EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000023150 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 6118 bases
Position: chrscaffold_34:3403289-3409406
Accession: 100668931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017545	SYF2	PF08231.12	3.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000023090	-	738	-	ENSLAFP00000017545	245 (aa)	XP_003415294	G3TPY2

Gene Model

Click here to download ENSLAFG00000023150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000023150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000023150	-	75	64.674	ENSLAFG00000030814	-	100	64.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000023150	-	100	92.653	ENSG00000117614	SYF2	100	92.653	Homo_sapiens
ENSLAFG00000023150	-	91	84.685	ENSAPOG00000001174	syf2	100	79.592	Acanthochromis_polyacanthus
ENSLAFG00000023150	-	80	94.872	ENSAMEG00000010134	-	100	94.872	Ailuropoda_melanoleuca
ENSLAFG00000023150	-	96	94.093	ENSAMEG00000010115	-	98	94.093	Ailuropoda_melanoleuca
ENSLAFG00000023150	-	96	79.149	ENSACIG00000023688	syf2	92	79.149	Amphilophus_citrinellus
ENSLAFG00000023150	-	94	83.550	ENSAOCG00000022046	syf2	97	83.550	Amphiprion_ocellaris
ENSLAFG00000023150	-	87	82.243	ENSAOCG00000010912	syf2	66	82.243	Amphiprion_ocellaris
ENSLAFG00000023150	-	94	83.550	ENSAPEG00000018858	syf2	88	83.550	Amphiprion_percula
ENSLAFG00000023150	-	89	83.410	ENSATEG00000007745	syf2	100	77.959	Anabas_testudineus
ENSLAFG00000023150	-	82	87.500	ENSAPLG00000016435	SYF2	99	87.500	Anas_platyrhynchos
ENSLAFG00000023150	-	68	75.449	ENSACAG00000026777	-	94	75.796	Anolis_carolinensis
ENSLAFG00000023150	-	83	85.294	ENSACAG00000013653	-	100	85.294	Anolis_carolinensis
ENSLAFG00000023150	-	100	91.837	ENSANAG00000032473	SYF2	100	92.245	Aotus_nancymaae
ENSLAFG00000023150	-	91	81.532	ENSACLG00000019916	syf2	100	76.327	Astatotilapia_calliptera
ENSLAFG00000023150	-	100	76.735	ENSAMXG00000004051	syf2	100	76.735	Astyanax_mexicanus
ENSLAFG00000023150	-	100	93.061	ENSBTAG00000001651	SYF2	100	94.068	Bos_taurus
ENSLAFG00000023150	-	85	52.381	WBGene00019402	syf-2	100	48.291	Caenorhabditis_elegans
ENSLAFG00000023150	-	100	92.245	ENSCJAG00000046570	SYF2	100	92.245	Callithrix_jacchus
ENSLAFG00000023150	-	96	84.681	ENSCAFG00000030331	-	99	84.681	Canis_familiaris
ENSLAFG00000023150	-	100	92.683	ENSCAFG00000012895	-	100	92.683	Canis_familiaris
ENSLAFG00000023150	-	100	92.683	ENSCAFG00020021091	-	100	92.683	Canis_lupus_dingo
ENSLAFG00000023150	-	74	87.363	ENSCAFG00020021094	-	83	95.513	Canis_lupus_dingo
ENSLAFG00000023150	-	100	92.653	ENSCHIG00000020874	SYF2	100	92.653	Capra_hircus
ENSLAFG00000023150	-	100	92.245	ENSTSYG00000005114	SYF2	100	92.245	Carlito_syrichta
ENSLAFG00000023150	-	81	96.970	ENSCAPG00000010006	SYF2	100	96.970	Cavia_aperea
ENSLAFG00000023150	-	100	91.837	ENSCPOG00000005326	SYF2	100	91.837	Cavia_porcellus
ENSLAFG00000023150	-	100	92.245	ENSCCAG00000022459	SYF2	100	92.653	Cebus_capucinus
ENSLAFG00000023150	-	100	91.837	ENSCATG00000026917	SYF2	100	91.837	Cercocebus_atys
ENSLAFG00000023150	-	100	93.469	ENSCLAG00000008474	SYF2	100	93.469	Chinchilla_lanigera
ENSLAFG00000023150	-	100	91.837	ENSCSAG00000000948	SYF2	100	91.837	Chlorocebus_sabaeus
ENSLAFG00000023150	-	74	80.663	ENSCHOG00000005273	-	100	80.663	Choloepus_hoffmanni
ENSLAFG00000023150	-	91	89.286	ENSCPBG00000025073	SYF2	93	87.446	Chrysemys_picta_bellii
ENSLAFG00000023150	-	86	53.052	ENSCING00000003017	-	89	52.582	Ciona_intestinalis
ENSLAFG00000023150	-	86	50.704	ENSCSAVG00000006627	-	97	50.704	Ciona_savignyi
ENSLAFG00000023150	-	100	79.184	ENSCANG00000037322	SYF2	100	79.184	Colobus_angolensis_palliatus
ENSLAFG00000023150	-	100	90.204	ENSCGRG00001020733	Syf2	100	90.204	Cricetulus_griseus_chok1gshd
ENSLAFG00000023150	-	80	94.898	ENSCGRG00000005095	Syf2	96	94.949	Cricetulus_griseus_crigri
ENSLAFG00000023150	-	89	78.440	ENSCSEG00000000117	syf2	93	77.928	Cynoglossus_semilaevis
ENSLAFG00000023150	-	91	81.081	ENSCVAG00000019543	syf2	100	76.327	Cyprinodon_variegatus
ENSLAFG00000023150	-	91	82.960	ENSDARG00000004706	syf2	94	82.960	Danio_rerio
ENSLAFG00000023150	-	100	96.735	ENSDNOG00000047605	SYF2	100	96.735	Dasypus_novemcinctus
ENSLAFG00000023150	-	100	93.061	ENSDORG00000001274	Syf2	100	93.061	Dipodomys_ordii
ENSLAFG00000023150	-	89	56.818	FBgn0033556	CG12343	97	56.818	Drosophila_melanogaster
ENSLAFG00000023150	-	91	79.279	ENSETEG00000015729	SYF2	100	78.355	Echinops_telfairi
ENSLAFG00000023150	-	80	59.898	ENSEBUG00000015402	syf2	95	59.898	Eptatretus_burgeri
ENSLAFG00000023150	-	100	92.653	ENSEASG00005004224	-	100	92.653	Equus_asinus_asinus
ENSLAFG00000023150	-	100	82.857	ENSEASG00005004232	-	100	82.857	Equus_asinus_asinus
ENSLAFG00000023150	-	97	94.515	ENSECAG00000010440	-	99	94.515	Equus_caballus
ENSLAFG00000023150	-	100	93.878	ENSECAG00000012023	-	100	93.878	Equus_caballus
ENSLAFG00000023150	-	75	81.522	ENSEEUG00000015084	SYF2	100	81.522	Erinaceus_europaeus
ENSLAFG00000023150	-	90	86.425	ENSELUG00000003465	syf2	93	86.425	Esox_lucius
ENSLAFG00000023150	-	100	91.870	ENSFCAG00000010324	-	85	91.870	Felis_catus
ENSLAFG00000023150	-	100	92.683	ENSFCAG00000043095	-	100	92.683	Felis_catus
ENSLAFG00000023150	-	83	83.824	ENSFALG00000000460	SYF2	99	76.955	Ficedula_albicollis
ENSLAFG00000023150	-	100	92.245	ENSFDAG00000008310	SYF2	100	92.245	Fukomys_damarensis
ENSLAFG00000023150	-	91	66.964	ENSFHEG00000007238	syf2	99	66.964	Fundulus_heteroclitus
ENSLAFG00000023150	-	89	84.404	ENSGMOG00000019138	syf2	97	84.404	Gadus_morhua
ENSLAFG00000023150	-	93	86.784	ENSGALG00000013639	SYF2	100	80.632	Gallus_gallus
ENSLAFG00000023150	-	94	77.922	ENSGAFG00000019435	syf2	96	77.922	Gambusia_affinis
ENSLAFG00000023150	-	91	81.982	ENSGACG00000007305	syf2	98	79.487	Gasterosteus_aculeatus
ENSLAFG00000023150	-	91	89.732	ENSGAGG00000010670	SYF2	93	87.879	Gopherus_agassizii
ENSLAFG00000023150	-	100	92.653	ENSGGOG00000012796	SYF2	100	92.653	Gorilla_gorilla
ENSLAFG00000023150	-	96	79.149	ENSHBUG00000020477	syf2	99	79.149	Haplochromis_burtoni
ENSLAFG00000023150	-	91	83.482	ENSHGLG00000004304	-	100	77.143	Heterocephalus_glaber_female
ENSLAFG00000023150	-	100	92.245	ENSHGLG00000014393	SYF2	100	92.245	Heterocephalus_glaber_female
ENSLAFG00000023150	-	100	92.245	ENSHGLG00100014722	SYF2	100	92.245	Heterocephalus_glaber_male
ENSLAFG00000023150	-	91	82.883	ENSHCOG00000012904	syf2	78	77.551	Hippocampus_comes
ENSLAFG00000023150	-	100	78.367	ENSIPUG00000019859	syf2	100	78.367	Ictalurus_punctatus
ENSLAFG00000023150	-	60	95.205	ENSSTOG00000023984	SYF2	100	95.205	Ictidomys_tridecemlineatus
ENSLAFG00000023150	-	81	95.980	ENSJJAG00000013301	Syf2	94	95.980	Jaculus_jaculus
ENSLAFG00000023150	-	100	76.735	ENSKMAG00000013856	syf2	100	76.735	Kryptolebias_marmoratus
ENSLAFG00000023150	-	89	83.562	ENSLBEG00000014425	syf2	100	77.959	Labrus_bergylta
ENSLAFG00000023150	-	96	82.051	ENSLACG00000012064	SYF2	92	86.697	Latimeria_chalumnae
ENSLAFG00000023150	-	99	78.926	ENSLOCG00000002728	syf2	94	78.926	Lepisosteus_oculatus
ENSLAFG00000023150	-	100	92.245	ENSMFAG00000041831	SYF2	100	92.245	Macaca_fascicularis
ENSLAFG00000023150	-	100	91.020	ENSMMUG00000002968	SYF2	100	91.837	Macaca_mulatta
ENSLAFG00000023150	-	100	92.245	ENSMNEG00000030180	SYF2	100	92.245	Macaca_nemestrina
ENSLAFG00000023150	-	100	91.837	ENSMLEG00000030248	SYF2	100	91.837	Mandrillus_leucophaeus
ENSLAFG00000023150	-	89	82.028	ENSMAMG00000010403	syf2	98	76.735	Mastacembelus_armatus
ENSLAFG00000023150	-	100	76.327	ENSMZEG00005006429	syf2	100	76.327	Maylandia_zebra
ENSLAFG00000023150	-	81	87.940	ENSMGAG00000002019	SYF2	100	87.940	Meleagris_gallopavo
ENSLAFG00000023150	-	100	90.612	ENSMAUG00000018974	Syf2	100	90.612	Mesocricetus_auratus
ENSLAFG00000023150	-	81	96.985	ENSMICG00000016191	SYF2	100	96.985	Microcebus_murinus
ENSLAFG00000023150	-	100	91.837	ENSMOCG00000022938	Syf2	100	91.837	Microtus_ochrogaster
ENSLAFG00000023150	-	96	77.872	ENSMMOG00000002396	syf2	97	77.872	Mola_mola
ENSLAFG00000023150	-	93	87.773	ENSMODG00000013951	-	100	87.773	Monodelphis_domestica
ENSLAFG00000023150	-	100	76.829	ENSMALG00000010706	syf2	100	77.236	Monopterus_albus
ENSLAFG00000023150	-	100	91.020	MGP_CAROLIEiJ_G0026633	Syf2	100	91.020	Mus_caroli
ENSLAFG00000023150	-	100	91.020	ENSMUSG00000028821	Syf2	100	91.020	Mus_musculus
ENSLAFG00000023150	-	100	91.020	MGP_PahariEiJ_G0028966	Syf2	100	91.020	Mus_pahari
ENSLAFG00000023150	-	100	91.020	MGP_SPRETEiJ_G0027613	Syf2	100	91.020	Mus_spretus
ENSLAFG00000023150	-	100	91.057	ENSMPUG00000015801	-	100	91.057	Mustela_putorius_furo
ENSLAFG00000023150	-	100	93.089	ENSMPUG00000015802	-	100	93.089	Mustela_putorius_furo
ENSLAFG00000023150	-	94	94.783	ENSMLUG00000001885	SYF2	94	94.783	Myotis_lucifugus
ENSLAFG00000023150	-	100	92.308	ENSNGAG00000007912	Syf2	100	92.308	Nannospalax_galili
ENSLAFG00000023150	-	100	69.512	ENSNBRG00000010720	syf2	94	74.236	Neolamprologus_brichardi
ENSLAFG00000023150	-	100	92.653	ENSNLEG00000035185	SYF2	100	92.653	Nomascus_leucogenys
ENSLAFG00000023150	-	100	91.020	ENSOPRG00000012870	SYF2	100	91.020	Ochotona_princeps
ENSLAFG00000023150	-	96	93.162	ENSODEG00000017664	-	98	93.162	Octodon_degus
ENSLAFG00000023150	-	100	82.449	ENSODEG00000014338	-	100	82.449	Octodon_degus
ENSLAFG00000023150	-	91	81.532	ENSONIG00000008213	syf2	100	76.327	Oreochromis_niloticus
ENSLAFG00000023150	-	82	90.099	ENSOANG00000009552	SYF2	100	90.099	Ornithorhynchus_anatinus
ENSLAFG00000023150	-	100	93.469	ENSOCUG00000013050	SYF2	100	93.469	Oryctolagus_cuniculus
ENSLAFG00000023150	-	91	81.982	ENSORLG00000028820	syf2	95	81.982	Oryzias_latipes
ENSLAFG00000023150	-	91	81.982	ENSORLG00020018333	syf2	94	81.982	Oryzias_latipes_hni
ENSLAFG00000023150	-	91	81.532	ENSORLG00015014665	syf2	93	81.532	Oryzias_latipes_hsok
ENSLAFG00000023150	-	97	79.253	ENSOMEG00000013911	syf2	99	79.253	Oryzias_melastigma
ENSLAFG00000023150	-	100	93.878	ENSOGAG00000009962	SYF2	100	93.878	Otolemur_garnettii
ENSLAFG00000023150	-	100	92.308	ENSOARG00000006348	-	100	92.308	Ovis_aries
ENSLAFG00000023150	-	80	66.154	ENSOARG00000006269	-	100	66.154	Ovis_aries
ENSLAFG00000023150	-	100	92.653	ENSPPAG00000036579	SYF2	100	92.653	Pan_paniscus
ENSLAFG00000023150	-	100	92.276	ENSPPRG00000001638	-	100	92.276	Panthera_pardus
ENSLAFG00000023150	-	100	92.683	ENSPPRG00000001651	-	100	92.683	Panthera_pardus
ENSLAFG00000023150	-	89	97.706	ENSPTIG00000005711	-	80	97.706	Panthera_tigris_altaica
ENSLAFG00000023150	-	100	92.683	ENSPTIG00000007036	-	100	92.683	Panthera_tigris_altaica
ENSLAFG00000023150	-	100	92.653	ENSPTRG00000000352	SYF2	100	92.653	Pan_troglodytes
ENSLAFG00000023150	-	100	92.245	ENSPANG00000008139	SYF2	100	92.245	Papio_anubis
ENSLAFG00000023150	-	100	78.367	ENSPKIG00000008130	syf2	100	78.367	Paramormyrops_kingsleyae
ENSLAFG00000023150	-	99	83.951	ENSPSIG00000011816	SYF2	94	83.951	Pelodiscus_sinensis
ENSLAFG00000023150	-	98	76.763	ENSPMGG00000008755	syf2	94	76.763	Periophthalmus_magnuspinnatus
ENSLAFG00000023150	-	100	91.429	ENSPEMG00000008283	Syf2	100	91.429	Peromyscus_maniculatus_bairdii
ENSLAFG00000023150	-	92	92.889	ENSPCIG00000014235	SYF2	100	87.600	Phascolarctos_cinereus
ENSLAFG00000023150	-	100	75.510	ENSPFOG00000004116	syf2	95	78.298	Poecilia_formosa
ENSLAFG00000023150	-	96	77.872	ENSPLAG00000006691	syf2	100	78.112	Poecilia_latipinna
ENSLAFG00000023150	-	96	75.319	ENSPMEG00000011684	syf2	98	75.758	Poecilia_mexicana
ENSLAFG00000023150	-	88	81.019	ENSPREG00000003009	syf2	97	77.872	Poecilia_reticulata
ENSLAFG00000023150	-	100	92.653	ENSPPYG00000001713	SYF2	100	92.653	Pongo_abelii
ENSLAFG00000023150	-	100	64.082	ENSPCOG00000027011	SYF2	100	63.673	Propithecus_coquereli
ENSLAFG00000023150	-	100	81.224	ENSPVAG00000005841	SYF2	100	81.224	Pteropus_vampyrus
ENSLAFG00000023150	-	91	81.532	ENSPNYG00000004979	syf2	95	80.349	Pundamilia_nyererei
ENSLAFG00000023150	-	100	78.776	ENSPNAG00000015570	syf2	100	78.776	Pygocentrus_nattereri
ENSLAFG00000023150	-	100	91.020	ENSRNOG00000060597	Syf2	100	91.020	Rattus_norvegicus
ENSLAFG00000023150	-	100	89.796	ENSRBIG00000042970	SYF2	100	89.796	Rhinopithecus_bieti
ENSLAFG00000023150	-	100	92.245	ENSRROG00000001347	SYF2	100	92.245	Rhinopithecus_roxellana
ENSLAFG00000023150	-	100	91.020	ENSSBOG00000020184	SYF2	100	91.429	Saimiri_boliviensis_boliviensis
ENSLAFG00000023150	-	100	85.542	ENSSHAG00000015630	-	100	85.542	Sarcophilus_harrisii
ENSLAFG00000023150	-	84	92.233	ENSSHAG00000007152	-	100	92.233	Sarcophilus_harrisii
ENSLAFG00000023150	-	100	77.959	ENSSFOG00015023647	syf2	100	77.959	Scleropages_formosus
ENSLAFG00000023150	-	100	76.327	ENSSMAG00000009867	syf2	100	76.327	Scophthalmus_maximus
ENSLAFG00000023150	-	89	83.486	ENSSDUG00000013072	syf2	99	77.686	Seriola_dumerili
ENSLAFG00000023150	-	89	83.486	ENSSLDG00000012677	syf2	97	79.237	Seriola_lalandi_dorsalis
ENSLAFG00000023150	-	100	73.469	ENSSARG00000012889	SYF2	100	73.469	Sorex_araneus
ENSLAFG00000023150	-	99	83.951	ENSSPUG00000005251	SYF2	96	83.951	Sphenodon_punctatus
ENSLAFG00000023150	-	91	83.333	ENSSPAG00000009626	syf2	93	83.333	Stegastes_partitus
ENSLAFG00000023150	-	100	93.061	ENSSSCG00000037481	SYF2	100	93.061	Sus_scrofa
ENSLAFG00000023150	-	61	58.278	ENSTGUG00000001126	SYF2	85	56.897	Taeniopygia_guttata
ENSLAFG00000023150	-	100	76.327	ENSTRUG00000001499	syf2	95	76.446	Takifugu_rubripes
ENSLAFG00000023150	-	91	79.372	ENSTNIG00000016912	syf2	100	79.372	Tetraodon_nigroviridis
ENSLAFG00000023150	-	100	70.612	ENSTBEG00000017370	SYF2	99	70.204	Tupaia_belangeri
ENSLAFG00000023150	-	100	93.469	ENSTTRG00000003550	SYF2	100	93.469	Tursiops_truncatus
ENSLAFG00000023150	-	100	92.276	ENSUAMG00000002897	SYF2	100	92.276	Ursus_americanus
ENSLAFG00000023150	-	100	92.683	ENSUMAG00000013108	SYF2	100	92.683	Ursus_maritimus
ENSLAFG00000023150	-	100	92.245	ENSVPAG00000005705	SYF2	100	92.245	Vicugna_pacos
ENSLAFG00000023150	-	100	89.113	ENSVVUG00000027181	-	100	89.113	Vulpes_vulpes
ENSLAFG00000023150	-	100	92.683	ENSVVUG00000027175	-	100	92.683	Vulpes_vulpes
ENSLAFG00000023150	-	93	85.088	ENSXETG00000022797	syf2	92	85.088	Xenopus_tropicalis
ENSLAFG00000023150	-	88	80.930	ENSXMAG00000022698	syf2	100	73.878	Xiphophorus_maculatus