EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000023096 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 603 bases
Position: chrscaffold_24:28838875-28839477
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000016674	RRM_5	PF13893.6	3.6e-06	1	1
ENSLAFP00000016674	RRM_1	PF00076.22	9.7e-42	1	2
ENSLAFP00000016674	RRM_1	PF00076.22	9.7e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000022080	-	603	-	ENSLAFP00000016674	200 (aa)	-	G3TN89

Gene Model

Click here to download ENSLAFG00000023096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000023096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000023096	-	99	75.510	ENSLAFG00000000151	PABPC4	60	75.510
ENSLAFG00000023096	-	98	78.974	ENSLAFG00000013994	PABPC1	58	78.974
ENSLAFG00000023096	-	99	69.898	ENSLAFG00000003553	PABPC1L	59	69.898
ENSLAFG00000023096	-	97	30.357	ENSLAFG00000003463	TIA1	72	30.667
ENSLAFG00000023096	-	79	31.429	ENSLAFG00000003412	TIAL1	76	31.429
ENSLAFG00000023096	-	79	32.955	ENSLAFG00000030147	CELF3	52	32.955
ENSLAFG00000023096	-	85	32.450	ENSLAFG00000004219	ELAVL1	94	32.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000023096	-	99	97.990	ENSG00000186288	PABPC1L2A	99	97.990	Homo_sapiens
ENSLAFG00000023096	-	99	97.990	ENSG00000184388	PABPC1L2B	99	97.990	Homo_sapiens
ENSLAFG00000023096	-	98	78.974	ENSAPOG00000017776	pabpc1b	61	78.974	Acanthochromis_polyacanthus
ENSLAFG00000023096	-	98	78.974	ENSAPOG00000015105	pabpc1a	58	78.974	Acanthochromis_polyacanthus
ENSLAFG00000023096	-	99	97.487	ENSAMEG00000019441	-	99	97.487	Ailuropoda_melanoleuca
ENSLAFG00000023096	-	98	78.974	ENSACIG00000004685	pabpc1a	58	78.974	Amphilophus_citrinellus
ENSLAFG00000023096	-	98	77.949	ENSACIG00000018366	pabpc1b	60	77.949	Amphilophus_citrinellus
ENSLAFG00000023096	-	98	78.974	ENSAOCG00000011656	pabpc1a	58	78.974	Amphiprion_ocellaris
ENSLAFG00000023096	-	98	79.487	ENSAOCG00000019839	pabpc1b	59	79.487	Amphiprion_ocellaris
ENSLAFG00000023096	-	98	78.974	ENSAPEG00000006963	pabpc1a	58	78.974	Amphiprion_percula
ENSLAFG00000023096	-	98	79.487	ENSAPEG00000010435	pabpc1b	59	79.487	Amphiprion_percula
ENSLAFG00000023096	-	98	78.462	ENSATEG00000012917	pabpc1b	59	78.462	Anabas_testudineus
ENSLAFG00000023096	-	98	78.974	ENSATEG00000024852	pabpc1a	58	78.974	Anabas_testudineus
ENSLAFG00000023096	-	99	97.990	ENSANAG00000019431	-	99	97.990	Aotus_nancymaae
ENSLAFG00000023096	-	99	97.990	ENSANAG00000019429	-	99	97.990	Aotus_nancymaae
ENSLAFG00000023096	-	98	78.974	ENSACLG00000009399	pabpc1a	68	77.778	Astatotilapia_calliptera
ENSLAFG00000023096	-	98	77.436	ENSACLG00000014335	pabpc1b	59	77.436	Astatotilapia_calliptera
ENSLAFG00000023096	-	98	78.974	ENSAMXG00000008599	pabpc1b	59	78.974	Astyanax_mexicanus
ENSLAFG00000023096	-	99	96.985	ENSBTAG00000052491	-	93	96.985	Bos_taurus
ENSLAFG00000023096	-	99	96.482	ENSBTAG00000050902	-	95	96.482	Bos_taurus
ENSLAFG00000023096	-	99	97.990	ENSCJAG00000041326	-	99	97.990	Callithrix_jacchus
ENSLAFG00000023096	-	99	97.487	ENSCAFG00020002052	-	95	97.487	Canis_lupus_dingo
ENSLAFG00000023096	-	99	97.487	ENSCHIG00000011138	-	99	97.487	Capra_hircus
ENSLAFG00000023096	-	99	96.985	ENSCHIG00000006283	-	99	96.985	Capra_hircus
ENSLAFG00000023096	-	99	97.487	ENSTSYG00000001775	-	99	97.487	Carlito_syrichta
ENSLAFG00000023096	-	99	96.985	ENSCPOG00000009525	-	99	96.985	Cavia_porcellus
ENSLAFG00000023096	-	99	97.990	ENSCCAG00000031524	-	99	97.990	Cebus_capucinus
ENSLAFG00000023096	-	99	97.990	ENSCATG00000042826	-	99	97.990	Cercocebus_atys
ENSLAFG00000023096	-	99	97.990	ENSCATG00000043125	-	99	97.990	Cercocebus_atys
ENSLAFG00000023096	-	99	94.975	ENSCLAG00000017412	-	99	94.975	Chinchilla_lanigera
ENSLAFG00000023096	-	99	94.975	ENSCLAG00000017409	-	99	94.975	Chinchilla_lanigera
ENSLAFG00000023096	-	99	97.990	ENSCSAG00000000102	-	99	97.990	Chlorocebus_sabaeus
ENSLAFG00000023096	-	99	91.919	ENSCGRG00001023387	-	97	91.919	Cricetulus_griseus_chok1gshd
ENSLAFG00000023096	-	98	78.974	ENSCSEG00000013324	pabpc1a	58	78.974	Cynoglossus_semilaevis
ENSLAFG00000023096	-	98	78.462	ENSCSEG00000015241	-	58	78.462	Cynoglossus_semilaevis
ENSLAFG00000023096	-	98	78.974	ENSCVAG00000005489	pabpc1b	58	78.974	Cyprinodon_variegatus
ENSLAFG00000023096	-	98	78.974	ENSCVAG00000021872	pabpc1a	58	78.974	Cyprinodon_variegatus
ENSLAFG00000023096	-	98	78.462	ENSDARG00000021140	pabpc1b	92	85.950	Danio_rerio
ENSLAFG00000023096	-	98	78.462	ENSDARG00000017219	pabpc1a	58	78.462	Danio_rerio
ENSLAFG00000023096	-	99	94.975	ENSDNOG00000030926	-	99	94.975	Dasypus_novemcinctus
ENSLAFG00000023096	-	99	94.472	ENSDORG00000011362	-	99	94.472	Dipodomys_ordii
ENSLAFG00000023096	-	99	96.985	ENSEASG00005010399	-	95	96.985	Equus_asinus_asinus
ENSLAFG00000023096	-	99	96.985	ENSECAG00000002620	-	95	96.985	Equus_caballus
ENSLAFG00000023096	-	99	93.970	ENSEEUG00000008203	-	99	93.970	Erinaceus_europaeus
ENSLAFG00000023096	-	98	78.462	ENSELUG00000003614	pabpc1a	60	78.462	Esox_lucius
ENSLAFG00000023096	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSLAFG00000023096	-	98	79.487	ENSELUG00000015062	-	59	79.487	Esox_lucius
ENSLAFG00000023096	-	99	97.487	ENSFCAG00000039701	-	99	97.487	Felis_catus
ENSLAFG00000023096	-	99	96.985	ENSFDAG00000005484	-	99	96.985	Fukomys_damarensis
ENSLAFG00000023096	-	98	78.462	ENSFHEG00000008186	pabpc1b	58	78.462	Fundulus_heteroclitus
ENSLAFG00000023096	-	98	78.974	ENSFHEG00000018979	pabpc1a	58	78.974	Fundulus_heteroclitus
ENSLAFG00000023096	-	98	78.462	ENSGMOG00000013448	pabpc1a	58	78.462	Gadus_morhua
ENSLAFG00000023096	-	98	78.974	ENSGMOG00000002448	-	59	78.974	Gadus_morhua
ENSLAFG00000023096	-	98	78.974	ENSGAFG00000010193	pabpc1b	60	78.974	Gambusia_affinis
ENSLAFG00000023096	-	98	78.974	ENSGAFG00000019750	pabpc1a	61	78.974	Gambusia_affinis
ENSLAFG00000023096	-	98	78.974	ENSGACG00000003572	pabpc1a	58	78.974	Gasterosteus_aculeatus
ENSLAFG00000023096	-	98	80.000	ENSGACG00000003771	pabpc1b	65	80.000	Gasterosteus_aculeatus
ENSLAFG00000023096	-	99	97.990	ENSGGOG00000038606	-	99	97.990	Gorilla_gorilla
ENSLAFG00000023096	-	99	97.990	ENSGGOG00000043933	-	99	97.990	Gorilla_gorilla
ENSLAFG00000023096	-	98	78.974	ENSHBUG00000020487	pabpc1a	68	77.778	Haplochromis_burtoni
ENSLAFG00000023096	-	98	77.436	ENSHBUG00000002075	pabpc1b	61	77.436	Haplochromis_burtoni
ENSLAFG00000023096	-	99	95.980	ENSHGLG00000019668	-	99	95.980	Heterocephalus_glaber_female
ENSLAFG00000023096	-	99	95.980	ENSHGLG00000019762	-	99	95.980	Heterocephalus_glaber_female
ENSLAFG00000023096	-	99	95.980	ENSHGLG00100020854	-	99	95.980	Heterocephalus_glaber_male
ENSLAFG00000023096	-	99	68.617	ENSHCOG00000003175	pabpc1b	69	67.337	Hippocampus_comes
ENSLAFG00000023096	-	98	78.974	ENSHCOG00000013502	pabpc1a	58	78.974	Hippocampus_comes
ENSLAFG00000023096	-	98	78.974	ENSIPUG00000010791	-	61	78.974	Ictalurus_punctatus
ENSLAFG00000023096	-	98	59.585	ENSIPUG00000021244	-	52	58.974	Ictalurus_punctatus
ENSLAFG00000023096	-	98	78.462	ENSIPUG00000008848	pabpc1a	59	78.462	Ictalurus_punctatus
ENSLAFG00000023096	-	99	96.985	ENSSTOG00000022096	-	99	96.985	Ictidomys_tridecemlineatus
ENSLAFG00000023096	-	99	96.985	ENSSTOG00000026028	-	99	96.985	Ictidomys_tridecemlineatus
ENSLAFG00000023096	-	99	94.975	ENSJJAG00000007037	-	99	94.975	Jaculus_jaculus
ENSLAFG00000023096	-	98	78.462	ENSKMAG00000008049	pabpc1b	64	78.462	Kryptolebias_marmoratus
ENSLAFG00000023096	-	98	78.974	ENSKMAG00000000605	pabpc1a	58	78.974	Kryptolebias_marmoratus
ENSLAFG00000023096	-	98	79.487	ENSLBEG00000026845	pabpc1b	59	79.487	Labrus_bergylta
ENSLAFG00000023096	-	98	78.974	ENSLBEG00000024002	-	58	78.974	Labrus_bergylta
ENSLAFG00000023096	-	99	97.500	ENSMFAG00000028878	-	99	97.500	Macaca_fascicularis
ENSLAFG00000023096	-	99	97.990	ENSMMUG00000037681	-	99	97.990	Macaca_mulatta
ENSLAFG00000023096	-	99	97.990	ENSMMUG00000039929	-	99	97.990	Macaca_mulatta
ENSLAFG00000023096	-	99	97.990	ENSMMUG00000009740	-	99	97.990	Macaca_mulatta
ENSLAFG00000023096	-	99	97.990	ENSMNEG00000037732	-	99	97.990	Macaca_nemestrina
ENSLAFG00000023096	-	99	97.990	ENSMLEG00000027495	-	99	97.990	Mandrillus_leucophaeus
ENSLAFG00000023096	-	98	78.462	ENSMAMG00000014610	pabpc1b	60	78.462	Mastacembelus_armatus
ENSLAFG00000023096	-	98	78.974	ENSMAMG00000004502	-	68	77.778	Mastacembelus_armatus
ENSLAFG00000023096	-	98	77.436	ENSMZEG00005026745	pabpc1b	59	77.436	Maylandia_zebra
ENSLAFG00000023096	-	98	78.974	ENSMZEG00005025416	pabpc1a	68	77.778	Maylandia_zebra
ENSLAFG00000023096	-	99	96.985	ENSMICG00000047642	-	99	96.985	Microcebus_murinus
ENSLAFG00000023096	-	98	78.974	ENSMMOG00000018044	pabpc1a	68	77.778	Mola_mola
ENSLAFG00000023096	-	98	79.487	ENSMMOG00000018009	pabpc1b	63	79.487	Mola_mola
ENSLAFG00000023096	-	98	67.347	ENSMODG00000015024	-	57	67.347	Monodelphis_domestica
ENSLAFG00000023096	-	98	72.821	ENSMODG00000013156	-	57	72.821	Monodelphis_domestica
ENSLAFG00000023096	-	98	78.462	ENSMALG00000006066	pabpc1b	64	78.462	Monopterus_albus
ENSLAFG00000023096	-	98	78.974	ENSMALG00000013020	-	62	78.974	Monopterus_albus
ENSLAFG00000023096	-	99	95.477	ENSNGAG00000012688	-	99	95.477	Nannospalax_galili
ENSLAFG00000023096	-	98	78.974	ENSNBRG00000003068	-	68	77.778	Neolamprologus_brichardi
ENSLAFG00000023096	-	98	77.436	ENSNBRG00000013737	pabpc1b	63	77.436	Neolamprologus_brichardi
ENSLAFG00000023096	-	99	97.990	ENSNLEG00000018128	-	99	97.990	Nomascus_leucogenys
ENSLAFG00000023096	-	99	95.477	ENSODEG00000018540	-	99	95.477	Octodon_degus
ENSLAFG00000023096	-	98	77.436	ENSONIG00000002717	pabpc1b	59	77.436	Oreochromis_niloticus
ENSLAFG00000023096	-	98	78.974	ENSONIG00000006871	-	58	78.974	Oreochromis_niloticus
ENSLAFG00000023096	-	99	97.487	ENSOCUG00000002565	-	99	97.487	Oryctolagus_cuniculus
ENSLAFG00000023096	-	98	76.923	ENSORLG00000003008	-	58	76.923	Oryzias_latipes
ENSLAFG00000023096	-	98	78.974	ENSORLG00000002691	pabpc1a	68	77.778	Oryzias_latipes
ENSLAFG00000023096	-	98	78.974	ENSORLG00020022398	pabpc1a	58	78.974	Oryzias_latipes_hni
ENSLAFG00000023096	-	98	76.923	ENSORLG00020022259	-	59	76.923	Oryzias_latipes_hni
ENSLAFG00000023096	-	98	76.923	ENSORLG00015010932	-	59	76.923	Oryzias_latipes_hsok
ENSLAFG00000023096	-	98	78.974	ENSORLG00015013633	pabpc1	58	78.974	Oryzias_latipes_hsok
ENSLAFG00000023096	-	98	78.974	ENSOMEG00000020219	pabpc1a	58	78.974	Oryzias_melastigma
ENSLAFG00000023096	-	98	76.111	ENSOMEG00000013627	pabpc1b	67	76.111	Oryzias_melastigma
ENSLAFG00000023096	-	99	96.985	ENSOGAG00000026047	-	99	96.985	Otolemur_garnettii
ENSLAFG00000023096	-	99	96.985	ENSOGAG00000029513	-	99	96.985	Otolemur_garnettii
ENSLAFG00000023096	-	99	96.985	ENSOARG00000005943	-	99	96.985	Ovis_aries
ENSLAFG00000023096	-	99	97.990	ENSPPAG00000012920	-	99	97.990	Pan_paniscus
ENSLAFG00000023096	-	99	97.487	ENSPPRG00000011804	-	99	97.487	Panthera_pardus
ENSLAFG00000023096	-	99	97.487	ENSPPRG00000011809	-	99	97.487	Panthera_pardus
ENSLAFG00000023096	-	99	97.990	ENSPTRG00000028252	-	99	97.990	Pan_troglodytes
ENSLAFG00000023096	-	99	97.990	ENSPANG00000011549	-	99	97.990	Papio_anubis
ENSLAFG00000023096	-	98	78.974	ENSPKIG00000005676	pabpc1b	59	78.974	Paramormyrops_kingsleyae
ENSLAFG00000023096	-	98	77.949	ENSPMGG00000022487	pabpc1a	77	77.949	Periophthalmus_magnuspinnatus
ENSLAFG00000023096	-	98	78.974	ENSPMGG00000023134	-	81	78.974	Periophthalmus_magnuspinnatus
ENSLAFG00000023096	-	98	78.974	ENSPFOG00000010815	pabpc1a	57	78.974	Poecilia_formosa
ENSLAFG00000023096	-	98	78.462	ENSPFOG00000005917	pabpc1b	58	78.462	Poecilia_formosa
ENSLAFG00000023096	-	98	78.974	ENSPLAG00000001388	pabpc1b	58	78.974	Poecilia_latipinna
ENSLAFG00000023096	-	98	78.974	ENSPLAG00000004114	pabpc1a	58	78.974	Poecilia_latipinna
ENSLAFG00000023096	-	98	78.974	ENSPMEG00000001334	pabpc1a	58	78.974	Poecilia_mexicana
ENSLAFG00000023096	-	98	78.462	ENSPMEG00000014399	pabpc1b	58	78.462	Poecilia_mexicana
ENSLAFG00000023096	-	98	78.974	ENSPREG00000010911	pabpc1b	60	78.974	Poecilia_reticulata
ENSLAFG00000023096	-	98	78.974	ENSPREG00000019595	pabpc1a	92	85.124	Poecilia_reticulata
ENSLAFG00000023096	-	99	97.990	ENSPPYG00000020468	-	99	97.990	Pongo_abelii
ENSLAFG00000023096	-	99	97.487	ENSPCAG00000005308	-	99	97.487	Procavia_capensis
ENSLAFG00000023096	-	99	96.482	ENSPCOG00000026349	-	99	96.482	Propithecus_coquereli
ENSLAFG00000023096	-	99	93.970	ENSPVAG00000016117	-	99	93.970	Pteropus_vampyrus
ENSLAFG00000023096	-	98	78.974	ENSPNYG00000005192	pabpc1a	61	77.778	Pundamilia_nyererei
ENSLAFG00000023096	-	98	77.436	ENSPNYG00000012578	pabpc1b	61	77.436	Pundamilia_nyererei
ENSLAFG00000023096	-	98	79.487	ENSPNAG00000024626	pabpc1b	58	79.487	Pygocentrus_nattereri
ENSLAFG00000023096	-	98	77.436	ENSPNAG00000028408	pabpc1a	65	77.436	Pygocentrus_nattereri
ENSLAFG00000023096	-	99	77.551	ENSRBIG00000028738	-	68	77.551	Rhinopithecus_bieti
ENSLAFG00000023096	-	99	97.990	ENSRBIG00000027173	-	99	97.990	Rhinopithecus_bieti
ENSLAFG00000023096	-	99	97.990	ENSRROG00000017404	-	99	97.990	Rhinopithecus_roxellana
ENSLAFG00000023096	-	98	68.718	ENSSHAG00000000511	-	59	68.718	Sarcophilus_harrisii
ENSLAFG00000023096	-	87	68.208	ENSSFOG00015019668	-	67	68.208	Scleropages_formosus
ENSLAFG00000023096	-	98	79.487	ENSSFOG00015002752	-	58	79.487	Scleropages_formosus
ENSLAFG00000023096	-	98	78.974	ENSSFOG00015006662	pabpc1a	59	78.974	Scleropages_formosus
ENSLAFG00000023096	-	98	78.462	ENSSMAG00000006869	pabpc1b	59	78.462	Scophthalmus_maximus
ENSLAFG00000023096	-	98	78.974	ENSSMAG00000010803	pabpc1a	58	78.974	Scophthalmus_maximus
ENSLAFG00000023096	-	98	78.974	ENSSDUG00000006675	pabpc1a	58	78.974	Seriola_dumerili
ENSLAFG00000023096	-	98	78.974	ENSSDUG00000011965	pabpc1b	59	78.974	Seriola_dumerili
ENSLAFG00000023096	-	98	78.974	ENSSLDG00000011661	pabpc1a	58	78.974	Seriola_lalandi_dorsalis
ENSLAFG00000023096	-	98	78.974	ENSSLDG00000014156	pabpc1b	60	78.974	Seriola_lalandi_dorsalis
ENSLAFG00000023096	-	98	78.974	ENSSPAG00000019265	pabpc1b	65	78.974	Stegastes_partitus
ENSLAFG00000023096	-	98	78.974	ENSSPAG00000014453	-	58	78.974	Stegastes_partitus
ENSLAFG00000023096	-	99	97.487	ENSSSCG00000036336	-	99	97.487	Sus_scrofa
ENSLAFG00000023096	-	99	97.487	ENSSSCG00000032167	-	99	97.487	Sus_scrofa
ENSLAFG00000023096	-	98	79.487	ENSTRUG00000003767	-	60	79.487	Takifugu_rubripes
ENSLAFG00000023096	-	98	78.974	ENSTRUG00000011577	-	58	78.974	Takifugu_rubripes
ENSLAFG00000023096	-	98	80.000	ENSTNIG00000009153	pabpc1b	59	80.000	Tetraodon_nigroviridis
ENSLAFG00000023096	-	98	74.627	ENSTNIG00000013307	pabpc1a	58	74.627	Tetraodon_nigroviridis
ENSLAFG00000023096	-	99	97.487	ENSTTRG00000013181	-	99	97.487	Tursiops_truncatus
ENSLAFG00000023096	-	99	97.487	ENSUAMG00000008089	-	99	97.487	Ursus_americanus
ENSLAFG00000023096	-	99	56.633	ENSUMAG00000023926	-	88	56.122	Ursus_maritimus
ENSLAFG00000023096	-	99	97.487	ENSUMAG00000003364	-	99	97.487	Ursus_maritimus
ENSLAFG00000023096	-	99	96.985	ENSVVUG00000015892	-	97	96.985	Vulpes_vulpes
ENSLAFG00000023096	-	98	78.974	ENSXCOG00000019901	pabpc1b	60	78.974	Xiphophorus_couchianus
ENSLAFG00000023096	-	98	78.974	ENSXCOG00000017066	pabpc1a	61	78.974	Xiphophorus_couchianus
ENSLAFG00000023096	-	98	78.974	ENSXMAG00000002555	pabpc1a	60	78.974	Xiphophorus_maculatus
ENSLAFG00000023096	-	98	78.974	ENSXMAG00000003753	pabpc1b	89	78.974	Xiphophorus_maculatus