EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000023191 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 20796 bases
Position: chrscaffold_12:44559091-44579886
Accession: 100662103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017514	PolyA_pol	PF01743.20	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000021969	TRNT1-201	1305	XM_003409990	ENSLAFP00000017514	434 (aa)	XP_003410038	G3TPW1

Gene Model

Click here to download ENSLAFG00000023191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000023191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000023191	TRNT1	100	94.009	ENSG00000072756	TRNT1	100	94.009	Homo_sapiens
ENSLAFG00000023191	TRNT1	99	66.667	ENSAPOG00000013687	trnt1	99	66.667	Acanthochromis_polyacanthus
ENSLAFG00000023191	TRNT1	100	91.972	ENSAMEG00000014520	TRNT1	100	91.972	Ailuropoda_melanoleuca
ENSLAFG00000023191	TRNT1	98	68.235	ENSACIG00000021706	trnt1	99	68.235	Amphilophus_citrinellus
ENSLAFG00000023191	TRNT1	98	67.529	ENSAOCG00000024612	trnt1	99	67.529	Amphiprion_ocellaris
ENSLAFG00000023191	TRNT1	97	59.857	ENSAPEG00000022627	trnt1	98	59.857	Amphiprion_percula
ENSLAFG00000023191	TRNT1	93	70.720	ENSATEG00000008928	trnt1	99	70.720	Anabas_testudineus
ENSLAFG00000023191	TRNT1	89	76.486	ENSAPLG00000004258	TRNT1	96	76.486	Anas_platyrhynchos
ENSLAFG00000023191	TRNT1	98	75.991	ENSACAG00000005657	TRNT1	98	75.991	Anolis_carolinensis
ENSLAFG00000023191	TRNT1	100	94.009	ENSANAG00000024802	TRNT1	100	94.009	Aotus_nancymaae
ENSLAFG00000023191	TRNT1	98	67.059	ENSACLG00000022227	trnt1	99	67.059	Astatotilapia_calliptera
ENSLAFG00000023191	TRNT1	99	68.140	ENSAMXG00000003960	trnt1	99	67.981	Astyanax_mexicanus
ENSLAFG00000023191	TRNT1	100	90.783	ENSBTAG00000019534	TRNT1	100	90.783	Bos_taurus
ENSLAFG00000023191	TRNT1	93	44.630	WBGene00010089	hpo-31	94	44.630	Caenorhabditis_elegans
ENSLAFG00000023191	TRNT1	100	94.009	ENSCJAG00000015466	TRNT1	100	94.009	Callithrix_jacchus
ENSLAFG00000023191	TRNT1	100	91.475	ENSCAFG00000005985	TRNT1	99	91.475	Canis_familiaris
ENSLAFG00000023191	TRNT1	100	91.475	ENSCAFG00020014746	TRNT1	99	91.475	Canis_lupus_dingo
ENSLAFG00000023191	TRNT1	100	90.783	ENSCHIG00000007030	TRNT1	99	90.783	Capra_hircus
ENSLAFG00000023191	TRNT1	100	95.161	ENSTSYG00000013390	TRNT1	100	95.161	Carlito_syrichta
ENSLAFG00000023191	TRNT1	87	73.810	ENSCAPG00000006891	TRNT1	100	73.810	Cavia_aperea
ENSLAFG00000023191	TRNT1	99	91.224	ENSCPOG00000007849	TRNT1	100	91.045	Cavia_porcellus
ENSLAFG00000023191	TRNT1	95	90.385	ENSCCAG00000002919	TRNT1	100	92.519	Cebus_capucinus
ENSLAFG00000023191	TRNT1	99	94.688	ENSCATG00000031985	TRNT1	99	94.688	Cercocebus_atys
ENSLAFG00000023191	TRNT1	99	92.379	ENSCLAG00000005186	TRNT1	99	92.379	Chinchilla_lanigera
ENSLAFG00000023191	TRNT1	100	94.931	ENSCSAG00000011052	TRNT1	100	94.931	Chlorocebus_sabaeus
ENSLAFG00000023191	TRNT1	85	92.574	ENSCHOG00000005712	TRNT1	85	92.574	Choloepus_hoffmanni
ENSLAFG00000023191	TRNT1	94	82.555	ENSCPBG00000017636	TRNT1	93	82.555	Chrysemys_picta_bellii
ENSLAFG00000023191	TRNT1	93	44.794	ENSCING00000007069	-	100	44.794	Ciona_intestinalis
ENSLAFG00000023191	TRNT1	97	44.941	ENSCSAVG00000007494	-	100	44.941	Ciona_savignyi
ENSLAFG00000023191	TRNT1	100	94.470	ENSCANG00000039030	TRNT1	100	94.470	Colobus_angolensis_palliatus
ENSLAFG00000023191	TRNT1	100	92.166	ENSCGRG00001009998	Trnt1	100	92.166	Cricetulus_griseus_chok1gshd
ENSLAFG00000023191	TRNT1	100	92.166	ENSCGRG00000013410	Trnt1	100	92.166	Cricetulus_griseus_crigri
ENSLAFG00000023191	TRNT1	98	67.294	ENSCSEG00000008157	trnt1	99	67.294	Cynoglossus_semilaevis
ENSLAFG00000023191	TRNT1	94	69.951	ENSCVAG00000019770	trnt1	96	69.951	Cyprinodon_variegatus
ENSLAFG00000023191	TRNT1	99	67.981	ENSDARG00000075297	trnt1	99	67.981	Danio_rerio
ENSLAFG00000023191	TRNT1	100	93.548	ENSDNOG00000008837	TRNT1	100	93.548	Dasypus_novemcinctus
ENSLAFG00000023191	TRNT1	100	89.631	ENSDORG00000014035	Trnt1	100	89.631	Dipodomys_ordii
ENSLAFG00000023191	TRNT1	92	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSLAFG00000023191	TRNT1	57	93.173	ENSETEG00000018177	TRNT1	100	93.173	Echinops_telfairi
ENSLAFG00000023191	TRNT1	93	62.035	ENSEBUG00000012779	-	95	62.035	Eptatretus_burgeri
ENSLAFG00000023191	TRNT1	100	93.548	ENSEASG00005003577	TRNT1	100	93.548	Equus_asinus_asinus
ENSLAFG00000023191	TRNT1	100	93.779	ENSECAG00000014420	TRNT1	100	93.779	Equus_caballus
ENSLAFG00000023191	TRNT1	100	89.401	ENSEEUG00000009567	TRNT1	100	89.401	Erinaceus_europaeus
ENSLAFG00000023191	TRNT1	99	67.824	ENSELUG00000003802	trnt1	99	67.824	Esox_lucius
ENSLAFG00000023191	TRNT1	100	91.705	ENSFCAG00000026805	TRNT1	99	91.705	Felis_catus
ENSLAFG00000023191	TRNT1	88	75.521	ENSFALG00000013539	TRNT1	99	75.521	Ficedula_albicollis
ENSLAFG00000023191	TRNT1	99	92.610	ENSFDAG00000018412	TRNT1	100	91.791	Fukomys_damarensis
ENSLAFG00000023191	TRNT1	96	67.612	ENSFHEG00000019294	trnt1	99	67.612	Fundulus_heteroclitus
ENSLAFG00000023191	TRNT1	93	67.901	ENSGMOG00000007460	trnt1	95	67.901	Gadus_morhua
ENSLAFG00000023191	TRNT1	93	75.802	ENSGALG00000017368	TRNT1	94	75.802	Gallus_gallus
ENSLAFG00000023191	TRNT1	94	69.704	ENSGAFG00000008647	trnt1	96	69.704	Gambusia_affinis
ENSLAFG00000023191	TRNT1	99	65.814	ENSGACG00000011903	trnt1	96	69.110	Gasterosteus_aculeatus
ENSLAFG00000023191	TRNT1	96	81.687	ENSGAGG00000020942	TRNT1	94	81.687	Gopherus_agassizii
ENSLAFG00000023191	TRNT1	100	94.240	ENSGGOG00000015286	TRNT1	100	94.240	Gorilla_gorilla
ENSLAFG00000023191	TRNT1	98	67.059	ENSHBUG00000002797	trnt1	99	67.059	Haplochromis_burtoni
ENSLAFG00000023191	TRNT1	99	91.224	ENSHGLG00000003649	TRNT1	99	91.224	Heterocephalus_glaber_female
ENSLAFG00000023191	TRNT1	99	86.636	ENSHGLG00000000221	-	99	86.636	Heterocephalus_glaber_female
ENSLAFG00000023191	TRNT1	99	90.069	ENSHGLG00100016421	TRNT1	99	90.069	Heterocephalus_glaber_male
ENSLAFG00000023191	TRNT1	94	68.473	ENSHCOG00000010618	trnt1	95	68.473	Hippocampus_comes
ENSLAFG00000023191	TRNT1	96	67.788	ENSIPUG00000000971	trnt1	97	67.788	Ictalurus_punctatus
ENSLAFG00000023191	TRNT1	100	88.249	ENSSTOG00000000150	TRNT1	98	94.059	Ictidomys_tridecemlineatus
ENSLAFG00000023191	TRNT1	100	92.627	ENSJJAG00000018561	Trnt1	99	92.627	Jaculus_jaculus
ENSLAFG00000023191	TRNT1	96	67.689	ENSKMAG00000011307	trnt1	99	67.689	Kryptolebias_marmoratus
ENSLAFG00000023191	TRNT1	94	63.415	ENSLBEG00000019457	trnt1	97	63.415	Labrus_bergylta
ENSLAFG00000023191	TRNT1	99	71.594	ENSLACG00000013227	TRNT1	99	71.594	Latimeria_chalumnae
ENSLAFG00000023191	TRNT1	99	69.213	ENSLOCG00000011105	trnt1	99	69.213	Lepisosteus_oculatus
ENSLAFG00000023191	TRNT1	99	94.919	ENSMFAG00000045113	TRNT1	99	94.919	Macaca_fascicularis
ENSLAFG00000023191	TRNT1	99	94.919	ENSMMUG00000017983	TRNT1	99	94.919	Macaca_mulatta
ENSLAFG00000023191	TRNT1	99	94.919	ENSMNEG00000037805	TRNT1	99	94.919	Macaca_nemestrina
ENSLAFG00000023191	TRNT1	88	95.812	ENSMLEG00000033671	TRNT1	99	95.812	Mandrillus_leucophaeus
ENSLAFG00000023191	TRNT1	98	68.235	ENSMAMG00000023401	trnt1	99	68.235	Mastacembelus_armatus
ENSLAFG00000023191	TRNT1	98	67.059	ENSMZEG00005009141	trnt1	99	67.059	Maylandia_zebra
ENSLAFG00000023191	TRNT1	74	75.312	ENSMGAG00000009971	TRNT1	99	75.312	Meleagris_gallopavo
ENSLAFG00000023191	TRNT1	100	91.935	ENSMAUG00000020707	Trnt1	100	91.935	Mesocricetus_auratus
ENSLAFG00000023191	TRNT1	100	94.240	ENSMICG00000016615	TRNT1	100	94.240	Microcebus_murinus
ENSLAFG00000023191	TRNT1	100	92.166	ENSMOCG00000004539	Trnt1	100	92.166	Microtus_ochrogaster
ENSLAFG00000023191	TRNT1	95	68.523	ENSMMOG00000010742	trnt1	97	68.523	Mola_mola
ENSLAFG00000023191	TRNT1	99	83.834	ENSMODG00000004368	TRNT1	99	83.834	Monodelphis_domestica
ENSLAFG00000023191	TRNT1	98	67.294	ENSMALG00000008376	trnt1	99	67.294	Monopterus_albus
ENSLAFG00000023191	TRNT1	100	92.396	MGP_CAROLIEiJ_G0028698	Trnt1	100	92.396	Mus_caroli
ENSLAFG00000023191	TRNT1	100	92.396	ENSMUSG00000013736	Trnt1	100	92.396	Mus_musculus
ENSLAFG00000023191	TRNT1	100	91.705	MGP_PahariEiJ_G0022449	Trnt1	100	92.611	Mus_pahari
ENSLAFG00000023191	TRNT1	100	92.396	MGP_SPRETEiJ_G0029726	Trnt1	100	92.396	Mus_spretus
ENSLAFG00000023191	TRNT1	100	92.166	ENSMPUG00000017017	TRNT1	99	92.166	Mustela_putorius_furo
ENSLAFG00000023191	TRNT1	89	88.083	ENSMLUG00000011864	TRNT1	100	88.083	Myotis_lucifugus
ENSLAFG00000023191	TRNT1	99	92.148	ENSNGAG00000000537	Trnt1	99	92.148	Nannospalax_galili
ENSLAFG00000023191	TRNT1	79	66.667	ENSNBRG00000023606	trnt1	99	66.667	Neolamprologus_brichardi
ENSLAFG00000023191	TRNT1	100	95.161	ENSNLEG00000003226	TRNT1	100	95.161	Nomascus_leucogenys
ENSLAFG00000023191	TRNT1	99	84.296	ENSMEUG00000004684	TRNT1	99	84.296	Notamacropus_eugenii
ENSLAFG00000023191	TRNT1	88	80.418	ENSOPRG00000015067	TRNT1	99	80.418	Ochotona_princeps
ENSLAFG00000023191	TRNT1	99	92.379	ENSODEG00000007597	TRNT1	99	92.379	Octodon_degus
ENSLAFG00000023191	TRNT1	98	67.529	ENSONIG00000020273	trnt1	98	67.529	Oreochromis_niloticus
ENSLAFG00000023191	TRNT1	99	76.620	ENSOANG00000007514	TRNT1	99	76.620	Ornithorhynchus_anatinus
ENSLAFG00000023191	TRNT1	100	84.562	ENSOCUG00000008580	TRNT1	99	84.562	Oryctolagus_cuniculus
ENSLAFG00000023191	TRNT1	97	66.190	ENSORLG00000003165	trnt1	99	66.190	Oryzias_latipes
ENSLAFG00000023191	TRNT1	97	66.190	ENSORLG00020022060	trnt1	99	66.190	Oryzias_latipes_hni
ENSLAFG00000023191	TRNT1	96	64.858	ENSORLG00015018915	trnt1	99	64.858	Oryzias_latipes_hsok
ENSLAFG00000023191	TRNT1	95	65.534	ENSOMEG00000003331	trnt1	97	65.534	Oryzias_melastigma
ENSLAFG00000023191	TRNT1	100	90.553	ENSOARG00000008631	TRNT1	99	90.553	Ovis_aries
ENSLAFG00000023191	TRNT1	100	94.240	ENSPPAG00000043566	TRNT1	100	94.240	Pan_paniscus
ENSLAFG00000023191	TRNT1	99	91.917	ENSPPRG00000001327	TRNT1	99	91.917	Panthera_pardus
ENSLAFG00000023191	TRNT1	100	91.705	ENSPTIG00000011448	TRNT1	99	91.705	Panthera_tigris_altaica
ENSLAFG00000023191	TRNT1	100	94.240	ENSPTRG00000014564	TRNT1	100	94.240	Pan_troglodytes
ENSLAFG00000023191	TRNT1	99	94.688	ENSPANG00000025944	TRNT1	99	94.688	Papio_anubis
ENSLAFG00000023191	TRNT1	98	68.852	ENSPKIG00000020015	trnt1	98	68.852	Paramormyrops_kingsleyae
ENSLAFG00000023191	TRNT1	91	81.108	ENSPSIG00000017356	TRNT1	99	83.056	Pelodiscus_sinensis
ENSLAFG00000023191	TRNT1	98	66.118	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSLAFG00000023191	TRNT1	100	92.627	ENSPEMG00000019845	Trnt1	100	92.627	Peromyscus_maniculatus_bairdii
ENSLAFG00000023191	TRNT1	99	84.065	ENSPCIG00000030436	TRNT1	99	84.065	Phascolarctos_cinereus
ENSLAFG00000023191	TRNT1	94	69.212	ENSPFOG00000006194	trnt1	95	69.212	Poecilia_formosa
ENSLAFG00000023191	TRNT1	94	69.212	ENSPLAG00000015623	trnt1	99	68.983	Poecilia_latipinna
ENSLAFG00000023191	TRNT1	94	69.212	ENSPMEG00000012216	trnt1	99	68.983	Poecilia_mexicana
ENSLAFG00000023191	TRNT1	94	68.537	ENSPREG00000021470	trnt1	96	68.537	Poecilia_reticulata
ENSLAFG00000023191	TRNT1	100	94.470	ENSPPYG00000013702	TRNT1	100	94.470	Pongo_abelii
ENSLAFG00000023191	TRNT1	88	95.039	ENSPCAG00000001951	TRNT1	100	95.039	Procavia_capensis
ENSLAFG00000023191	TRNT1	100	94.931	ENSPCOG00000022228	TRNT1	100	94.931	Propithecus_coquereli
ENSLAFG00000023191	TRNT1	88	92.708	ENSPVAG00000008784	TRNT1	100	92.708	Pteropus_vampyrus
ENSLAFG00000023191	TRNT1	98	67.059	ENSPNYG00000003120	trnt1	99	67.059	Pundamilia_nyererei
ENSLAFG00000023191	TRNT1	99	67.053	ENSPNAG00000000565	trnt1	99	67.053	Pygocentrus_nattereri
ENSLAFG00000023191	TRNT1	100	92.396	ENSRNOG00000006432	Trnt1	100	92.396	Rattus_norvegicus
ENSLAFG00000023191	TRNT1	100	92.166	ENSRBIG00000042632	TRNT1	100	92.166	Rhinopithecus_bieti
ENSLAFG00000023191	TRNT1	100	94.240	ENSRROG00000036866	TRNT1	100	94.240	Rhinopithecus_roxellana
ENSLAFG00000023191	TRNT1	100	94.009	ENSSBOG00000021208	TRNT1	100	94.009	Saimiri_boliviensis_boliviensis
ENSLAFG00000023191	TRNT1	99	83.372	ENSSHAG00000018861	TRNT1	99	83.372	Sarcophilus_harrisii
ENSLAFG00000023191	TRNT1	93	71.111	ENSSFOG00015020844	trnt1	94	71.111	Scleropages_formosus
ENSLAFG00000023191	TRNT1	98	67.294	ENSSMAG00000015432	trnt1	97	67.294	Scophthalmus_maximus
ENSLAFG00000023191	TRNT1	98	67.529	ENSSDUG00000012320	trnt1	99	67.529	Seriola_dumerili
ENSLAFG00000023191	TRNT1	56	65.560	ENSSLDG00000016463	-	91	65.690	Seriola_lalandi_dorsalis
ENSLAFG00000023191	TRNT1	98	67.529	ENSSLDG00000009325	trnt1	99	67.529	Seriola_lalandi_dorsalis
ENSLAFG00000023191	TRNT1	88	81.984	ENSSPUG00000014153	TRNT1	99	81.984	Sphenodon_punctatus
ENSLAFG00000023191	TRNT1	98	66.824	ENSSPAG00000021005	trnt1	99	66.824	Stegastes_partitus
ENSLAFG00000023191	TRNT1	100	93.318	ENSSSCG00000011529	TRNT1	100	93.318	Sus_scrofa
ENSLAFG00000023191	TRNT1	93	76.049	ENSTGUG00000010192	TRNT1	99	76.049	Taeniopygia_guttata
ENSLAFG00000023191	TRNT1	98	67.765	ENSTRUG00000001088	trnt1	99	67.765	Takifugu_rubripes
ENSLAFG00000023191	TRNT1	99	66.589	ENSTNIG00000007363	trnt1	99	66.589	Tetraodon_nigroviridis
ENSLAFG00000023191	TRNT1	70	81.081	ENSTBEG00000006367	TRNT1	100	81.081	Tupaia_belangeri
ENSLAFG00000023191	TRNT1	100	91.014	ENSTTRG00000007803	TRNT1	100	91.014	Tursiops_truncatus
ENSLAFG00000023191	TRNT1	100	91.705	ENSUAMG00000022574	TRNT1	99	91.705	Ursus_americanus
ENSLAFG00000023191	TRNT1	100	91.935	ENSUMAG00000024092	TRNT1	99	91.935	Ursus_maritimus
ENSLAFG00000023191	TRNT1	100	91.705	ENSVVUG00000012810	TRNT1	99	91.705	Vulpes_vulpes
ENSLAFG00000023191	TRNT1	98	63.636	ENSXETG00000025091	trnt1	99	65.672	Xenopus_tropicalis
ENSLAFG00000023191	TRNT1	94	69.458	ENSXCOG00000010150	trnt1	96	69.458	Xiphophorus_couchianus
ENSLAFG00000023191	TRNT1	94	68.966	ENSXMAG00000002227	trnt1	96	68.966	Xiphophorus_maculatus