EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000022367 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 4692 bases
Position: chrscaffold_6:25101119-25105810
Accession: 100666345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017939	zf-C2H2	PF00096.26	3.1e-27	1	5
ENSLAFP00000017939	zf-C2H2	PF00096.26	3.1e-27	2	5
ENSLAFP00000017939	zf-C2H2	PF00096.26	3.1e-27	3	5
ENSLAFP00000017939	zf-C2H2	PF00096.26	3.1e-27	4	5
ENSLAFP00000017939	zf-C2H2	PF00096.26	3.1e-27	5	5
ENSLAFP00000024362	zf-C2H2	PF00096.26	2.4e-21	1	4
ENSLAFP00000024362	zf-C2H2	PF00096.26	2.4e-21	2	4
ENSLAFP00000024362	zf-C2H2	PF00096.26	2.4e-21	3	4
ENSLAFP00000024362	zf-C2H2	PF00096.26	2.4e-21	4	4
ENSLAFP00000024362	zf-met	PF12874.7	3.5e-06	1	1
ENSLAFP00000017939	zf-met	PF12874.7	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000026543	GFI1B-202	993	-	ENSLAFP00000024362	330 (aa)	-	G3U954
ENSLAFT00000021525	GFI1B-201	993	-	ENSLAFP00000017939	330 (aa)	XP_003407513	G3TQT5

Gene Model

Click here to download ENSLAFG00000022367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000022367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000022367	GFI1B	56	44.860	ENSLAFG00000000308	ZNF574	62	45.283
ENSLAFG00000022367	GFI1B	64	34.356	ENSLAFG00000007752	-	99	38.272
ENSLAFG00000022367	GFI1B	59	40.588	ENSLAFG00000002266	ZNF319	92	40.588
ENSLAFG00000022367	GFI1B	52	45.614	ENSLAFG00000006959	ZNF2	60	45.614
ENSLAFG00000022367	GFI1B	51	48.000	ENSLAFG00000030700	ZNF865	99	44.444
ENSLAFG00000022367	GFI1B	52	35.766	ENSLAFG00000005117	SNAI3	51	35.766
ENSLAFG00000022367	GFI1B	95	42.857	ENSLAFG00000014451	-	92	43.293
ENSLAFG00000022367	GFI1B	65	43.671	ENSLAFG00000002806	ZNF317	72	43.671
ENSLAFG00000022367	GFI1B	62	44.853	ENSLAFG00000003125	ZFP1	82	44.853
ENSLAFG00000022367	GFI1B	50	34.906	ENSLAFG00000009299	SNAI2	66	33.898
ENSLAFG00000022367	GFI1B	60	39.362	ENSLAFG00000022960	ZFP64	71	39.362
ENSLAFG00000022367	GFI1B	50	38.202	ENSLAFG00000008686	-	82	36.538
ENSLAFG00000022367	GFI1B	52	36.364	ENSLAFG00000032716	-	100	36.441
ENSLAFG00000022367	GFI1B	54	44.218	ENSLAFG00000011022	ZFP69B	64	44.218
ENSLAFG00000022367	GFI1B	54	39.130	ENSLAFG00000006532	PRDM5	97	38.889
ENSLAFG00000022367	GFI1B	51	37.037	ENSLAFG00000030265	SNAI1	97	37.037
ENSLAFG00000022367	GFI1B	93	44.512	ENSLAFG00000002909	-	94	44.512
ENSLAFG00000022367	GFI1B	71	38.095	ENSLAFG00000013445	ZNF521	98	32.544
ENSLAFG00000022367	GFI1B	55	45.399	ENSLAFG00000022529	ZNF628	100	45.399
ENSLAFG00000022367	GFI1B	75	41.250	ENSLAFG00000010205	ZFAT	99	38.824
ENSLAFG00000022367	GFI1B	86	47.706	ENSLAFG00000031653	-	98	49.505
ENSLAFG00000022367	GFI1B	58	45.070	ENSLAFG00000011186	ZNF235	77	45.070
ENSLAFG00000022367	GFI1B	62	31.844	ENSLAFG00000029320	ZNF784	81	31.844
ENSLAFG00000022367	GFI1B	58	42.529	ENSLAFG00000022290	ZNF668	91	42.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000022367	GFI1B	100	57.738	ENSAPOG00000001296	gfi1b	100	57.738	Acanthochromis_polyacanthus
ENSLAFG00000022367	GFI1B	99	55.556	ENSACIG00000002190	gfi1b	99	54.734	Amphilophus_citrinellus
ENSLAFG00000022367	GFI1B	100	58.258	ENSAOCG00000021187	gfi1b	100	58.258	Amphiprion_ocellaris
ENSLAFG00000022367	GFI1B	100	59.036	ENSAPEG00000016196	gfi1b	100	58.559	Amphiprion_percula
ENSLAFG00000022367	GFI1B	100	58.430	ENSATEG00000002534	gfi1b	100	58.892	Anabas_testudineus
ENSLAFG00000022367	GFI1B	100	68.639	ENSAPLG00000003373	GFI1B	100	68.546	Anas_platyrhynchos
ENSLAFG00000022367	GFI1B	100	55.882	ENSACLG00000027053	gfi1b	100	55.882	Astatotilapia_calliptera
ENSLAFG00000022367	GFI1B	100	60.819	ENSAMXG00000037544	GFI1B	100	60.819	Astyanax_mexicanus
ENSLAFG00000022367	GFI1B	100	78.378	ENSCAPG00000010404	GFI1B	100	78.378	Cavia_aperea
ENSLAFG00000022367	GFI1B	100	69.186	ENSCPBG00000021186	GFI1B	100	69.186	Chrysemys_picta_bellii
ENSLAFG00000022367	GFI1B	100	57.267	ENSCSEG00000001315	gfi1b	100	56.447	Cynoglossus_semilaevis
ENSLAFG00000022367	GFI1B	100	58.434	ENSCVAG00000017168	gfi1b	100	57.185	Cyprinodon_variegatus
ENSLAFG00000022367	GFI1B	100	60.174	ENSDARG00000079947	gfi1b	96	75.325	Danio_rerio
ENSLAFG00000022367	GFI1B	69	80.702	ENSEEUG00000012609	-	100	65.789	Erinaceus_europaeus
ENSLAFG00000022367	GFI1B	100	59.064	ENSELUG00000016933	gfi1b	100	58.480	Esox_lucius
ENSLAFG00000022367	GFI1B	100	64.481	ENSFALG00000001479	GFI1B	100	64.208	Ficedula_albicollis
ENSLAFG00000022367	GFI1B	100	57.434	ENSFHEG00000015138	gfi1b	100	57.434	Fundulus_heteroclitus
ENSLAFG00000022367	GFI1B	78	69.884	ENSGMOG00000019123	gfi1b	86	74.678	Gadus_morhua
ENSLAFG00000022367	GFI1B	100	68.497	ENSGALG00000003478	GFI1B	100	68.497	Gallus_gallus
ENSLAFG00000022367	GFI1B	71	70.886	ENSGAFG00000003059	gfi1b	97	71.983	Gambusia_affinis
ENSLAFG00000022367	GFI1B	100	55.028	ENSGACG00000018134	gfi1b	100	55.028	Gasterosteus_aculeatus
ENSLAFG00000022367	GFI1B	100	71.045	ENSGAGG00000021327	GFI1B	100	70.571	Gopherus_agassizii
ENSLAFG00000022367	GFI1B	100	55.882	ENSHBUG00000005451	gfi1b	100	55.882	Haplochromis_burtoni
ENSLAFG00000022367	GFI1B	100	59.517	ENSHCOG00000013713	gfi1b	100	59.819	Hippocampus_comes
ENSLAFG00000022367	GFI1B	100	60.000	ENSIPUG00000012769	gfi1b	100	60.000	Ictalurus_punctatus
ENSLAFG00000022367	GFI1B	99	78.356	ENSJJAG00000016355	Gfi1b	100	78.356	Jaculus_jaculus
ENSLAFG00000022367	GFI1B	100	58.772	ENSKMAG00000016047	gfi1b	100	59.281	Kryptolebias_marmoratus
ENSLAFG00000022367	GFI1B	100	58.092	ENSLBEG00000020297	gfi1b	99	58.213	Labrus_bergylta
ENSLAFG00000022367	GFI1B	100	63.798	ENSLACG00000012207	GFI1B	100	63.798	Latimeria_chalumnae
ENSLAFG00000022367	GFI1B	100	59.483	ENSLOCG00000005750	gfi1b	100	58.974	Lepisosteus_oculatus
ENSLAFG00000022367	GFI1B	100	58.892	ENSMAMG00000003040	gfi1b	100	58.892	Mastacembelus_armatus
ENSLAFG00000022367	GFI1B	99	56.047	ENSMZEG00005015594	gfi1b	99	56.047	Maylandia_zebra
ENSLAFG00000022367	GFI1B	100	68.208	ENSMGAG00000006129	GFI1B	100	68.103	Meleagris_gallopavo
ENSLAFG00000022367	GFI1B	100	58.309	ENSMMOG00000011764	gfi1b	100	57.726	Mola_mola
ENSLAFG00000022367	GFI1B	100	68.320	ENSMODG00000012600	GFI1B	100	68.044	Monodelphis_domestica
ENSLAFG00000022367	GFI1B	100	59.050	ENSMALG00000004034	gfi1b	100	59.050	Monopterus_albus
ENSLAFG00000022367	GFI1B	99	84.195	ENSNGAG00000003333	Gfi1b	100	84.195	Nannospalax_galili
ENSLAFG00000022367	GFI1B	51	54.478	ENSNBRG00000012376	-	99	62.687	Neolamprologus_brichardi
ENSLAFG00000022367	GFI1B	100	54.913	ENSNBRG00000012391	gfi1b	100	54.913	Neolamprologus_brichardi
ENSLAFG00000022367	GFI1B	100	55.202	ENSONIG00000013011	gfi1b	94	81.006	Oreochromis_niloticus
ENSLAFG00000022367	GFI1B	100	73.333	ENSOANG00000014723	GFI1B	100	73.333	Ornithorhynchus_anatinus
ENSLAFG00000022367	GFI1B	98	51.264	ENSORLG00000014390	GFI1B	100	46.547	Oryzias_latipes
ENSLAFG00000022367	GFI1B	100	58.258	ENSORLG00020003719	GFI1B	100	58.258	Oryzias_latipes_hni
ENSLAFG00000022367	GFI1B	100	57.958	ENSORLG00015017142	gfi1b	100	57.958	Oryzias_latipes_hsok
ENSLAFG00000022367	GFI1B	100	58.407	ENSOMEG00000015149	GFI1B	100	58.683	Oryzias_melastigma
ENSLAFG00000022367	GFI1B	100	85.498	ENSOGAG00000008879	GFI1B	100	85.498	Otolemur_garnettii
ENSLAFG00000022367	GFI1B	100	60.933	ENSPKIG00000007643	gfi1b	100	60.641	Paramormyrops_kingsleyae
ENSLAFG00000022367	GFI1B	100	71.387	ENSPSIG00000012112	GFI1B	100	71.098	Pelodiscus_sinensis
ENSLAFG00000022367	GFI1B	99	58.284	ENSPMGG00000006021	gfi1b	99	58.876	Periophthalmus_magnuspinnatus
ENSLAFG00000022367	GFI1B	100	67.486	ENSPCIG00000019724	GFI1B	100	66.940	Phascolarctos_cinereus
ENSLAFG00000022367	GFI1B	100	57.714	ENSPFOG00000003460	gfi1b	100	57.307	Poecilia_formosa
ENSLAFG00000022367	GFI1B	100	58.358	ENSPLAG00000021960	GFI1B	100	58.017	Poecilia_latipinna
ENSLAFG00000022367	GFI1B	100	57.714	ENSPLAG00000017181	GFI1B	100	57.714	Poecilia_latipinna
ENSLAFG00000022367	GFI1B	100	58.358	ENSPMEG00000019220	gfi1b	100	58.017	Poecilia_mexicana
ENSLAFG00000022367	GFI1B	100	58.358	ENSPMEG00000001556	GFI1B	100	58.017	Poecilia_mexicana
ENSLAFG00000022367	GFI1B	100	57.434	ENSPREG00000021718	gfi1b	100	57.434	Poecilia_reticulata
ENSLAFG00000022367	GFI1B	100	55.000	ENSPNYG00000018422	gfi1b	100	55.000	Pundamilia_nyererei
ENSLAFG00000022367	GFI1B	100	60.641	ENSPNAG00000021118	gfi1b	100	60.641	Pygocentrus_nattereri
ENSLAFG00000022367	GFI1B	100	62.088	ENSSHAG00000006462	GFI1B	100	61.538	Sarcophilus_harrisii
ENSLAFG00000022367	GFI1B	60	64.000	ENSSFOG00015011566	gfi1b	91	52.431	Scleropages_formosus
ENSLAFG00000022367	GFI1B	99	60.000	ENSSMAG00000015181	gfi1b	99	60.000	Scophthalmus_maximus
ENSLAFG00000022367	GFI1B	100	60.294	ENSSDUG00000011604	gfi1b	100	60.294	Seriola_dumerili
ENSLAFG00000022367	GFI1B	100	60.588	ENSSLDG00000013823	gfi1b	100	60.588	Seriola_lalandi_dorsalis
ENSLAFG00000022367	GFI1B	100	60.057	ENSSPUG00000016039	GFI1B	100	60.057	Sphenodon_punctatus
ENSLAFG00000022367	GFI1B	100	58.997	ENSSPAG00000022914	gfi1b	100	58.997	Stegastes_partitus
ENSLAFG00000022367	GFI1B	52	93.860	ENSTGUG00000005282	-	100	93.860	Taeniopygia_guttata
ENSLAFG00000022367	GFI1B	68	60.227	ENSTGUG00000015953	-	92	59.322	Taeniopygia_guttata
ENSLAFG00000022367	GFI1B	100	59.226	ENSTRUG00000004525	gfi1b	100	58.824	Takifugu_rubripes
ENSLAFG00000022367	GFI1B	100	58.631	ENSTNIG00000003834	gfi1b	100	58.333	Tetraodon_nigroviridis
ENSLAFG00000022367	GFI1B	100	71.515	ENSTBEG00000014459	GFI1B	100	71.515	Tupaia_belangeri
ENSLAFG00000022367	GFI1B	100	61.696	ENSXETG00000006263	gfi1b	100	61.628	Xenopus_tropicalis
ENSLAFG00000022367	GFI1B	100	58.601	ENSXMAG00000027589	gfi1b	100	58.601	Xiphophorus_maculatus