EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000025743 (Gene tree)
Gene ID: -
Gene Symbol: SRSF1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1657 bases
Position: chrscaffold_31:10876177-10877833
Accession: 100660791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022405	RRM_1	PF00076.22	9.4e-34	1	2
ENSLAFP00000022405	RRM_1	PF00076.22	9.4e-34	2	2
ENSLAFP00000027940	RRM_1	PF00076.22	1.2e-33	1	2
ENSLAFP00000027940	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033324	SRSF1-201	699	-	ENSLAFP00000022405	232 (aa)	-	G3U3J7
ENSLAFT00000025419	SRSF1-202	744	-	ENSLAFP00000027940	248 (aa)	XP_003414647	G3UJD2

Gene Model

Click here to download ENSLAFG00000025743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000025743	SRSF1	65	46.386	ENSLAFG00000005260	SRSF5	59	46.108
ENSLAFG00000025743	SRSF1	55	73.333	ENSLAFG00000006381	SRSF9	77	74.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025743	SRSF1	100	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSLAFG00000025743	SRSF1	78	91.710	ENSAPOG00000002748	-	78	89.119	Acanthochromis_polyacanthus
ENSLAFG00000025743	SRSF1	79	91.133	ENSAPOG00000008542	-	80	92.021	Acanthochromis_polyacanthus
ENSLAFG00000025743	SRSF1	100	97.177	ENSAMEG00000002635	SRSF1	100	97.177	Ailuropoda_melanoleuca
ENSLAFG00000025743	SRSF1	78	91.710	ENSACIG00000008091	srsf1a	83	89.637	Amphilophus_citrinellus
ENSLAFG00000025743	SRSF1	79	91.133	ENSAOCG00000000337	-	82	89.655	Amphiprion_ocellaris
ENSLAFG00000025743	SRSF1	78	92.228	ENSAOCG00000010671	-	83	90.155	Amphiprion_ocellaris
ENSLAFG00000025743	SRSF1	78	92.228	ENSAPEG00000009915	-	83	90.155	Amphiprion_percula
ENSLAFG00000025743	SRSF1	79	91.133	ENSAPEG00000023352	-	81	89.655	Amphiprion_percula
ENSLAFG00000025743	SRSF1	78	92.228	ENSATEG00000022403	-	77	90.155	Anabas_testudineus
ENSLAFG00000025743	SRSF1	82	87.192	ENSATEG00000021567	-	81	88.325	Anabas_testudineus
ENSLAFG00000025743	SRSF1	100	98.387	ENSACAG00000005542	-	100	98.387	Anolis_carolinensis
ENSLAFG00000025743	SRSF1	99	100.000	ENSANAG00000020583	-	99	98.611	Aotus_nancymaae
ENSLAFG00000025743	SRSF1	81	73.500	ENSANAG00000025417	-	75	75.138	Aotus_nancymaae
ENSLAFG00000025743	SRSF1	94	91.632	ENSAMXG00000035996	srsf1a	79	92.965	Astyanax_mexicanus
ENSLAFG00000025743	SRSF1	54	78.065	ENSAMXG00000024373	-	72	76.282	Astyanax_mexicanus
ENSLAFG00000025743	SRSF1	100	100.000	ENSBTAG00000014766	SRSF1	100	100.000	Bos_taurus
ENSLAFG00000025743	SRSF1	79	91.837	ENSCJAG00000008111	-	88	91.371	Callithrix_jacchus
ENSLAFG00000025743	SRSF1	99	100.000	ENSCJAG00000041713	-	99	98.611	Callithrix_jacchus
ENSLAFG00000025743	SRSF1	99	100.000	ENSCAFG00000017430	SRSF1	97	100.000	Canis_familiaris
ENSLAFG00000025743	SRSF1	99	100.000	ENSCAFG00020025632	-	97	100.000	Canis_lupus_dingo
ENSLAFG00000025743	SRSF1	100	100.000	ENSCHIG00000010787	SRSF1	100	100.000	Capra_hircus
ENSLAFG00000025743	SRSF1	99	100.000	ENSTSYG00000013899	-	99	98.611	Carlito_syrichta
ENSLAFG00000025743	SRSF1	100	100.000	ENSCPOG00000032681	-	100	100.000	Cavia_porcellus
ENSLAFG00000025743	SRSF1	100	100.000	ENSCCAG00000029484	-	100	100.000	Cebus_capucinus
ENSLAFG00000025743	SRSF1	99	100.000	ENSCATG00000042294	-	99	98.611	Cercocebus_atys
ENSLAFG00000025743	SRSF1	100	100.000	ENSCLAG00000014707	-	100	100.000	Chinchilla_lanigera
ENSLAFG00000025743	SRSF1	99	99.187	ENSCSAG00000005642	-	97	99.187	Chlorocebus_sabaeus
ENSLAFG00000025743	SRSF1	100	100.000	ENSCHOG00000001899	SRSF1	100	100.000	Choloepus_hoffmanni
ENSLAFG00000025743	SRSF1	100	98.790	ENSCPBG00000009851	-	100	98.790	Chrysemys_picta_bellii
ENSLAFG00000025743	SRSF1	99	100.000	ENSCANG00000029726	-	99	98.611	Colobus_angolensis_palliatus
ENSLAFG00000025743	SRSF1	99	100.000	ENSCGRG00001000670	Srsf1	97	100.000	Cricetulus_griseus_chok1gshd
ENSLAFG00000025743	SRSF1	100	100.000	ENSCGRG00000005590	Srsf1	100	100.000	Cricetulus_griseus_crigri
ENSLAFG00000025743	SRSF1	78	91.327	ENSCSEG00000014272	-	81	90.270	Cynoglossus_semilaevis
ENSLAFG00000025743	SRSF1	79	83.962	ENSCSEG00000009973	-	81	83.019	Cynoglossus_semilaevis
ENSLAFG00000025743	SRSF1	78	89.744	ENSCVAG00000005458	-	91	89.617	Cyprinodon_variegatus
ENSLAFG00000025743	SRSF1	78	92.228	ENSCVAG00000018617	-	78	90.155	Cyprinodon_variegatus
ENSLAFG00000025743	SRSF1	99	96.735	ENSDARG00000017843	srsf1b	99	96.735	Danio_rerio
ENSLAFG00000025743	SRSF1	78	89.706	ENSDARG00000057691	srsf1a	99	87.958	Danio_rerio
ENSLAFG00000025743	SRSF1	99	100.000	ENSDNOG00000011737	-	97	100.000	Dasypus_novemcinctus
ENSLAFG00000025743	SRSF1	100	100.000	ENSDORG00000015082	Srsf1	100	100.000	Dipodomys_ordii
ENSLAFG00000025743	SRSF1	74	98.913	ENSETEG00000005349	-	63	98.913	Echinops_telfairi
ENSLAFG00000025743	SRSF1	99	100.000	ENSEASG00005002922	-	97	100.000	Equus_asinus_asinus
ENSLAFG00000025743	SRSF1	100	100.000	ENSECAG00000016654	SRSF1	100	100.000	Equus_caballus
ENSLAFG00000025743	SRSF1	74	100.000	ENSEEUG00000009255	-	63	100.000	Erinaceus_europaeus
ENSLAFG00000025743	SRSF1	78	93.299	ENSELUG00000021646	srsf1a	77	89.691	Esox_lucius
ENSLAFG00000025743	SRSF1	99	100.000	ENSFCAG00000002250	-	97	100.000	Felis_catus
ENSLAFG00000025743	SRSF1	99	81.707	ENSFALG00000005062	-	97	81.707	Ficedula_albicollis
ENSLAFG00000025743	SRSF1	100	100.000	ENSFDAG00000010646	-	100	100.000	Fukomys_damarensis
ENSLAFG00000025743	SRSF1	78	92.228	ENSFHEG00000003174	srsf1a	83	90.155	Fundulus_heteroclitus
ENSLAFG00000025743	SRSF1	91	86.818	ENSGMOG00000014787	-	80	89.730	Gadus_morhua
ENSLAFG00000025743	SRSF1	100	98.790	ENSGALG00000005525	SRSF1	100	98.790	Gallus_gallus
ENSLAFG00000025743	SRSF1	79	86.802	ENSGACG00000020621	srsf1b	80	87.302	Gasterosteus_aculeatus
ENSLAFG00000025743	SRSF1	99	98.780	ENSGAGG00000022965	-	97	98.780	Gopherus_agassizii
ENSLAFG00000025743	SRSF1	99	100.000	ENSGGOG00000004386	SRSF1	99	98.611	Gorilla_gorilla
ENSLAFG00000025743	SRSF1	78	91.710	ENSHBUG00000016788	srsf1a	80	89.637	Haplochromis_burtoni
ENSLAFG00000025743	SRSF1	87	100.000	ENSHGLG00000000600	-	100	100.000	Heterocephalus_glaber_female
ENSLAFG00000025743	SRSF1	87	100.000	ENSHGLG00000000669	-	100	100.000	Heterocephalus_glaber_female
ENSLAFG00000025743	SRSF1	100	100.000	ENSHGLG00100016906	-	100	100.000	Heterocephalus_glaber_male
ENSLAFG00000025743	SRSF1	78	87.310	ENSHCOG00000018918	srsf1a	77	87.817	Hippocampus_comes
ENSLAFG00000025743	SRSF1	94	91.213	ENSIPUG00000017039	srsf1a	79	93.467	Ictalurus_punctatus
ENSLAFG00000025743	SRSF1	100	95.968	ENSIPUG00000008750	srsf1b	100	95.968	Ictalurus_punctatus
ENSLAFG00000025743	SRSF1	100	100.000	ENSSTOG00000000243	-	100	100.000	Ictidomys_tridecemlineatus
ENSLAFG00000025743	SRSF1	51	92.126	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSLAFG00000025743	SRSF1	100	100.000	ENSJJAG00000000102	-	100	100.000	Jaculus_jaculus
ENSLAFG00000025743	SRSF1	78	92.228	ENSKMAG00000019232	srsf1a	78	88.601	Kryptolebias_marmoratus
ENSLAFG00000025743	SRSF1	78	91.192	ENSLBEG00000020864	-	83	89.119	Labrus_bergylta
ENSLAFG00000025743	SRSF1	79	84.500	ENSLBEG00000015294	-	80	85.500	Labrus_bergylta
ENSLAFG00000025743	SRSF1	99	90.984	ENSLACG00000014160	srsf1a	92	90.984	Latimeria_chalumnae
ENSLAFG00000025743	SRSF1	100	97.177	ENSLOCG00000005994	srsf1a	100	97.177	Lepisosteus_oculatus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMFAG00000040003	-	100	100.000	Macaca_fascicularis
ENSLAFG00000025743	SRSF1	99	97.154	ENSMMUG00000003260	-	97	97.154	Macaca_mulatta
ENSLAFG00000025743	SRSF1	99	100.000	ENSMMUG00000004725	SRSF1	99	98.611	Macaca_mulatta
ENSLAFG00000025743	SRSF1	99	96.748	ENSMNEG00000015983	-	97	96.748	Macaca_nemestrina
ENSLAFG00000025743	SRSF1	99	100.000	ENSMNEG00000027680	-	99	98.611	Macaca_nemestrina
ENSLAFG00000025743	SRSF1	99	94.309	ENSMLEG00000015243	-	97	94.309	Mandrillus_leucophaeus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMLEG00000040509	SRSF1	100	100.000	Mandrillus_leucophaeus
ENSLAFG00000025743	SRSF1	79	94.924	ENSMAMG00000019691	-	81	91.878	Mastacembelus_armatus
ENSLAFG00000025743	SRSF1	78	92.228	ENSMAMG00000018454	-	78	90.155	Mastacembelus_armatus
ENSLAFG00000025743	SRSF1	79	90.355	ENSMAMG00000019687	-	80	90.052	Mastacembelus_armatus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMAUG00000021845	Srsf1	100	100.000	Mesocricetus_auratus
ENSLAFG00000025743	SRSF1	99	100.000	ENSMICG00000013639	-	99	98.611	Microcebus_murinus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMOCG00000001996	Srsf1	100	100.000	Microtus_ochrogaster
ENSLAFG00000025743	SRSF1	78	90.674	ENSMMOG00000014354	srsf1a	83	88.601	Mola_mola
ENSLAFG00000025743	SRSF1	74	98.919	ENSMODG00000014781	-	63	98.919	Monodelphis_domestica
ENSLAFG00000025743	SRSF1	81	84.574	ENSMALG00000007763	-	79	86.339	Monopterus_albus
ENSLAFG00000025743	SRSF1	78	91.710	ENSMALG00000017129	-	75	88.601	Monopterus_albus
ENSLAFG00000025743	SRSF1	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	100	100.000	Mus_caroli
ENSLAFG00000025743	SRSF1	100	100.000	ENSMUSG00000018379	Srsf1	100	100.000	Mus_musculus
ENSLAFG00000025743	SRSF1	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	100	100.000	Mus_pahari
ENSLAFG00000025743	SRSF1	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	100	100.000	Mus_spretus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMPUG00000015369	SRSF1	100	100.000	Mustela_putorius_furo
ENSLAFG00000025743	SRSF1	82	90.640	ENSMLUG00000023995	-	79	90.052	Myotis_lucifugus
ENSLAFG00000025743	SRSF1	100	100.000	ENSMLUG00000011040	SRSF1	100	100.000	Myotis_lucifugus
ENSLAFG00000025743	SRSF1	100	100.000	ENSNGAG00000011395	Srsf1	100	100.000	Nannospalax_galili
ENSLAFG00000025743	SRSF1	100	80.085	ENSNBRG00000008041	srsf1b	80	84.324	Neolamprologus_brichardi
ENSLAFG00000025743	SRSF1	99	100.000	ENSNLEG00000008088	-	99	98.611	Nomascus_leucogenys
ENSLAFG00000025743	SRSF1	51	98.425	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSLAFG00000025743	SRSF1	74	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSLAFG00000025743	SRSF1	100	99.597	ENSODEG00000011481	-	100	99.597	Octodon_degus
ENSLAFG00000025743	SRSF1	78	91.710	ENSONIG00000013160	-	77	89.637	Oreochromis_niloticus
ENSLAFG00000025743	SRSF1	96	90.717	ENSONIG00000004860	-	81	90.863	Oreochromis_niloticus
ENSLAFG00000025743	SRSF1	100	70.325	ENSOCUG00000010894	-	77	73.545	Oryctolagus_cuniculus
ENSLAFG00000025743	SRSF1	78	92.228	ENSORLG00000004580	srsf1a	78	90.155	Oryzias_latipes
ENSLAFG00000025743	SRSF1	78	92.228	ENSORLG00020009456	srsf1a	83	90.155	Oryzias_latipes_hni
ENSLAFG00000025743	SRSF1	78	92.228	ENSORLG00015014384	srsf1a	83	90.155	Oryzias_latipes_hsok
ENSLAFG00000025743	SRSF1	71	90.341	ENSOMEG00000004106	srsf1a	71	88.068	Oryzias_melastigma
ENSLAFG00000025743	SRSF1	100	100.000	ENSOGAG00000025950	-	100	100.000	Otolemur_garnettii
ENSLAFG00000025743	SRSF1	100	96.624	ENSOARG00000008323	SRSF1	100	96.624	Ovis_aries
ENSLAFG00000025743	SRSF1	100	100.000	ENSPPAG00000043403	-	100	100.000	Pan_paniscus
ENSLAFG00000025743	SRSF1	100	100.000	ENSPPRG00000004238	-	100	100.000	Panthera_pardus
ENSLAFG00000025743	SRSF1	99	100.000	ENSPTRG00000049077	SRSF1	99	98.611	Pan_troglodytes
ENSLAFG00000025743	SRSF1	99	100.000	ENSPANG00000022305	-	99	98.611	Papio_anubis
ENSLAFG00000025743	SRSF1	99	79.565	ENSPANG00000030275	-	76	96.899	Papio_anubis
ENSLAFG00000025743	SRSF1	99	95.102	ENSPKIG00000007204	srsf1a	99	95.102	Paramormyrops_kingsleyae
ENSLAFG00000025743	SRSF1	100	95.968	ENSPKIG00000012857	srsf1b	100	95.968	Paramormyrops_kingsleyae
ENSLAFG00000025743	SRSF1	100	86.400	ENSPSIG00000009000	-	100	86.400	Pelodiscus_sinensis
ENSLAFG00000025743	SRSF1	96	84.937	ENSPMGG00000005467	-	77	87.151	Periophthalmus_magnuspinnatus
ENSLAFG00000025743	SRSF1	76	91.758	ENSPMGG00000013112	-	82	91.758	Periophthalmus_magnuspinnatus
ENSLAFG00000025743	SRSF1	100	100.000	ENSPEMG00000021416	Srsf1	100	100.000	Peromyscus_maniculatus_bairdii
ENSLAFG00000025743	SRSF1	100	99.197	ENSPCIG00000006076	-	100	99.197	Phascolarctos_cinereus
ENSLAFG00000025743	SRSF1	79	89.899	ENSPFOG00000018325	-	70	89.691	Poecilia_formosa
ENSLAFG00000025743	SRSF1	79	89.899	ENSPLAG00000008416	srsf1b	79	89.691	Poecilia_latipinna
ENSLAFG00000025743	SRSF1	50	89.431	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSLAFG00000025743	SRSF1	79	89.899	ENSPMEG00000002388	-	79	89.691	Poecilia_mexicana
ENSLAFG00000025743	SRSF1	50	89.431	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSLAFG00000025743	SRSF1	78	92.228	ENSPREG00000009667	srsf1a	78	90.155	Poecilia_reticulata
ENSLAFG00000025743	SRSF1	100	100.000	ENSPPYG00000008240	SRSF1	100	100.000	Pongo_abelii
ENSLAFG00000025743	SRSF1	100	100.000	ENSPCAG00000005199	SRSF1	100	100.000	Procavia_capensis
ENSLAFG00000025743	SRSF1	80	76.733	ENSPCOG00000025736	-	95	76.531	Propithecus_coquereli
ENSLAFG00000025743	SRSF1	100	100.000	ENSPCOG00000023654	-	100	100.000	Propithecus_coquereli
ENSLAFG00000025743	SRSF1	80	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSLAFG00000025743	SRSF1	94	93.162	ENSPNAG00000022241	srsf1a	78	90.206	Pygocentrus_nattereri
ENSLAFG00000025743	SRSF1	100	94.355	ENSPNAG00000014601	srsf1b	100	94.355	Pygocentrus_nattereri
ENSLAFG00000025743	SRSF1	100	100.000	ENSRNOG00000050323	Srsf1	100	100.000	Rattus_norvegicus
ENSLAFG00000025743	SRSF1	99	100.000	ENSRBIG00000034445	-	99	98.611	Rhinopithecus_bieti
ENSLAFG00000025743	SRSF1	100	100.000	ENSRROG00000041506	-	100	100.000	Rhinopithecus_roxellana
ENSLAFG00000025743	SRSF1	100	100.000	ENSSBOG00000025377	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSLAFG00000025743	SRSF1	100	99.197	ENSSHAG00000002552	-	100	99.197	Sarcophilus_harrisii
ENSLAFG00000025743	SRSF1	99	96.356	ENSSFOG00015004800	srsf1a	99	96.356	Scleropages_formosus
ENSLAFG00000025743	SRSF1	78	90.674	ENSSMAG00000007018	-	78	88.083	Scophthalmus_maximus
ENSLAFG00000025743	SRSF1	94	87.083	ENSSMAG00000009719	-	80	86.275	Scophthalmus_maximus
ENSLAFG00000025743	SRSF1	78	91.192	ENSSDUG00000011303	-	83	89.119	Seriola_dumerili
ENSLAFG00000025743	SRSF1	100	76.494	ENSSDUG00000003929	-	84	84.500	Seriola_dumerili
ENSLAFG00000025743	SRSF1	79	83.838	ENSSLDG00000016868	-	78	84.615	Seriola_lalandi_dorsalis
ENSLAFG00000025743	SRSF1	78	91.192	ENSSLDG00000010543	-	78	89.119	Seriola_lalandi_dorsalis
ENSLAFG00000025743	SRSF1	95	76.695	ENSSLDG00000016895	-	78	83.422	Seriola_lalandi_dorsalis
ENSLAFG00000025743	SRSF1	74	100.000	ENSSARG00000010949	-	63	100.000	Sorex_araneus
ENSLAFG00000025743	SRSF1	99	98.780	ENSSPUG00000000804	-	97	98.780	Sphenodon_punctatus
ENSLAFG00000025743	SRSF1	79	88.038	ENSSPAG00000014152	-	81	87.081	Stegastes_partitus
ENSLAFG00000025743	SRSF1	78	92.746	ENSSPAG00000022562	-	78	90.674	Stegastes_partitus
ENSLAFG00000025743	SRSF1	100	100.000	ENSSSCG00000017626	-	100	100.000	Sus_scrofa
ENSLAFG00000025743	SRSF1	74	98.370	ENSTGUG00000008416	-	100	98.370	Taeniopygia_guttata
ENSLAFG00000025743	SRSF1	78	91.192	ENSTRUG00000003691	srsf1a	78	89.119	Takifugu_rubripes
ENSLAFG00000025743	SRSF1	78	91.192	ENSTNIG00000016223	srsf1a	77	89.119	Tetraodon_nigroviridis
ENSLAFG00000025743	SRSF1	74	98.370	ENSTBEG00000015378	-	63	98.370	Tupaia_belangeri
ENSLAFG00000025743	SRSF1	74	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSLAFG00000025743	SRSF1	100	100.000	ENSUAMG00000009858	SRSF1	100	100.000	Ursus_americanus
ENSLAFG00000025743	SRSF1	99	100.000	ENSUMAG00000000455	-	97	100.000	Ursus_maritimus
ENSLAFG00000025743	SRSF1	100	99.597	ENSVPAG00000010094	SRSF1	100	99.597	Vicugna_pacos
ENSLAFG00000025743	SRSF1	99	100.000	ENSVVUG00000011882	-	97	100.000	Vulpes_vulpes
ENSLAFG00000025743	SRSF1	100	95.968	ENSXETG00000008954	srsf1	100	91.386	Xenopus_tropicalis
ENSLAFG00000025743	SRSF1	78	92.228	ENSXMAG00000011766	srsf1a	78	90.155	Xiphophorus_maculatus