EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000025161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C oocyte form
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 3038 bases
Position: chrscaffold_35:3170837-3173874
Accession: 100670451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024817	GTP_EFTU	PF00009.27	1.8e-53	1	1
ENSLAFP00000024817	GTP_EFTU_D2	PF03144.25	2.3e-14	1	1
ENSLAFP00000024817	GTP_EFTU_D3	PF03143.17	3.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000023873	-	1386	-	ENSLAFP00000024817	461 (aa)	XP_003415685	G3UAF9

Gene Model

Click here to download ENSLAFG00000025161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000025161	-	99	68.913	ENSLAFG00000028231	-	99	68.913
ENSLAFG00000025161	-	93	88.056	ENSLAFG00000004005	EEF1A2	100	88.056
ENSLAFG00000025161	-	99	71.739	ENSLAFG00000006909	-	99	71.739
ENSLAFG00000025161	-	99	78.261	ENSLAFG00000031338	-	99	78.261
ENSLAFG00000025161	-	99	85.652	ENSLAFG00000025700	-	99	85.652
ENSLAFG00000025161	-	89	73.171	ENSLAFG00000027371	-	100	73.171
ENSLAFG00000025161	-	99	85.435	ENSLAFG00000030680	-	99	85.435
ENSLAFG00000025161	-	99	84.314	ENSLAFG00000030577	-	99	84.314
ENSLAFG00000025161	-	95	37.330	ENSLAFG00000002545	GSPT2	68	37.330
ENSLAFG00000025161	-	99	75.817	ENSLAFG00000031363	-	99	75.817
ENSLAFG00000025161	-	96	37.923	ENSLAFG00000032278	GSPT1	72	37.838
ENSLAFG00000025161	-	95	38.902	ENSLAFG00000007835	HBS1L	62	38.902
ENSLAFG00000025161	-	100	86.985	ENSLAFG00000028081	-	99	86.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025161	-	67	83.062	ENSAPOG00000004757	eef1a1l1	99	100.000	Acanthochromis_polyacanthus
ENSLAFG00000025161	-	100	85.900	ENSAMEG00000009677	-	100	85.900	Ailuropoda_melanoleuca
ENSLAFG00000025161	-	100	83.948	ENSAMEG00000004317	-	100	83.948	Ailuropoda_melanoleuca
ENSLAFG00000025161	-	100	86.117	ENSCAFG00000013249	-	100	86.117	Canis_familiaris
ENSLAFG00000025161	-	100	86.117	ENSCAFG00020020007	-	100	86.117	Canis_lupus_dingo
ENSLAFG00000025161	-	100	90.022	ENSCPBG00000000748	-	100	90.022	Chrysemys_picta_bellii
ENSLAFG00000025161	-	100	89.154	ENSCPBG00000000646	-	100	89.154	Chrysemys_picta_bellii
ENSLAFG00000025161	-	99	89.130	ENSDARG00000020850	eef1a1l1	99	89.130	Danio_rerio
ENSLAFG00000025161	-	85	89.594	ENSEASG00005018013	-	99	89.594	Equus_asinus_asinus
ENSLAFG00000025161	-	98	94.493	ENSEASG00005012365	-	99	92.732	Equus_asinus_asinus
ENSLAFG00000025161	-	100	92.625	ENSECAG00000022260	-	100	92.625	Equus_caballus
ENSLAFG00000025161	-	100	88.069	ENSELUG00000023536	eef1a1l1	100	88.069	Esox_lucius
ENSLAFG00000025161	-	100	93.926	ENSFCAG00000030530	-	100	93.926	Felis_catus
ENSLAFG00000025161	-	100	90.239	ENSGAGG00000000642	-	100	90.239	Gopherus_agassizii
ENSLAFG00000025161	-	100	89.371	ENSGAGG00000000648	-	100	89.371	Gopherus_agassizii
ENSLAFG00000025161	-	90	85.714	ENSLBEG00000002790	eef1a1l1	99	85.714	Labrus_bergylta
ENSLAFG00000025161	-	75	92.486	ENSOANG00000012066	-	100	92.486	Ornithorhynchus_anatinus
ENSLAFG00000025161	-	90	86.199	ENSOMEG00000006888	-	99	86.199	Oryzias_melastigma
ENSLAFG00000025161	-	100	93.275	ENSOARG00000002943	-	100	93.275	Ovis_aries
ENSLAFG00000025161	-	99	92.982	ENSPPRG00000005678	-	98	92.982	Panthera_pardus
ENSLAFG00000025161	-	100	85.466	ENSPPRG00000008525	-	100	85.466	Panthera_pardus
ENSLAFG00000025161	-	100	87.419	ENSPTIG00000006939	-	100	87.419	Panthera_tigris_altaica
ENSLAFG00000025161	-	100	88.937	ENSPSIG00000008610	-	100	88.937	Pelodiscus_sinensis
ENSLAFG00000025161	-	66	99.074	ENSPVAG00000007682	-	65	99.074	Pteropus_vampyrus
ENSLAFG00000025161	-	100	80.911	ENSSMAG00000018455	-	99	80.911	Scophthalmus_maximus
ENSLAFG00000025161	-	100	88.503	ENSSPUG00000003655	-	100	88.503	Sphenodon_punctatus
ENSLAFG00000025161	-	100	93.709	ENSSSCG00000034113	-	100	93.709	Sus_scrofa
ENSLAFG00000025161	-	98	83.186	ENSSSCG00000038035	-	100	82.863	Sus_scrofa
ENSLAFG00000025161	-	100	82.430	ENSUAMG00000007676	-	100	82.430	Ursus_americanus
ENSLAFG00000025161	-	50	81.659	ENSUAMG00000006085	-	96	81.659	Ursus_americanus
ENSLAFG00000025161	-	100	84.165	ENSUAMG00000008928	-	100	84.165	Ursus_americanus
ENSLAFG00000025161	-	100	85.900	ENSUMAG00000013211	-	100	85.900	Ursus_maritimus
ENSLAFG00000025161	-	100	85.900	ENSVVUG00000026886	-	100	85.900	Vulpes_vulpes
ENSLAFG00000025161	-	100	88.503	ENSXETG00000022604	eef1a1o	100	88.503	Xenopus_tropicalis