EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000022901 (Gene tree)
Gene ID: -
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 20111 bases
Position: chrscaffold_67:10743717-10763827
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017567	Nop52	PF05997.12	6.4e-66	1	1
ENSLAFP00000018343	Nop52	PF05997.12	8.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000022009	RRP1-201	1338	-	ENSLAFP00000017567	446 (aa)	-	G3TPZ9
ENSLAFT00000036687	RRP1-202	1467	-	ENSLAFP00000018343	489 (aa)	-	G3TRY5

Gene Model

Click here to download ENSLAFG00000022901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000022901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000022901	RRP1	94	49.048	ENSLAFG00000000766	RRP1B	85	53.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000022901	RRP1	91	69.042	ENSG00000160214	RRP1	98	95.455	Homo_sapiens
ENSLAFG00000022901	RRP1	86	49.490	ENSAMEG00000011401	RRP1B	52	49.616	Ailuropoda_melanoleuca
ENSLAFG00000022901	RRP1	99	64.502	ENSAMEG00000011448	RRP1	86	68.750	Ailuropoda_melanoleuca
ENSLAFG00000022901	RRP1	65	45.424	ENSACIG00000019121	rrp1	59	53.110	Amphilophus_citrinellus
ENSLAFG00000022901	RRP1	78	46.552	ENSAOCG00000017894	-	75	47.059	Amphiprion_ocellaris
ENSLAFG00000022901	RRP1	77	68.338	ENSANAG00000037815	RRP1	77	73.913	Aotus_nancymaae
ENSLAFG00000022901	RRP1	100	61.207	ENSBTAG00000003981	RRP1	93	78.740	Bos_taurus
ENSLAFG00000022901	RRP1	88	47.015	ENSBTAG00000017418	RRP1B	53	47.304	Bos_taurus
ENSLAFG00000022901	RRP1	92	65.986	ENSCJAG00000043205	RRP1	78	71.503	Callithrix_jacchus
ENSLAFG00000022901	RRP1	84	50.639	ENSCJAG00000017077	RRP1B	50	50.639	Callithrix_jacchus
ENSLAFG00000022901	RRP1	97	62.039	ENSCAFG00000010646	RRP1	88	65.311	Canis_familiaris
ENSLAFG00000022901	RRP1	87	49.752	ENSCAFG00020018901	RRP1B	52	51.026	Canis_lupus_dingo
ENSLAFG00000022901	RRP1	97	62.039	ENSCAFG00020018979	RRP1	83	69.610	Canis_lupus_dingo
ENSLAFG00000022901	RRP1	100	62.716	ENSCHIG00000020948	RRP1	83	69.948	Capra_hircus
ENSLAFG00000022901	RRP1	85	49.610	ENSCHIG00000021519	RRP1B	53	48.259	Capra_hircus
ENSLAFG00000022901	RRP1	99	58.149	ENSTSYG00000012831	RRP1	99	58.621	Carlito_syrichta
ENSLAFG00000022901	RRP1	81	56.691	ENSCAPG00000008576	RRP1	96	59.536	Cavia_aperea
ENSLAFG00000022901	RRP1	92	45.278	ENSCPOG00000002396	RRP1B	53	46.366	Cavia_porcellus
ENSLAFG00000022901	RRP1	79	78.629	ENSCPOG00000038986	RRP1	82	67.282	Cavia_porcellus
ENSLAFG00000022901	RRP1	84	50.904	ENSCCAG00000029384	RRP1B	56	50.000	Cebus_capucinus
ENSLAFG00000022901	RRP1	99	65.957	ENSCCAG00000029828	RRP1	82	72.798	Cebus_capucinus
ENSLAFG00000022901	RRP1	98	59.343	ENSCATG00000015632	RRP1	99	63.214	Cercocebus_atys
ENSLAFG00000022901	RRP1	98	63.496	ENSCLAG00000011639	RRP1	99	62.637	Chinchilla_lanigera
ENSLAFG00000022901	RRP1	76	73.021	ENSCSAG00000007936	RRP1	100	73.021	Chlorocebus_sabaeus
ENSLAFG00000022901	RRP1	75	43.452	ENSCHOG00000002426	-	54	43.452	Choloepus_hoffmanni
ENSLAFG00000022901	RRP1	77	32.194	ENSCING00000003304	-	73	32.479	Ciona_intestinalis
ENSLAFG00000022901	RRP1	89	59.069	ENSCANG00000042611	RRP1	84	59.606	Colobus_angolensis_palliatus
ENSLAFG00000022901	RRP1	75	53.216	ENSCGRG00001023882	-	55	69.841	Cricetulus_griseus_chok1gshd
ENSLAFG00000022901	RRP1	75	53.216	ENSCGRG00001010889	-	50	49.744	Cricetulus_griseus_chok1gshd
ENSLAFG00000022901	RRP1	99	61.659	ENSCGRG00001011920	Rrp1	99	60.674	Cricetulus_griseus_chok1gshd
ENSLAFG00000022901	RRP1	99	61.659	ENSCGRG00000008915	Rrp1	99	60.674	Cricetulus_griseus_crigri
ENSLAFG00000022901	RRP1	84	45.093	ENSCSEG00000020711	-	58	55.172	Cynoglossus_semilaevis
ENSLAFG00000022901	RRP1	80	44.663	ENSCVAG00000017568	-	88	44.663	Cyprinodon_variegatus
ENSLAFG00000022901	RRP1	77	46.356	ENSDARG00000103337	rrp1	50	52.119	Danio_rerio
ENSLAFG00000022901	RRP1	100	63.907	ENSDNOG00000019880	RRP1	100	63.057	Dasypus_novemcinctus
ENSLAFG00000022901	RRP1	68	80.105	ENSDORG00000002104	Rrp1	80	66.566	Dipodomys_ordii
ENSLAFG00000022901	RRP1	76	64.985	ENSETEG00000002963	-	73	73.810	Echinops_telfairi
ENSLAFG00000022901	RRP1	88	47.264	ENSETEG00000019489	RRP1B	52	47.395	Echinops_telfairi
ENSLAFG00000022901	RRP1	98	65.721	ENSEASG00005001673	RRP1	100	73.064	Equus_asinus_asinus
ENSLAFG00000022901	RRP1	84	50.765	ENSEASG00005001687	RRP1B	50	50.510	Equus_asinus_asinus
ENSLAFG00000022901	RRP1	84	50.765	ENSECAG00000018018	RRP1B	50	50.510	Equus_caballus
ENSLAFG00000022901	RRP1	98	65.721	ENSECAG00000015703	RRP1	100	73.737	Equus_caballus
ENSLAFG00000022901	RRP1	89	42.790	ENSELUG00000015885	-	95	43.213	Esox_lucius
ENSLAFG00000022901	RRP1	88	49.000	ENSFCAG00000010272	RRP1B	53	49.123	Felis_catus
ENSLAFG00000022901	RRP1	86	71.615	ENSFCAG00000008434	RRP1	83	72.135	Felis_catus
ENSLAFG00000022901	RRP1	99	60.841	ENSFDAG00000013728	RRP1	83	71.127	Fukomys_damarensis
ENSLAFG00000022901	RRP1	78	43.391	ENSGMOG00000001953	-	50	51.754	Gadus_morhua
ENSLAFG00000022901	RRP1	89	53.383	ENSGALG00000035696	RRP1B	50	53.634	Gallus_gallus
ENSLAFG00000022901	RRP1	89	41.814	ENSGACG00000001438	rrp1	57	50.403	Gasterosteus_aculeatus
ENSLAFG00000022901	RRP1	91	69.287	ENSGGOG00000000173	RRP1	99	65.236	Gorilla_gorilla
ENSLAFG00000022901	RRP1	82	48.533	ENSHGLG00000004968	RRP1B	54	48.533	Heterocephalus_glaber_female
ENSLAFG00000022901	RRP1	91	65.931	ENSHGLG00000017085	RRP1	79	68.407	Heterocephalus_glaber_female
ENSLAFG00000022901	RRP1	77	43.258	ENSIPUG00000000673	-	67	44.759	Ictalurus_punctatus
ENSLAFG00000022901	RRP1	78	51.862	ENSSTOG00000011790	RRP1B	55	48.507	Ictidomys_tridecemlineatus
ENSLAFG00000022901	RRP1	89	69.750	ENSSTOG00000011116	RRP1	88	77.857	Ictidomys_tridecemlineatus
ENSLAFG00000022901	RRP1	99	62.584	ENSJJAG00000018886	Rrp1	98	78.906	Jaculus_jaculus
ENSLAFG00000022901	RRP1	74	48.246	ENSJJAG00000021279	Rrp1b	55	43.839	Jaculus_jaculus
ENSLAFG00000022901	RRP1	76	45.225	ENSKMAG00000005539	rrp1	51	44.944	Kryptolebias_marmoratus
ENSLAFG00000022901	RRP1	78	45.658	ENSLBEG00000021417	RRP1	93	44.533	Labrus_bergylta
ENSLAFG00000022901	RRP1	96	46.347	ENSLACG00000017332	-	52	48.010	Latimeria_chalumnae
ENSLAFG00000022901	RRP1	78	49.008	ENSLOCG00000004064	-	53	44.417	Lepisosteus_oculatus
ENSLAFG00000022901	RRP1	99	63.404	ENSMFAG00000003202	RRP1	99	62.185	Macaca_fascicularis
ENSLAFG00000022901	RRP1	99	63.191	ENSMMUG00000012304	RRP1	99	61.975	Macaca_mulatta
ENSLAFG00000022901	RRP1	84	51.671	ENSMMUG00000000104	RRP1B	50	51.671	Macaca_mulatta
ENSLAFG00000022901	RRP1	99	64.255	ENSMNEG00000031210	RRP1	99	62.395	Macaca_nemestrina
ENSLAFG00000022901	RRP1	83	66.033	ENSMLEG00000037797	RRP1	99	60.789	Mandrillus_leucophaeus
ENSLAFG00000022901	RRP1	89	53.535	ENSMGAG00000014591	RRP1B	51	53.283	Meleagris_gallopavo
ENSLAFG00000022901	RRP1	99	51.810	ENSMAUG00000017653	Rrp1	98	52.809	Mesocricetus_auratus
ENSLAFG00000022901	RRP1	99	65.055	ENSMICG00000004700	RRP1	99	63.877	Microcebus_murinus
ENSLAFG00000022901	RRP1	87	50.250	ENSMICG00000004686	RRP1B	53	50.250	Microcebus_murinus
ENSLAFG00000022901	RRP1	75	47.774	ENSMOCG00000001117	Rrp1b	52	43.909	Microtus_ochrogaster
ENSLAFG00000022901	RRP1	99	52.104	ENSMOCG00000015687	Rrp1	99	50.489	Microtus_ochrogaster
ENSLAFG00000022901	RRP1	82	41.645	ENSMMOG00000019175	rrp1	91	41.755	Mola_mola
ENSLAFG00000022901	RRP1	98	50.959	ENSMODG00000021036	-	67	51.627	Monodelphis_domestica
ENSLAFG00000022901	RRP1	78	45.429	ENSMALG00000010310	rrp1	88	45.429	Monopterus_albus
ENSLAFG00000022901	RRP1	75	49.275	MGP_CAROLIEiJ_G0021376	Rrp1b	53	66.667	Mus_caroli
ENSLAFG00000022901	RRP1	96	74.219	MGP_CAROLIEiJ_G0015508	Rrp1	96	67.931	Mus_caroli
ENSLAFG00000022901	RRP1	98	74.219	ENSMUSG00000061032	Rrp1	99	57.114	Mus_musculus
ENSLAFG00000022901	RRP1	75	50.435	ENSMUSG00000058392	Rrp1b	53	68.254	Mus_musculus
ENSLAFG00000022901	RRP1	78	49.721	MGP_PahariEiJ_G0023695	Rrp1b	53	66.667	Mus_pahari
ENSLAFG00000022901	RRP1	93	78.814	MGP_PahariEiJ_G0030921	Rrp1	99	55.929	Mus_pahari
ENSLAFG00000022901	RRP1	98	74.219	MGP_SPRETEiJ_G0016321	Rrp1	99	56.513	Mus_spretus
ENSLAFG00000022901	RRP1	75	51.594	MGP_SPRETEiJ_G0022290	Rrp1b	53	68.254	Mus_spretus
ENSLAFG00000022901	RRP1	87	66.279	ENSMPUG00000009826	RRP1	88	66.512	Mustela_putorius_furo
ENSLAFG00000022901	RRP1	72	46.364	ENSMPUG00000009810	RRP1B	54	45.058	Mustela_putorius_furo
ENSLAFG00000022901	RRP1	85	52.062	ENSMLUG00000007738	RRP1B	50	52.196	Myotis_lucifugus
ENSLAFG00000022901	RRP1	89	86.463	ENSMLUG00000017788	RRP1	99	61.858	Myotis_lucifugus
ENSLAFG00000022901	RRP1	83	51.683	ENSNGAG00000022344	Rrp1	88	51.628	Nannospalax_galili
ENSLAFG00000022901	RRP1	87	46.547	ENSNGAG00000021073	Rrp1b	51	46.547	Nannospalax_galili
ENSLAFG00000022901	RRP1	91	68.550	ENSNLEG00000034734	RRP1	99	64.240	Nomascus_leucogenys
ENSLAFG00000022901	RRP1	84	51.671	ENSNLEG00000001490	RRP1B	51	51.671	Nomascus_leucogenys
ENSLAFG00000022901	RRP1	83	61.456	ENSOPRG00000001319	RRP1	99	67.883	Ochotona_princeps
ENSLAFG00000022901	RRP1	86	46.582	ENSOANG00000006470	RRP1B	51	45.792	Ornithorhynchus_anatinus
ENSLAFG00000022901	RRP1	78	57.184	ENSOANG00000006472	-	99	52.507	Ornithorhynchus_anatinus
ENSLAFG00000022901	RRP1	81	49.882	ENSOCUG00000022843	-	99	50.000	Oryctolagus_cuniculus
ENSLAFG00000022901	RRP1	80	51.532	ENSOGAG00000009872	RRP1B	53	63.713	Otolemur_garnettii
ENSLAFG00000022901	RRP1	99	63.158	ENSOGAG00000006105	RRP1	98	64.018	Otolemur_garnettii
ENSLAFG00000022901	RRP1	76	47.339	ENSOARG00000011314	RRP1B	51	45.989	Ovis_aries
ENSLAFG00000022901	RRP1	78	84.279	ENSOARG00000011434	RRP1	74	71.386	Ovis_aries
ENSLAFG00000022901	RRP1	91	69.533	ENSPPAG00000029050	RRP1	99	65.310	Pan_paniscus
ENSLAFG00000022901	RRP1	84	72.074	ENSPPRG00000010656	RRP1	96	61.777	Panthera_pardus
ENSLAFG00000022901	RRP1	74	49.390	ENSPTIG00000016894	RRP1B	54	49.390	Panthera_tigris_altaica
ENSLAFG00000022901	RRP1	83	56.675	ENSPTIG00000019473	RRP1	76	61.143	Panthera_tigris_altaica
ENSLAFG00000022901	RRP1	91	69.287	ENSPTRG00000013962	RRP1	99	65.310	Pan_troglodytes
ENSLAFG00000022901	RRP1	99	58.498	ENSPANG00000015097	RRP1	99	58.366	Papio_anubis
ENSLAFG00000022901	RRP1	60	56.364	ENSPMGG00000007512	-	93	37.000	Periophthalmus_magnuspinnatus
ENSLAFG00000022901	RRP1	78	50.139	ENSPEMG00000022490	Rrp1b	50	48.346	Peromyscus_maniculatus_bairdii
ENSLAFG00000022901	RRP1	99	60.497	ENSPEMG00000018421	Rrp1	99	61.883	Peromyscus_maniculatus_bairdii
ENSLAFG00000022901	RRP1	86	59.948	ENSPCIG00000015523	-	82	59.948	Phascolarctos_cinereus
ENSLAFG00000022901	RRP1	85	52.835	ENSPCIG00000015513	RRP1B	53	52.835	Phascolarctos_cinereus
ENSLAFG00000022901	RRP1	96	42.793	ENSPFOG00000007424	-	50	44.743	Poecilia_formosa
ENSLAFG00000022901	RRP1	85	45.918	ENSPLAG00000016684	-	51	52.672	Poecilia_latipinna
ENSLAFG00000022901	RRP1	91	68.796	ENSPPYG00000011474	RRP1	99	64.026	Pongo_abelii
ENSLAFG00000022901	RRP1	64	79.167	ENSPCAG00000008370	-	89	81.081	Procavia_capensis
ENSLAFG00000022901	RRP1	99	65.714	ENSPCOG00000017706	RRP1	90	81.712	Propithecus_coquereli
ENSLAFG00000022901	RRP1	87	50.000	ENSPCOG00000017927	RRP1B	53	50.000	Propithecus_coquereli
ENSLAFG00000022901	RRP1	83	60.000	ENSPVAG00000009925	-	67	60.000	Pteropus_vampyrus
ENSLAFG00000022901	RRP1	98	61.915	ENSRNOG00000001203	Rrp1	98	62.302	Rattus_norvegicus
ENSLAFG00000022901	RRP1	75	51.190	ENSRNOG00000001194	Rrp1b	50	48.031	Rattus_norvegicus
ENSLAFG00000022901	RRP1	99	58.300	ENSRBIG00000032082	RRP1	99	63.025	Rhinopithecus_bieti
ENSLAFG00000022901	RRP1	91	64.172	ENSRROG00000039799	RRP1	85	68.537	Rhinopithecus_roxellana
ENSLAFG00000022901	RRP1	84	51.671	ENSRROG00000031499	RRP1B	54	51.671	Rhinopithecus_roxellana
ENSLAFG00000022901	RRP1	86	68.983	ENSSBOG00000034689	RRP1	83	68.983	Saimiri_boliviensis_boliviensis
ENSLAFG00000022901	RRP1	76	56.176	ENSSHAG00000010304	-	96	56.598	Sarcophilus_harrisii
ENSLAFG00000022901	RRP1	72	45.994	ENSSFOG00015003932	-	51	46.291	Scleropages_formosus
ENSLAFG00000022901	RRP1	78	45.455	ENSSMAG00000016847	-	83	45.272	Scophthalmus_maximus
ENSLAFG00000022901	RRP1	82	51.781	ENSSSCG00000021698	RRP1B	55	51.781	Sus_scrofa
ENSLAFG00000022901	RRP1	86	69.271	ENSSSCG00000037061	RRP1	83	69.792	Sus_scrofa
ENSLAFG00000022901	RRP1	78	49.003	ENSTRUG00000017592	rrp1	97	49.003	Takifugu_rubripes
ENSLAFG00000022901	RRP1	98	39.440	ENSTNIG00000005053	rrp1	54	46.218	Tetraodon_nigroviridis
ENSLAFG00000022901	RRP1	77	49.858	ENSTBEG00000000422	RRP1B	59	49.858	Tupaia_belangeri
ENSLAFG00000022901	RRP1	75	76.774	ENSTBEG00000001260	-	56	76.774	Tupaia_belangeri
ENSLAFG00000022901	RRP1	64	72.683	ENSTTRG00000011162	RRP1	80	72.683	Tursiops_truncatus
ENSLAFG00000022901	RRP1	88	47.619	ENSTTRG00000000723	RRP1B	54	47.750	Tursiops_truncatus
ENSLAFG00000022901	RRP1	84	51.421	ENSUAMG00000026765	RRP1B	55	51.421	Ursus_americanus
ENSLAFG00000022901	RRP1	73	55.620	ENSUAMG00000014189	-	99	53.933	Ursus_americanus
ENSLAFG00000022901	RRP1	90	60.557	ENSUMAG00000025507	RRP1	100	58.454	Ursus_maritimus
ENSLAFG00000022901	RRP1	78	49.435	ENSUMAG00000025510	RRP1B	66	49.435	Ursus_maritimus
ENSLAFG00000022901	RRP1	79	48.493	ENSVVUG00000024509	RRP1B	50	48.493	Vulpes_vulpes
ENSLAFG00000022901	RRP1	68	51.524	ENSVVUG00000024498	-	57	60.851	Vulpes_vulpes