EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000022929 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Plus strand
Length
7492 bases
Position
chrscaffold_146:446095-453586
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000017852RRM_1PF00076.224.2e-4012
ENSLAFP00000017852RRM_1PF00076.224.2e-4022
ENSLAFP00000021243RRM_1PF00076.221.9e-3912
ENSLAFP00000021243RRM_1PF00076.221.9e-3922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000021660PUF60-2021668-ENSLAFP00000017852556 (aa)-G3TQL4
ENSLAFT00000032305PUF60-2011668-ENSLAFP00000021243555 (aa)-G3U085
Gene Model
Click here to download ENSLAFG00000022929's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000022929's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000022929PUF605835.294ENSLAFG00000018056-6137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000022929PUF6010096.057ENSG00000179950PUF6010098.062Homo_sapiens
ENSLAFG00000022929PUF609484.848ENSAPOG00000001713puf60b9984.848Acanthochromis_polyacanthus
ENSLAFG00000022929PUF609995.455ENSAMEG00000006406PUF609995.455Ailuropoda_melanoleuca
ENSLAFG00000022929PUF609384.453ENSACIG00000021705puf60b10084.453Amphilophus_citrinellus
ENSLAFG00000022929PUF609376.008ENSACIG00000003263-9976.437Amphilophus_citrinellus
ENSLAFG00000022929PUF609480.418ENSAOCG00000015558-9980.989Amphiprion_ocellaris
ENSLAFG00000022929PUF609484.820ENSAOCG00000005395puf60b10085.413Amphiprion_ocellaris
ENSLAFG00000022929PUF609371.593ENSAPEG00000001836-9973.055Amphiprion_percula
ENSLAFG00000022929PUF609479.356ENSAPEG00000011923puf60b9979.356Amphiprion_percula
ENSLAFG00000022929PUF609479.810ENSATEG00000006303-9980.190Anabas_testudineus
ENSLAFG00000022929PUF609484.659ENSATEG00000001730puf60b9984.659Anabas_testudineus
ENSLAFG00000022929PUF609497.126ENSAPLG00000010150PUF6010097.126Anas_platyrhynchos
ENSLAFG00000022929PUF609495.611ENSACAG00000001645PUF609795.256Anolis_carolinensis
ENSLAFG00000022929PUF6010095.374ENSANAG00000018626PUF6010098.062Aotus_nancymaae
ENSLAFG00000022929PUF609384.453ENSACLG00000004462puf60b10084.453Astatotilapia_calliptera
ENSLAFG00000022929PUF609375.514ENSAMXG00000041030puf60b10073.783Astyanax_mexicanus
ENSLAFG00000022929PUF609483.364ENSAMXG00000036570puf60a10080.364Astyanax_mexicanus
ENSLAFG00000022929PUF6010095.722ENSBTAG00000037493PUF609998.084Bos_taurus
ENSLAFG00000022929PUF607848.750WBGene00004389rnp-68949.536Caenorhabditis_elegans
ENSLAFG00000022929PUF6010095.382ENSCJAG00000021485PUF609898.084Callithrix_jacchus
ENSLAFG00000022929PUF6010096.780ENSCAFG00000001400PUF6010096.429Canis_familiaris
ENSLAFG00000022929PUF6010096.243ENSCAFG00020018754PUF609898.276Canis_lupus_dingo
ENSLAFG00000022929PUF6010096.948ENSCHIG00000001618PUF609396.948Capra_hircus
ENSLAFG00000022929PUF6010095.560ENSTSYG00000011912PUF6010098.450Carlito_syrichta
ENSLAFG00000022929PUF609991.562ENSCPOG00000014613PUF609592.884Cavia_porcellus
ENSLAFG00000022929PUF6010095.374ENSCCAG00000007744PUF609897.893Cebus_capucinus
ENSLAFG00000022929PUF6010096.057ENSCATG00000035405PUF609897.893Cercocebus_atys
ENSLAFG00000022929PUF6010095.737ENSCLAG00000009154PUF609995.737Chinchilla_lanigera
ENSLAFG00000022929PUF609398.062ENSCSAG00000008878PUF6010098.062Chlorocebus_sabaeus
ENSLAFG00000022929PUF609497.318ENSCPBG00000005595PUF609897.318Chrysemys_picta_bellii
ENSLAFG00000022929PUF609447.681ENSCING00000008436-9847.932Ciona_intestinalis
ENSLAFG00000022929PUF605958.702ENSCING00000002156-8758.702Ciona_intestinalis
ENSLAFG00000022929PUF609049.307ENSCSAVG00000004765-9748.907Ciona_savignyi
ENSLAFG00000022929PUF609054.789ENSCSAVG00000001385-9954.423Ciona_savignyi
ENSLAFG00000022929PUF608192.920ENSCANG00000041843PUF6010097.842Colobus_angolensis_palliatus
ENSLAFG00000022929PUF6010095.027ENSCGRG00001017442Puf609995.027Cricetulus_griseus_chok1gshd
ENSLAFG00000022929PUF609995.893ENSCGRG00000003717Puf609995.893Cricetulus_griseus_crigri
ENSLAFG00000022929PUF609484.061ENSCSEG00000019887puf60b9383.871Cynoglossus_semilaevis
ENSLAFG00000022929PUF609371.128ENSCSEG00000014845-8973.423Cynoglossus_semilaevis
ENSLAFG00000022929PUF609383.493ENSCVAG00000009386puf60b10084.645Cyprinodon_variegatus
ENSLAFG00000022929PUF608579.368ENSCVAG00000001560-9879.114Cyprinodon_variegatus
ENSLAFG00000022929PUF609385.795ENSDARG00000032175puf60a9993.617Danio_rerio
ENSLAFG00000022929PUF609377.820ENSDARG00000001241puf60b9995.238Danio_rerio
ENSLAFG00000022929PUF6010080.392ENSDNOG00000043278PUF6010080.214Dasypus_novemcinctus
ENSLAFG00000022929PUF609997.459ENSDORG00000004585Puf6010097.459Dipodomys_ordii
ENSLAFG00000022929PUF609049.225FBgn0028577hfp9945.811Drosophila_melanogaster
ENSLAFG00000022929PUF609069.384ENSEBUG00000005470-8868.986Eptatretus_burgeri
ENSLAFG00000022929PUF609461.785ENSEBUG00000014291puf60b8563.345Eptatretus_burgeri
ENSLAFG00000022929PUF6010096.243ENSEASG00005009695PUF609898.276Equus_asinus_asinus
ENSLAFG00000022929PUF609997.107ENSECAG00000024681PUF609997.107Equus_caballus
ENSLAFG00000022929PUF609682.904ENSELUG00000018443-9884.470Esox_lucius
ENSLAFG00000022929PUF609482.922ENSELUG00000006507puf60b9979.670Esox_lucius
ENSLAFG00000022929PUF6010095.204ENSFCAG00000001045PUF6010098.062Felis_catus
ENSLAFG00000022929PUF609484.483ENSFALG00000001136PUF609885.632Ficedula_albicollis
ENSLAFG00000022929PUF6010095.382ENSFDAG00000017177PUF609995.382Fukomys_damarensis
ENSLAFG00000022929PUF608978.514ENSFHEG00000021687PUF6010079.346Fundulus_heteroclitus
ENSLAFG00000022929PUF609483.302ENSFHEG00000020046puf60b10085.029Fundulus_heteroclitus
ENSLAFG00000022929PUF609470.865ENSGMOG00000006392puf60b10070.113Gadus_morhua
ENSLAFG00000022929PUF606296.512ENSGALG00000039901PUF609496.512Gallus_gallus
ENSLAFG00000022929PUF609482.732ENSGAFG00000021040puf60b10084.453Gambusia_affinis
ENSLAFG00000022929PUF609378.378ENSGAFG00000004334-9977.799Gambusia_affinis
ENSLAFG00000022929PUF609369.615ENSGACG00000001484-10068.462Gasterosteus_aculeatus
ENSLAFG00000022929PUF609472.590ENSGACG00000004717puf60b9871.917Gasterosteus_aculeatus
ENSLAFG00000022929PUF609497.318ENSGAGG00000013289PUF609297.318Gopherus_agassizii
ENSLAFG00000022929PUF6010096.057ENSGGOG00000004646PUF609897.893Gorilla_gorilla
ENSLAFG00000022929PUF609483.871ENSHBUG00000015118puf60b10084.453Haplochromis_burtoni
ENSLAFG00000022929PUF609480.645ENSHBUG00000009634-9980.645Haplochromis_burtoni
ENSLAFG00000022929PUF6010095.382ENSHGLG00000006111PUF609995.382Heterocephalus_glaber_female
ENSLAFG00000022929PUF6010095.382ENSHGLG00100012362PUF609995.382Heterocephalus_glaber_male
ENSLAFG00000022929PUF609381.215ENSHCOG00000015541puf60b10080.812Hippocampus_comes
ENSLAFG00000022929PUF609166.012ENSHCOG00000000378-9964.098Hippocampus_comes
ENSLAFG00000022929PUF609377.632ENSIPUG00000004660puf60b9977.401Ictalurus_punctatus
ENSLAFG00000022929PUF609381.285ENSIPUG00000002453puf60a9981.664Ictalurus_punctatus
ENSLAFG00000022929PUF6010096.589ENSSTOG00000025037PUF609996.589Ictidomys_tridecemlineatus
ENSLAFG00000022929PUF6010095.722ENSJJAG00000001076Puf609995.722Jaculus_jaculus
ENSLAFG00000022929PUF609377.316ENSKMAG00000010106-10074.813Kryptolebias_marmoratus
ENSLAFG00000022929PUF609383.877ENSKMAG00000016745puf60b10085.029Kryptolebias_marmoratus
ENSLAFG00000022929PUF609784.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSLAFG00000022929PUF606589.256ENSLACG00000005456PUF609988.981Latimeria_chalumnae
ENSLAFG00000022929PUF609588.701ENSLOCG00000010106puf60b9988.403Lepisosteus_oculatus
ENSLAFG00000022929PUF6010096.057ENSMFAG00000043373PUF609997.893Macaca_fascicularis
ENSLAFG00000022929PUF6010095.886ENSMMUG00000013558PUF609897.893Macaca_mulatta
ENSLAFG00000022929PUF6010096.057ENSMNEG00000031099PUF609897.893Macaca_nemestrina
ENSLAFG00000022929PUF609398.062ENSMLEG00000040009PUF6010098.062Mandrillus_leucophaeus
ENSLAFG00000022929PUF609481.594ENSMAMG00000019476-9981.214Mastacembelus_armatus
ENSLAFG00000022929PUF609584.211ENSMAMG00000010394puf60b10082.804Mastacembelus_armatus
ENSLAFG00000022929PUF609480.835ENSMZEG00005019425-9980.835Maylandia_zebra
ENSLAFG00000022929PUF609384.453ENSMZEG00005018515puf60b10084.453Maylandia_zebra
ENSLAFG00000022929PUF609497.126ENSMGAG00000013070PUF609897.126Meleagris_gallopavo
ENSLAFG00000022929PUF607293.366ENSMAUG00000014267-9993.366Mesocricetus_auratus
ENSLAFG00000022929PUF608979.559ENSMAUG00000018549-9579.800Mesocricetus_auratus
ENSLAFG00000022929PUF6010096.403ENSMICG00000012226PUF609998.276Microcebus_murinus
ENSLAFG00000022929PUF609996.223ENSMOCG00000018780Puf609996.223Microtus_ochrogaster
ENSLAFG00000022929PUF609384.837ENSMMOG00000004217puf60b10084.837Mola_mola
ENSLAFG00000022929PUF609471.810ENSMMOG00000018059-9975.342Mola_mola
ENSLAFG00000022929PUF6010095.504ENSMODG00000009161PUF609995.504Monodelphis_domestica
ENSLAFG00000022929PUF609479.507ENSMALG00000000200-9978.302Monopterus_albus
ENSLAFG00000022929PUF609477.083ENSMALG00000006797puf60b9977.186Monopterus_albus
ENSLAFG00000022929PUF6010095.027MGP_CAROLIEiJ_G0019910Puf609995.027Mus_caroli
ENSLAFG00000022929PUF6010095.027ENSMUSG00000002524Puf609995.027Mus_musculus
ENSLAFG00000022929PUF6010095.027MGP_PahariEiJ_G0019920Puf609995.027Mus_pahari
ENSLAFG00000022929PUF6010095.027MGP_SPRETEiJ_G0020812Puf609995.027Mus_spretus
ENSLAFG00000022929PUF609997.101ENSMPUG00000008137PUF609897.101Mustela_putorius_furo
ENSLAFG00000022929PUF6010096.057ENSMLUG00000000238-9996.583Myotis_lucifugus
ENSLAFG00000022929PUF609491.379ENSMLUG00000013032-9891.379Myotis_lucifugus
ENSLAFG00000022929PUF6010095.382ENSNGAG00000000712Puf6010098.256Nannospalax_galili
ENSLAFG00000022929PUF607682.824ENSNBRG00000013047puf60b9782.824Neolamprologus_brichardi
ENSLAFG00000022929PUF609481.025ENSNBRG00000017223-9980.989Neolamprologus_brichardi
ENSLAFG00000022929PUF6010096.057ENSNLEG00000002156PUF609897.893Nomascus_leucogenys
ENSLAFG00000022929PUF606997.270ENSOPRG00000002147PUF607597.270Ochotona_princeps
ENSLAFG00000022929PUF6073100.000ENSODEG00000014024-98100.000Octodon_degus
ENSLAFG00000022929PUF609173.176ENSODEG00000015513-9970.510Octodon_degus
ENSLAFG00000022929PUF609481.061ENSONIG00000014030-9981.061Oreochromis_niloticus
ENSLAFG00000022929PUF609483.902ENSONIG00000006247puf60b9983.902Oreochromis_niloticus
ENSLAFG00000022929PUF609278.320ENSOANG00000006962PUF609979.216Ornithorhynchus_anatinus
ENSLAFG00000022929PUF609377.841ENSORLG00000028655-9977.947Oryzias_latipes
ENSLAFG00000022929PUF609483.871ENSORLG00000012279puf60b10083.877Oryzias_latipes
ENSLAFG00000022929PUF609483.871ENSORLG00020007333puf6010083.877Oryzias_latipes_hni
ENSLAFG00000022929PUF609477.925ENSORLG00020018144-9878.030Oryzias_latipes_hni
ENSLAFG00000022929PUF609482.987ENSORLG00015007718puf60b10083.748Oryzias_latipes_hsok
ENSLAFG00000022929PUF609378.178ENSORLG00015016833-9878.286Oryzias_latipes_hsok
ENSLAFG00000022929PUF609478.977ENSOMEG00000022185-9878.937Oryzias_melastigma
ENSLAFG00000022929PUF609481.413ENSOMEG00000001643puf60b9982.222Oryzias_melastigma
ENSLAFG00000022929PUF6010097.312ENSOGAG00000006259PUF6010096.959Otolemur_garnettii
ENSLAFG00000022929PUF609495.602ENSOARG00000016235PUF609995.602Ovis_aries
ENSLAFG00000022929PUF6010096.057ENSPPAG00000029933PUF609897.893Pan_paniscus
ENSLAFG00000022929PUF6010095.204ENSPPRG00000003257PUF6010098.062Panthera_pardus
ENSLAFG00000022929PUF609993.309ENSPTIG00000009795PUF609995.594Panthera_tigris_altaica
ENSLAFG00000022929PUF6010095.878ENSPTRG00000020670PUF609897.701Pan_troglodytes
ENSLAFG00000022929PUF6010096.243ENSPTRG00000043963-10096.243Pan_troglodytes
ENSLAFG00000022929PUF6010096.057ENSPANG00000021936PUF609897.893Papio_anubis
ENSLAFG00000022929PUF609485.255ENSPKIG00000004295puf60a9990.882Paramormyrops_kingsleyae
ENSLAFG00000022929PUF609486.122ENSPKIG00000012204puf60b10086.923Paramormyrops_kingsleyae
ENSLAFG00000022929PUF609497.132ENSPSIG00000004679PUF609997.132Pelodiscus_sinensis
ENSLAFG00000022929PUF609383.206ENSPMGG00000013444puf60b9983.206Periophthalmus_magnuspinnatus
ENSLAFG00000022929PUF6010095.204ENSPEMG00000008820Puf609995.374Peromyscus_maniculatus_bairdii
ENSLAFG00000022929PUF609895.247ENSPCIG00000020270PUF609998.273Phascolarctos_cinereus
ENSLAFG00000022929PUF609483.302ENSPFOG00000019217puf60b10081.168Poecilia_formosa
ENSLAFG00000022929PUF609379.769ENSPFOG00000011118-9780.116Poecilia_formosa
ENSLAFG00000022929PUF609777.491ENSPLAG00000017025-9079.730Poecilia_latipinna
ENSLAFG00000022929PUF609383.877ENSPLAG00000010754puf60b10085.029Poecilia_latipinna
ENSLAFG00000022929PUF609777.491ENSPMEG00000009767-9080.116Poecilia_mexicana
ENSLAFG00000022929PUF609483.302ENSPMEG00000000838puf60b10085.029Poecilia_mexicana
ENSLAFG00000022929PUF609480.591ENSPREG00000005440puf60b9982.255Poecilia_reticulata
ENSLAFG00000022929PUF607596.163ENSPPYG00000018951-9596.163Pongo_abelii
ENSLAFG00000022929PUF607598.561ENSPCAG00000014837PUF6010098.561Procavia_capensis
ENSLAFG00000022929PUF6010096.250ENSPCOG00000027981PUF609998.467Propithecus_coquereli
ENSLAFG00000022929PUF609399.617ENSPVAG00000016167PUF608199.617Pteropus_vampyrus
ENSLAFG00000022929PUF609480.835ENSPNYG00000004273-9980.835Pundamilia_nyererei
ENSLAFG00000022929PUF609384.453ENSPNYG00000002556puf60b10084.453Pundamilia_nyererei
ENSLAFG00000022929PUF609376.527ENSPNAG00000019415puf60b9073.996Pygocentrus_nattereri
ENSLAFG00000022929PUF609481.629ENSPNAG00000019909puf60a9981.285Pygocentrus_nattereri
ENSLAFG00000022929PUF609996.036ENSRNOG00000009960Puf609996.036Rattus_norvegicus
ENSLAFG00000022929PUF6010096.057ENSRBIG00000035274PUF609897.893Rhinopithecus_bieti
ENSLAFG00000022929PUF6010096.057ENSRROG00000029360PUF609997.893Rhinopithecus_roxellana
ENSLAFG00000022929PUF609695.149ENSSBOG00000027089PUF609896.743Saimiri_boliviensis_boliviensis
ENSLAFG00000022929PUF609194.841ENSSHAG00000006668PUF609694.841Sarcophilus_harrisii
ENSLAFG00000022929PUF609480.797ENSSFOG00015019371puf60a9886.519Scleropages_formosus
ENSLAFG00000022929PUF608985.425ENSSFOG00015019619puf60b9985.425Scleropages_formosus
ENSLAFG00000022929PUF606991.166ENSSMAG00000016381puf60b7391.166Scophthalmus_maximus
ENSLAFG00000022929PUF609379.389ENSSDUG00000007048-9879.580Seriola_dumerili
ENSLAFG00000022929PUF609482.714ENSSDUG00000009935puf60b9983.636Seriola_dumerili
ENSLAFG00000022929PUF609379.317ENSSLDG00000007366-9979.696Seriola_lalandi_dorsalis
ENSLAFG00000022929PUF609682.900ENSSLDG00000024011puf60b10082.991Seriola_lalandi_dorsalis
ENSLAFG00000022929PUF606185.251ENSSPUG00000013518PUF609484.104Sphenodon_punctatus
ENSLAFG00000022929PUF609380.916ENSSPAG00000020285-10081.489Stegastes_partitus
ENSLAFG00000022929PUF609482.070ENSSPAG00000012144puf60b10083.178Stegastes_partitus
ENSLAFG00000022929PUF609997.101ENSSSCG00000038800PUF6010092.964Sus_scrofa
ENSLAFG00000022929PUF609493.870ENSTGUG00000012797-10093.870Taeniopygia_guttata
ENSLAFG00000022929PUF609483.333ENSTRUG00000005420puf60b10081.682Takifugu_rubripes
ENSLAFG00000022929PUF609376.550ENSTRUG00000008843-10076.550Takifugu_rubripes
ENSLAFG00000022929PUF609477.055ENSTNIG00000003069-10077.055Tetraodon_nigroviridis
ENSLAFG00000022929PUF609483.333ENSTNIG00000013675puf60b10083.144Tetraodon_nigroviridis
ENSLAFG00000022929PUF607179.769ENSTBEG00000001899-10080.058Tupaia_belangeri
ENSLAFG00000022929PUF605894.257ENSTBEG00000002751-9994.237Tupaia_belangeri
ENSLAFG00000022929PUF609397.674ENSTTRG00000017088PUF6010097.674Tursiops_truncatus
ENSLAFG00000022929PUF6010096.409ENSUAMG00000024917PUF609898.276Ursus_americanus
ENSLAFG00000022929PUF609593.195ENSUMAG00000000272PUF6010091.577Ursus_maritimus
ENSLAFG00000022929PUF609997.455ENSVVUG00000022527PUF6010098.450Vulpes_vulpes
ENSLAFG00000022929PUF609493.321ENSXETG00000012469puf609993.321Xenopus_tropicalis
ENSLAFG00000022929PUF609380.614ENSXCOG00000012355puf60b10081.766Xiphophorus_couchianus
ENSLAFG00000022929PUF609476.762ENSXMAG00000010507-9976.000Xiphophorus_maculatus
ENSLAFG00000022929PUF609483.302ENSXMAG00000001862puf60b10085.029Xiphophorus_maculatus

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