EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000025838 (Gene tree)
Gene ID: -
Gene Symbol: THUMPD1
Alias: FLJ20274|Tan1
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 5192 bases
Position: chrscaffold_65:2530064-2535255
Accession: 100669134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027586	THUMP	PF02926.17	5.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031743	THUMPD1-201	1077	-	ENSLAFP00000027586	358 (aa)	XP_003418933	G3UIC8

Gene Model

Click here to download ENSLAFG00000025838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025838	THUMPD1	100	84.078	ENSG00000066654	THUMPD1	100	84.078	Homo_sapiens
ENSLAFG00000025838	THUMPD1	76	58.303	ENSAPOG00000008440	thumpd1	88	59.410	Acanthochromis_polyacanthus
ENSLAFG00000025838	THUMPD1	100	86.872	ENSAMEG00000006257	THUMPD1	99	86.872	Ailuropoda_melanoleuca
ENSLAFG00000025838	THUMPD1	72	59.533	ENSACIG00000024395	thumpd1	93	52.922	Amphilophus_citrinellus
ENSLAFG00000025838	THUMPD1	72	57.634	ENSAOCG00000003509	thumpd1	80	60.078	Amphiprion_ocellaris
ENSLAFG00000025838	THUMPD1	72	57.634	ENSAPEG00000010515	thumpd1	80	60.078	Amphiprion_percula
ENSLAFG00000025838	THUMPD1	81	56.701	ENSATEG00000004737	thumpd1	90	56.701	Anabas_testudineus
ENSLAFG00000025838	THUMPD1	76	73.646	ENSAPLG00000015259	THUMPD1	97	74.729	Anas_platyrhynchos
ENSLAFG00000025838	THUMPD1	84	64.630	ENSACAG00000009625	-	91	69.257	Anolis_carolinensis
ENSLAFG00000025838	THUMPD1	100	67.877	ENSANAG00000027040	-	100	67.877	Aotus_nancymaae
ENSLAFG00000025838	THUMPD1	100	83.799	ENSANAG00000026882	-	100	83.799	Aotus_nancymaae
ENSLAFG00000025838	THUMPD1	99	67.887	ENSANAG00000027311	-	100	67.887	Aotus_nancymaae
ENSLAFG00000025838	THUMPD1	72	57.634	ENSACLG00000004830	thumpd1	80	60.078	Astatotilapia_calliptera
ENSLAFG00000025838	THUMPD1	90	55.521	ENSAMXG00000012356	thumpd1	95	55.521	Astyanax_mexicanus
ENSLAFG00000025838	THUMPD1	99	86.555	ENSBTAG00000047673	THUMPD1	100	86.555	Bos_taurus
ENSLAFG00000025838	THUMPD1	96	84.012	ENSCJAG00000009499	THUMPD1	100	83.520	Callithrix_jacchus
ENSLAFG00000025838	THUMPD1	100	86.313	ENSCAFG00000017985	THUMPD1	99	86.313	Canis_familiaris
ENSLAFG00000025838	THUMPD1	100	86.313	ENSCAFG00020021861	THUMPD1	99	86.313	Canis_lupus_dingo
ENSLAFG00000025838	THUMPD1	99	85.994	ENSCHIG00000010134	THUMPD1	99	85.994	Capra_hircus
ENSLAFG00000025838	THUMPD1	99	84.551	ENSTSYG00000011537	THUMPD1	99	84.551	Carlito_syrichta
ENSLAFG00000025838	THUMPD1	96	81.739	ENSCPOG00000008919	-	100	81.616	Cavia_porcellus
ENSLAFG00000025838	THUMPD1	96	81.739	ENSCPOG00000023684	-	100	81.616	Cavia_porcellus
ENSLAFG00000025838	THUMPD1	100	77.095	ENSCCAG00000019379	-	86	77.095	Cebus_capucinus
ENSLAFG00000025838	THUMPD1	100	82.961	ENSCCAG00000030205	THUMPD1	100	82.961	Cebus_capucinus
ENSLAFG00000025838	THUMPD1	99	69.613	ENSCATG00000020844	-	99	69.613	Cercocebus_atys
ENSLAFG00000025838	THUMPD1	100	83.520	ENSCATG00000040309	THUMPD1	100	83.520	Cercocebus_atys
ENSLAFG00000025838	THUMPD1	100	81.285	ENSCLAG00000016508	THUMPD1	100	81.285	Chinchilla_lanigera
ENSLAFG00000025838	THUMPD1	99	83.754	ENSCSAG00000007610	THUMPD1	99	83.754	Chlorocebus_sabaeus
ENSLAFG00000025838	THUMPD1	100	67.680	ENSCSAG00000009860	-	80	67.680	Chlorocebus_sabaeus
ENSLAFG00000025838	THUMPD1	100	85.475	ENSCHOG00000005587	THUMPD1	100	85.475	Choloepus_hoffmanni
ENSLAFG00000025838	THUMPD1	76	79.197	ENSCPBG00000019055	THUMPD1	77	79.197	Chrysemys_picta_bellii
ENSLAFG00000025838	THUMPD1	87	73.802	ENSCANG00000035822	-	100	73.802	Colobus_angolensis_palliatus
ENSLAFG00000025838	THUMPD1	87	76.206	ENSCANG00000038770	THUMPD1	100	76.206	Colobus_angolensis_palliatus
ENSLAFG00000025838	THUMPD1	100	83.520	ENSCGRG00001014829	Thumpd1	100	83.520	Cricetulus_griseus_chok1gshd
ENSLAFG00000025838	THUMPD1	100	83.520	ENSCGRG00000000060	Thumpd1	100	83.520	Cricetulus_griseus_crigri
ENSLAFG00000025838	THUMPD1	87	53.918	ENSCSEG00000002041	thumpd1	94	55.593	Cynoglossus_semilaevis
ENSLAFG00000025838	THUMPD1	79	58.885	ENSCVAG00000014960	thumpd1	89	58.503	Cyprinodon_variegatus
ENSLAFG00000025838	THUMPD1	66	60.851	ENSDARG00000100264	thumpd1	67	60.851	Danio_rerio
ENSLAFG00000025838	THUMPD1	100	87.151	ENSDNOG00000043510	THUMPD1	100	87.151	Dasypus_novemcinctus
ENSLAFG00000025838	THUMPD1	100	78.237	ENSDORG00000028216	Thumpd1	100	78.237	Dipodomys_ordii
ENSLAFG00000025838	THUMPD1	80	32.026	FBgn0035532	CG15014	89	32.484	Drosophila_melanogaster
ENSLAFG00000025838	THUMPD1	100	82.222	ENSETEG00000002763	THUMPD1	84	82.222	Echinops_telfairi
ENSLAFG00000025838	THUMPD1	81	41.042	ENSEBUG00000011011	THUMPD1	82	41.042	Eptatretus_burgeri
ENSLAFG00000025838	THUMPD1	55	82.741	ENSEASG00005017428	-	100	82.741	Equus_asinus_asinus
ENSLAFG00000025838	THUMPD1	100	85.196	ENSECAG00000005354	THUMPD1	100	85.196	Equus_caballus
ENSLAFG00000025838	THUMPD1	100	82.094	ENSEEUG00000011256	THUMPD1	88	82.645	Erinaceus_europaeus
ENSLAFG00000025838	THUMPD1	73	61.538	ENSELUG00000013612	thumpd1	61	61.923	Esox_lucius
ENSLAFG00000025838	THUMPD1	100	86.313	ENSFCAG00000039296	THUMPD1	100	86.313	Felis_catus
ENSLAFG00000025838	THUMPD1	63	79.913	ENSFALG00000014029	THUMPD1	91	75.397	Ficedula_albicollis
ENSLAFG00000025838	THUMPD1	72	58.462	ENSFHEG00000013319	thumpd1	97	50.445	Fundulus_heteroclitus
ENSLAFG00000025838	THUMPD1	86	54.808	ENSGMOG00000003369	thumpd1	96	54.808	Gadus_morhua
ENSLAFG00000025838	THUMPD1	87	53.333	ENSGAFG00000011000	thumpd1	98	53.651	Gambusia_affinis
ENSLAFG00000025838	THUMPD1	72	61.628	ENSGACG00000019511	thumpd1	79	61.628	Gasterosteus_aculeatus
ENSLAFG00000025838	THUMPD1	89	70.000	ENSGAGG00000008225	THUMPD1	98	70.000	Gopherus_agassizii
ENSLAFG00000025838	THUMPD1	96	60.174	ENSGGOG00000043232	-	100	60.615	Gorilla_gorilla
ENSLAFG00000025838	THUMPD1	100	84.078	ENSGGOG00000005231	-	80	84.078	Gorilla_gorilla
ENSLAFG00000025838	THUMPD1	72	58.140	ENSHBUG00000017996	thumpd1	80	59.690	Haplochromis_burtoni
ENSLAFG00000025838	THUMPD1	100	81.894	ENSHGLG00000011001	-	100	81.894	Heterocephalus_glaber_female
ENSLAFG00000025838	THUMPD1	61	68.807	ENSHGLG00000000952	-	100	68.807	Heterocephalus_glaber_female
ENSLAFG00000025838	THUMPD1	61	68.807	ENSHGLG00100010577	-	100	68.807	Heterocephalus_glaber_male
ENSLAFG00000025838	THUMPD1	100	82.451	ENSHGLG00100016023	THUMPD1	100	82.451	Heterocephalus_glaber_male
ENSLAFG00000025838	THUMPD1	68	56.148	ENSHCOG00000008618	thumpd1	52	57.826	Hippocampus_comes
ENSLAFG00000025838	THUMPD1	80	54.167	ENSIPUG00000012500	thumpd1	73	52.698	Ictalurus_punctatus
ENSLAFG00000025838	THUMPD1	99	85.674	ENSSTOG00000007011	THUMPD1	99	85.674	Ictidomys_tridecemlineatus
ENSLAFG00000025838	THUMPD1	100	80.447	ENSJJAG00000004295	-	100	80.447	Jaculus_jaculus
ENSLAFG00000025838	THUMPD1	72	54.753	ENSKMAG00000009545	thumpd1	74	50.318	Kryptolebias_marmoratus
ENSLAFG00000025838	THUMPD1	65	66.379	ENSLBEG00000009349	thumpd1	72	66.379	Labrus_bergylta
ENSLAFG00000025838	THUMPD1	73	66.667	ENSLACG00000005833	THUMPD1	85	63.666	Latimeria_chalumnae
ENSLAFG00000025838	THUMPD1	77	60.638	ENSLOCG00000000854	thumpd1	91	60.627	Lepisosteus_oculatus
ENSLAFG00000025838	THUMPD1	100	83.520	ENSMFAG00000036996	THUMPD1	100	83.520	Macaca_fascicularis
ENSLAFG00000025838	THUMPD1	87	70.253	ENSMFAG00000041474	-	100	70.253	Macaca_fascicularis
ENSLAFG00000025838	THUMPD1	100	83.520	ENSMMUG00000004225	THUMPD1	100	83.520	Macaca_mulatta
ENSLAFG00000025838	THUMPD1	87	69.937	ENSMMUG00000038414	-	100	69.937	Macaca_mulatta
ENSLAFG00000025838	THUMPD1	100	83.520	ENSMNEG00000020726	THUMPD1	100	83.520	Macaca_nemestrina
ENSLAFG00000025838	THUMPD1	87	69.937	ENSMNEG00000038856	-	100	69.937	Macaca_nemestrina
ENSLAFG00000025838	THUMPD1	87	71.019	ENSMLEG00000030012	-	99	71.019	Mandrillus_leucophaeus
ENSLAFG00000025838	THUMPD1	100	83.240	ENSMLEG00000036436	THUMPD1	100	83.240	Mandrillus_leucophaeus
ENSLAFG00000025838	THUMPD1	75	59.925	ENSMAMG00000006858	thumpd1	98	52.761	Mastacembelus_armatus
ENSLAFG00000025838	THUMPD1	72	58.140	ENSMZEG00005013693	thumpd1	80	59.690	Maylandia_zebra
ENSLAFG00000025838	THUMPD1	57	79.803	ENSMGAG00000010340	THUMPD1	99	79.803	Meleagris_gallopavo
ENSLAFG00000025838	THUMPD1	100	82.682	ENSMAUG00000013306	Thumpd1	100	82.682	Mesocricetus_auratus
ENSLAFG00000025838	THUMPD1	99	67.042	ENSMICG00000030865	-	95	67.330	Microcebus_murinus
ENSLAFG00000025838	THUMPD1	100	86.034	ENSMICG00000038483	-	100	86.034	Microcebus_murinus
ENSLAFG00000025838	THUMPD1	100	83.240	ENSMOCG00000003447	Thumpd1	100	83.240	Microtus_ochrogaster
ENSLAFG00000025838	THUMPD1	72	58.397	ENSMMOG00000011323	thumpd1	77	58.397	Mola_mola
ENSLAFG00000025838	THUMPD1	99	73.077	ENSMODG00000006971	-	98	73.901	Monodelphis_domestica
ENSLAFG00000025838	THUMPD1	99	72.802	ENSMODG00000024776	-	99	74.176	Monodelphis_domestica
ENSLAFG00000025838	THUMPD1	72	60.700	ENSMALG00000019522	thumpd1	82	60.700	Monopterus_albus
ENSLAFG00000025838	THUMPD1	100	80.447	MGP_CAROLIEiJ_G0030382	Thumpd1	100	80.447	Mus_caroli
ENSLAFG00000025838	THUMPD1	100	81.006	ENSMUSG00000030942	Thumpd1	100	81.006	Mus_musculus
ENSLAFG00000025838	THUMPD1	100	80.556	MGP_PahariEiJ_G0013593	Thumpd1	100	80.556	Mus_pahari
ENSLAFG00000025838	THUMPD1	90	83.801	ENSMLUG00000010547	THUMPD1	98	79.656	Myotis_lucifugus
ENSLAFG00000025838	THUMPD1	99	83.473	ENSNGAG00000018643	Thumpd1	100	83.473	Nannospalax_galili
ENSLAFG00000025838	THUMPD1	86	52.769	ENSNBRG00000006987	thumpd1	87	52.769	Neolamprologus_brichardi
ENSLAFG00000025838	THUMPD1	100	83.799	ENSNLEG00000012369	THUMPD1	100	83.799	Nomascus_leucogenys
ENSLAFG00000025838	THUMPD1	100	65.642	ENSOPRG00000011342	THUMPD1	86	65.642	Ochotona_princeps
ENSLAFG00000025838	THUMPD1	100	81.337	ENSODEG00000012360	THUMPD1	100	81.337	Octodon_degus
ENSLAFG00000025838	THUMPD1	72	58.140	ENSONIG00000000146	thumpd1	90	59.690	Oreochromis_niloticus
ENSLAFG00000025838	THUMPD1	99	67.308	ENSOANG00000014297	THUMPD1	100	67.308	Ornithorhynchus_anatinus
ENSLAFG00000025838	THUMPD1	97	83.954	ENSOCUG00000009895	-	97	83.954	Oryctolagus_cuniculus
ENSLAFG00000025838	THUMPD1	63	77.679	ENSOCUG00000025354	-	100	77.679	Oryctolagus_cuniculus
ENSLAFG00000025838	THUMPD1	78	55.674	ENSORLG00000027557	thumpd1	98	53.055	Oryzias_latipes
ENSLAFG00000025838	THUMPD1	72	58.527	ENSORLG00020010206	thumpd1	98	52.090	Oryzias_latipes_hni
ENSLAFG00000025838	THUMPD1	72	58.527	ENSORLG00015009581	thumpd1	98	52.412	Oryzias_latipes_hsok
ENSLAFG00000025838	THUMPD1	72	59.846	ENSOMEG00000019361	thumpd1	78	59.846	Oryzias_melastigma
ENSLAFG00000025838	THUMPD1	99	84.507	ENSOGAG00000026723	THUMPD1	99	84.507	Otolemur_garnettii
ENSLAFG00000025838	THUMPD1	99	86.275	ENSOARG00000013107	THUMPD1	99	86.275	Ovis_aries
ENSLAFG00000025838	THUMPD1	100	83.520	ENSPPAG00000033818	-	80	83.520	Pan_paniscus
ENSLAFG00000025838	THUMPD1	96	65.116	ENSPPAG00000001653	-	96	70.701	Pan_paniscus
ENSLAFG00000025838	THUMPD1	100	87.151	ENSPPRG00000014118	-	100	87.151	Panthera_pardus
ENSLAFG00000025838	THUMPD1	100	86.313	ENSPTIG00000013856	-	100	86.313	Panthera_tigris_altaica
ENSLAFG00000025838	THUMPD1	96	63.953	ENSPTRG00000046073	-	100	64.246	Pan_troglodytes
ENSLAFG00000025838	THUMPD1	100	83.240	ENSPTRG00000007848	THUMPD1	80	83.240	Pan_troglodytes
ENSLAFG00000025838	THUMPD1	100	83.520	ENSPANG00000025507	THUMPD1	100	83.520	Papio_anubis
ENSLAFG00000025838	THUMPD1	87	70.159	ENSPANG00000034881	-	99	70.159	Papio_anubis
ENSLAFG00000025838	THUMPD1	72	65.116	ENSPKIG00000014491	thumpd1	97	56.782	Paramormyrops_kingsleyae
ENSLAFG00000025838	THUMPD1	78	75.357	ENSPSIG00000012430	THUMPD1	97	75.357	Pelodiscus_sinensis
ENSLAFG00000025838	THUMPD1	72	61.217	ENSPMGG00000014479	thumpd1	90	61.217	Periophthalmus_magnuspinnatus
ENSLAFG00000025838	THUMPD1	66	64.286	ENSPEMG00000002608	-	99	64.706	Peromyscus_maniculatus_bairdii
ENSLAFG00000025838	THUMPD1	61	50.917	ENSPMAG00000001389	thumpd1	85	56.425	Petromyzon_marinus
ENSLAFG00000025838	THUMPD1	100	72.678	ENSPCIG00000029241	THUMPD1	72	73.497	Phascolarctos_cinereus
ENSLAFG00000025838	THUMPD1	87	54.259	ENSPFOG00000012649	thumpd1	98	54.574	Poecilia_formosa
ENSLAFG00000025838	THUMPD1	87	54.114	ENSPLAG00000000137	thumpd1	98	54.430	Poecilia_latipinna
ENSLAFG00000025838	THUMPD1	87	54.430	ENSPMEG00000007750	thumpd1	98	54.747	Poecilia_mexicana
ENSLAFG00000025838	THUMPD1	73	60.456	ENSPREG00000000144	thumpd1	93	58.845	Poecilia_reticulata
ENSLAFG00000025838	THUMPD1	78	82.206	ENSPPYG00000007160	-	100	82.206	Pongo_abelii
ENSLAFG00000025838	THUMPD1	78	87.589	ENSPCAG00000001534	THUMPD1	100	87.589	Procavia_capensis
ENSLAFG00000025838	THUMPD1	100	86.034	ENSPCOG00000024663	THUMPD1	100	86.034	Propithecus_coquereli
ENSLAFG00000025838	THUMPD1	100	78.611	ENSPVAG00000005659	-	100	78.611	Pteropus_vampyrus
ENSLAFG00000025838	THUMPD1	62	74.554	ENSPVAG00000003286	-	99	74.554	Pteropus_vampyrus
ENSLAFG00000025838	THUMPD1	72	58.140	ENSPNYG00000007061	thumpd1	79	59.690	Pundamilia_nyererei
ENSLAFG00000025838	THUMPD1	84	55.814	ENSPNAG00000024872	thumpd1	97	56.811	Pygocentrus_nattereri
ENSLAFG00000025838	THUMPD1	63	79.911	ENSRNOG00000014946	AABR07005588.1	100	79.911	Rattus_norvegicus
ENSLAFG00000025838	THUMPD1	100	84.078	ENSRBIG00000040752	THUMPD1	100	84.078	Rhinopithecus_bieti
ENSLAFG00000025838	THUMPD1	87	74.121	ENSRBIG00000040136	-	100	74.121	Rhinopithecus_bieti
ENSLAFG00000025838	THUMPD1	100	83.799	ENSRROG00000042189	THUMPD1	100	83.799	Rhinopithecus_roxellana
ENSLAFG00000025838	THUMPD1	87	73.802	ENSRROG00000045699	-	100	73.802	Rhinopithecus_roxellana
ENSLAFG00000025838	THUMPD1	100	83.240	ENSSBOG00000034246	THUMPD1	100	83.240	Saimiri_boliviensis_boliviensis
ENSLAFG00000025838	THUMPD1	100	73.352	ENSSHAG00000003853	THUMPD1	99	73.352	Sarcophilus_harrisii
ENSLAFG00000025838	THUMPD1	79	53.103	ENSSFOG00015007512	thumpd1	91	51.307	Scleropages_formosus
ENSLAFG00000025838	THUMPD1	72	60.311	ENSSMAG00000000723	thumpd1	78	60.311	Scophthalmus_maximus
ENSLAFG00000025838	THUMPD1	87	51.429	ENSSDUG00000014502	thumpd1	97	53.016	Seriola_dumerili
ENSLAFG00000025838	THUMPD1	87	51.746	ENSSLDG00000007694	thumpd1	97	53.333	Seriola_lalandi_dorsalis
ENSLAFG00000025838	THUMPD1	81	72.391	ENSSPUG00000005096	THUMPD1	90	72.575	Sphenodon_punctatus
ENSLAFG00000025838	THUMPD1	87	53.292	ENSSPAG00000006993	thumpd1	98	53.605	Stegastes_partitus
ENSLAFG00000025838	THUMPD1	100	86.630	ENSSSCG00000024748	THUMPD1	100	86.630	Sus_scrofa
ENSLAFG00000025838	THUMPD1	74	73.881	ENSTGUG00000009247	THUMPD1	97	75.000	Taeniopygia_guttata
ENSLAFG00000025838	THUMPD1	82	55.556	ENSTRUG00000015656	thumpd1	95	55.882	Takifugu_rubripes
ENSLAFG00000025838	THUMPD1	82	56.610	ENSTNIG00000001584	thumpd1	96	56.949	Tetraodon_nigroviridis
ENSLAFG00000025838	THUMPD1	100	86.313	ENSTBEG00000005252	THUMPD1	88	86.313	Tupaia_belangeri
ENSLAFG00000025838	THUMPD1	100	86.034	ENSTTRG00000016435	THUMPD1	100	86.034	Tursiops_truncatus
ENSLAFG00000025838	THUMPD1	63	75.893	ENSUAMG00000005779	-	100	75.893	Ursus_americanus
ENSLAFG00000025838	THUMPD1	100	85.196	ENSVPAG00000003422	THUMPD1	100	85.196	Vicugna_pacos
ENSLAFG00000025838	THUMPD1	100	86.592	ENSVVUG00000023241	THUMPD1	99	86.592	Vulpes_vulpes
ENSLAFG00000025838	THUMPD1	73	62.595	ENSXETG00000005539	thumpd1	90	62.595	Xenopus_tropicalis
ENSLAFG00000025838	THUMPD1	87	53.968	ENSXMAG00000026052	thumpd1	98	54.286	Xiphophorus_maculatus