopterus_albus
ENSLAFG00000021872	APEX1	99	92.429	MGP_CAROLIEiJ_G0019209	Apex1	99	92.429	Mus_caroli
ENSLAFG00000021872	APEX1	100	92.453	ENSMUSG00000035960	Apex1	100	92.453	Mus_musculus
ENSLAFG00000021872	APEX1	100	92.453	MGP_PahariEiJ_G0030232	Apex1	100	92.453	Mus_pahari
ENSLAFG00000021872	APEX1	100	92.453	MGP_SPRETEiJ_G0020101	Apex1	100	92.453	Mus_spretus
ENSLAFG00000021872	APEX1	100	93.125	ENSMLUG00000028957	APEX1	100	93.125	Myotis_lucifugus
ENSLAFG00000021872	APEX1	97	69.805	ENSNGAG00000021748	-	95	69.805	Nannospalax_galili
ENSLAFG00000021872	APEX1	100	91.195	ENSNGAG00000002725	-	100	91.195	Nannospalax_galili
ENSLAFG00000021872	APEX1	86	72.364	ENSNBRG00000005334	apex1	91	67.089	Neolamprologus_brichardi
ENSLAFG00000021872	APEX1	100	94.025	ENSNLEG00000010839	APEX1	100	94.025	Nomascus_leucogenys
ENSLAFG00000021872	APEX1	100	85.535	ENSMEUG00000014519	APEX1	100	84.591	Notamacropus_eugenii
ENSLAFG00000021872	APEX1	100	92.138	ENSOPRG00000014029	APEX1	100	91.824	Ochotona_princeps
ENSLAFG00000021872	APEX1	97	74.110	ENSODEG00000004777	-	99	74.110	Octodon_degus
ENSLAFG00000021872	APEX1	100	93.396	ENSODEG00000001703	-	100	93.396	Octodon_degus
ENSLAFG00000021872	APEX1	100	70.679	ENSODEG00000006583	-	100	70.679	Octodon_degus
ENSLAFG00000021872	APEX1	87	71.942	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSLAFG00000021872	APEX1	90	83.860	ENSOANG00000008836	APEX1	80	77.064	Ornithorhynchus_anatinus
ENSLAFG00000021872	APEX1	100	93.396	ENSOCUG00000005022	APEX1	100	93.396	Oryctolagus_cuniculus
ENSLAFG00000021872	APEX1	99	67.089	ENSORLG00000012378	apex1	89	72.043	Oryzias_latipes
ENSLAFG00000021872	APEX1	99	67.089	ENSORLG00020021371	apex1	89	72.043	Oryzias_latipes_hni
ENSLAFG00000021872	APEX1	99	67.089	ENSORLG00015020089	apex1	89	72.043	Oryzias_latipes_hsok
ENSLAFG00000021872	APEX1	88	71.326	ENSOMEG00000018876	apex1	99	66.456	Oryzias_melastigma
ENSLAFG00000021872	APEX1	98	82.372	ENSOGAG00000029355	-	100	82.372	Otolemur_garnettii
ENSLAFG00000021872	APEX1	100	93.396	ENSOGAG00000013335	-	100	93.396	Otolemur_garnettii
ENSLAFG00000021872	APEX1	100	90.881	ENSOARG00000019740	-	100	90.881	Ovis_aries
ENSLAFG00000021872	APEX1	97	88.312	ENSOARG00000001876	-	100	88.312	Ovis_aries
ENSLAFG00000021872	APEX1	99	77.848	ENSOARG00000014424	-	100	77.848	Ovis_aries
ENSLAFG00000021872	APEX1	100	94.340	ENSPPAG00000038760	APEX1	100	94.340	Pan_paniscus
ENSLAFG00000021872	APEX1	100	94.969	ENSPPRG00000011794	APEX1	100	94.969	Panthera_pardus
ENSLAFG00000021872	APEX1	100	94.654	ENSPTIG00000014829	APEX1	100	94.654	Panthera_tigris_altaica
ENSLAFG00000021872	APEX1	100	94.340	ENSPTRG00000006093	APEX1	100	94.340	Pan_troglodytes
ENSLAFG00000021872	APEX1	100	94.025	ENSPANG00000022757	APEX1	100	94.025	Papio_anubis
ENSLAFG00000021872	APEX1	87	69.314	ENSPKIG00000003504	apex1	90	68.662	Paramormyrops_kingsleyae
ENSLAFG00000021872	APEX1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSLAFG00000021872	APEX1	100	92.453	ENSPEMG00000019097	Apex1	100	92.453	Peromyscus_maniculatus_bairdii
ENSLAFG00000021872	APEX1	94	66.667	ENSPMAG00000007275	-	95	69.395	Petromyzon_marinus
ENSLAFG00000021872	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	84.062	Phascolarctos_cinereus
ENSLAFG00000021872	APEX1	88	73.118	ENSPFOG00000004178	apex1	90	73.118	Poecilia_formosa
ENSLAFG00000021872	APEX1	88	72.760	ENSPLAG00000012779	apex1	90	72.760	Poecilia_latipinna
ENSLAFG00000021872	APEX1	88	73.118	ENSPMEG00000019623	apex1	90	73.118	Poecilia_mexicana
ENSLAFG00000021872	APEX1	88	72.760	ENSPREG00000014298	apex1	89	72.760	Poecilia_reticulata
ENSLAFG00000021872	APEX1	100	93.711	ENSPPYG00000005565	APEX1	100	93.711	Pongo_abelii
ENSLAFG00000021872	APEX1	100	93.082	ENSPCAG00000010376	APEX1	100	93.082	Procavia_capensis
ENSLAFG00000021872	APEX1	100	93.396	ENSPCOG00000021564	APEX1	100	93.396	Propithecus_coquereli
ENSLAFG00000021872	APEX1	100	94.062	ENSPVAG00000010736	APEX1	100	94.062	Pteropus_vampyrus
ENSLAFG00000021872	APEX1	86	72.000	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSLAFG00000021872	APEX1	93	64.407	ENSPNAG00000020897	apex1	85	69.804	Pygocentrus_nattereri
ENSLAFG00000021872	APEX1	100	91.509	ENSRNOG00000009663	Apex1	100	91.509	Rattus_norvegicus
ENSLAFG00000021872	APEX1	100	94.025	ENSRBIG00000038325	APEX1	99	94.025	Rhinopithecus_bieti
ENSLAFG00000021872	APEX1	100	80.818	ENSSBOG00000031372	-	100	80.635	Saimiri_boliviensis_boliviensis
ENSLAFG00000021872	APEX1	100	94.654	ENSSBOG00000018921	-	100	94.654	Saimiri_boliviensis_boliviensis
ENSLAFG00000021872	APEX1	100	83.333	ENSSHAG00000013524	APEX1	100	83.333	Sarcophilus_harrisii
ENSLAFG00000021872	APEX1	87	66.787	ENSSFOG00015001948	apex1	100	61.950	Scleropages_formosus
ENSLAFG00000021872	APEX1	87	69.784	ENSSMAG00000013348	apex1	99	65.931	Scophthalmus_maximus
ENSLAFG00000021872	APEX1	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSLAFG00000021872	APEX1	99	66.772	ENSSLDG00000023005	apex1	99	66.772	Seriola_lalandi_dorsalis
ENSLAFG00000021872	APEX1	89	73.592	ENSSPUG00000000531	APEX1	96	73.592	Sphenodon_punctatus
ENSLAFG00000021872	APEX1	88	71.326	ENSSPAG00000000458	apex1	99	66.139	Stegastes_partitus
ENSLAFG00000021872	APEX1	98	54.403	ENSSSCG00000039705	-	99	54.403	Sus_scrofa
ENSLAFG00000021872	APEX1	100	92.453	ENSSSCG00000040060	-	100	92.453	Sus_scrofa
ENSLAFG00000021872	APEX1	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSLAFG00000021872	APEX1	87	68.705	ENSTRUG00000004268	apex1	95	64.557	Takifugu_rubripes
ENSLAFG00000021872	APEX1	99	63.924	ENSTNIG00000005778	apex1	90	68.817	Tetraodon_nigroviridis
ENSLAFG00000021872	APEX1	100	89.937	ENSTBEG00000006405	APEX1	100	89.937	Tupaia_belangeri
ENSLAFG00000021872	APEX1	74	94.068	ENSTTRG00000007860	APEX1	100	94.068	Tursiops_truncatus
ENSLAFG00000021872	APEX1	100	94.340	ENSUAMG00000010457	APEX1	100	94.340	Ursus_americanus
ENSLAFG00000021872	APEX1	100	94.340	ENSUMAG00000009178	APEX1	100	94.340	Ursus_maritimus
ENSLAFG00000021872	APEX1	74	88.983	ENSVPAG00000005083	APEX1	100	88.983	Vicugna_pacos
ENSLAFG00000021872	APEX1	100	92.767	ENSVVUG00000009010	APEX1	100	92.767	Vulpes_vulpes
ENSLAFG00000021872	APEX1	100	65.635	ENSXETG00000024773	apex1	100	64.134	Xenopus_tropicalis
ENSLAFG00000021872	APEX1	88	72.760	ENSXCOG00000015233	apex1	89	72.760	Xiphophorus_couchianus
ENSLAFG00000021872	APEX1	94	70.470	ENSXMAG00000006195	apex1	90	72.760	Xiphophorus_maculatus