EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000025902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 342129 bases
Position: chrscaffold_57:4368145-4710273
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000028069	RRM_1	PF00076.22	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000025356	-	747	-	ENSLAFP00000028069	248 (aa)	-	G3UJR0
ENSLAFT00000035277	-	636	-	ENSLAFP00000024408	212 (aa)	-	G3U9A0

Gene Model

Click here to download ENSLAFG00000025902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000025902	-	60	60.667	ENSLAFG00000031227	-	99	60.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025902	-	78	65.306	ENSG00000205022	PABPN1L	70	65.306	Homo_sapiens
ENSLAFG00000025902	-	56	58.993	ENSACIG00000021400	PABPN1L	78	58.273	Amphilophus_citrinellus
ENSLAFG00000025902	-	50	57.554	ENSATEG00000011646	PABPN1L	74	48.925	Anabas_testudineus
ENSLAFG00000025902	-	78	58.031	ENSACAG00000013250	PABPN1L	99	58.031	Anolis_carolinensis
ENSLAFG00000025902	-	78	66.667	ENSANAG00000038178	PABPN1L	70	66.667	Aotus_nancymaae
ENSLAFG00000025902	-	56	58.993	ENSACLG00000025147	PABPN1L	66	49.457	Astatotilapia_calliptera
ENSLAFG00000025902	-	59	50.980	ENSAMXG00000010873	PABPN1L	65	50.000	Astyanax_mexicanus
ENSLAFG00000025902	-	58	76.224	ENSBTAG00000006727	-	86	79.021	Bos_taurus
ENSLAFG00000025902	-	78	63.731	ENSBTAG00000023752	-	69	64.249	Bos_taurus
ENSLAFG00000025902	-	78	63.776	ENSCJAG00000045284	PABPN1L	70	63.776	Callithrix_jacchus
ENSLAFG00000025902	-	78	60.976	ENSCHIG00000013987	PABPN1L	74	60.976	Capra_hircus
ENSLAFG00000025902	-	71	65.922	ENSCAPG00000007240	PABPN1L	67	65.922	Cavia_aperea
ENSLAFG00000025902	-	78	63.776	ENSCPOG00000025951	PABPN1L	71	65.306	Cavia_porcellus
ENSLAFG00000025902	-	78	65.990	ENSCCAG00000027631	PABPN1L	70	65.990	Cebus_capucinus
ENSLAFG00000025902	-	78	66.837	ENSCATG00000031060	PABPN1L	71	66.837	Cercocebus_atys
ENSLAFG00000025902	-	78	64.286	ENSCLAG00000000704	PABPN1L	71	64.796	Chinchilla_lanigera
ENSLAFG00000025902	-	78	62.736	ENSCSAG00000002881	PABPN1L	72	62.736	Chlorocebus_sabaeus
ENSLAFG00000025902	-	78	57.949	ENSCPBG00000023441	PABPN1L	61	60.000	Chrysemys_picta_bellii
ENSLAFG00000025902	-	78	66.837	ENSCANG00000039336	PABPN1L	70	66.837	Colobus_angolensis_palliatus
ENSLAFG00000025902	-	78	66.837	ENSCGRG00001013211	Pabpn1l	85	58.678	Cricetulus_griseus_chok1gshd
ENSLAFG00000025902	-	78	66.837	ENSCGRG00000015868	Pabpn1l	85	58.678	Cricetulus_griseus_crigri
ENSLAFG00000025902	-	58	53.793	ENSCSEG00000001142	pabpn1l	60	54.037	Cynoglossus_semilaevis
ENSLAFG00000025902	-	78	58.673	ENSDNOG00000034677	PABPN1L	67	60.714	Dasypus_novemcinctus
ENSLAFG00000025902	-	78	68.182	ENSEASG00005000777	PABPN1L	77	63.636	Equus_asinus_asinus
ENSLAFG00000025902	-	78	67.839	ENSECAG00000000378	PABPN1L	72	67.839	Equus_caballus
ENSLAFG00000025902	-	88	55.405	ENSEEUG00000004747	PABPN1L	81	55.405	Erinaceus_europaeus
ENSLAFG00000025902	-	78	69.500	ENSFCAG00000010465	PABPN1L	70	70.000	Felis_catus
ENSLAFG00000025902	-	77	57.868	ENSFALG00000003319	PABPN1L	96	51.240	Ficedula_albicollis
ENSLAFG00000025902	-	78	62.245	ENSFDAG00000021067	PABPN1L	71	64.286	Fukomys_damarensis
ENSLAFG00000025902	-	60	67.333	ENSGALG00000006242	PABPN1L	85	67.333	Gallus_gallus
ENSLAFG00000025902	-	71	58.523	ENSGAGG00000010613	PABPN1L	59	58.523	Gopherus_agassizii
ENSLAFG00000025902	-	78	64.796	ENSGGOG00000012670	PABPN1L	71	64.796	Gorilla_gorilla
ENSLAFG00000025902	-	56	58.993	ENSHBUG00000002388	PABPN1L	50	58.993	Haplochromis_burtoni
ENSLAFG00000025902	-	72	65.385	ENSHGLG00000014207	PABPN1L	70	65.385	Heterocephalus_glaber_female
ENSLAFG00000025902	-	72	65.385	ENSHGLG00100005230	PABPN1L	70	65.385	Heterocephalus_glaber_male
ENSLAFG00000025902	-	88	60.526	ENSSTOG00000020814	PABPN1L	87	58.871	Ictidomys_tridecemlineatus
ENSLAFG00000025902	-	79	67.172	ENSJJAG00000006433	Pabpn1l	70	67.876	Jaculus_jaculus
ENSLAFG00000025902	-	78	66.327	ENSMFAG00000002924	PABPN1L	71	66.327	Macaca_fascicularis
ENSLAFG00000025902	-	78	65.641	ENSMMUG00000012438	PABPN1L	70	65.641	Macaca_mulatta
ENSLAFG00000025902	-	78	66.327	ENSMNEG00000044808	PABPN1L	71	66.327	Macaca_nemestrina
ENSLAFG00000025902	-	78	66.327	ENSMLEG00000032667	PABPN1L	71	66.327	Mandrillus_leucophaeus
ENSLAFG00000025902	-	56	58.993	ENSMZEG00005002186	PABPN1L	66	49.457	Maylandia_zebra
ENSLAFG00000025902	-	78	64.286	ENSMAUG00000014032	Pabpn1l	72	64.286	Mesocricetus_auratus
ENSLAFG00000025902	-	78	68.367	ENSMICG00000028179	PABPN1L	71	68.367	Microcebus_murinus
ENSLAFG00000025902	-	92	55.466	ENSMOCG00000007955	Pabpn1l	86	55.466	Microtus_ochrogaster
ENSLAFG00000025902	-	77	55.330	ENSMODG00000003873	-	73	55.330	Monodelphis_domestica
ENSLAFG00000025902	-	78	60.714	MGP_CAROLIEiJ_G0031670	Pabpn1l	71	60.714	Mus_caroli
ENSLAFG00000025902	-	86	56.164	ENSMUSG00000069867	Pabpn1l	71	60.714	Mus_musculus
ENSLAFG00000025902	-	78	60.714	MGP_PahariEiJ_G0023268	Pabpn1l	71	60.714	Mus_pahari
ENSLAFG00000025902	-	78	60.406	MGP_SPRETEiJ_G0032788	Pabpn1l	71	60.406	Mus_spretus
ENSLAFG00000025902	-	85	49.772	ENSMLUG00000003228	PABPN1L	75	49.772	Myotis_lucifugus
ENSLAFG00000025902	-	78	65.816	ENSNGAG00000023992	Pabpn1l	71	65.816	Nannospalax_galili
ENSLAFG00000025902	-	56	58.993	ENSNBRG00000017078	PABPN1L	55	58.993	Neolamprologus_brichardi
ENSLAFG00000025902	-	78	69.036	ENSOPRG00000005597	PABPN1L	71	69.036	Ochotona_princeps
ENSLAFG00000025902	-	79	62.121	ENSODEG00000004649	PABPN1L	67	62.121	Octodon_degus
ENSLAFG00000025902	-	77	59.896	ENSOANG00000013901	PABPN1L	72	61.979	Ornithorhynchus_anatinus
ENSLAFG00000025902	-	74	49.730	ENSORLG00000026560	PABPN1L	66	49.730	Oryzias_latipes
ENSLAFG00000025902	-	74	49.730	ENSORLG00020015068	PABPN1L	66	49.730	Oryzias_latipes_hni
ENSLAFG00000025902	-	74	49.730	ENSORLG00015000397	PABPN1L	66	49.730	Oryzias_latipes_hsok
ENSLAFG00000025902	-	78	71.795	ENSOGAG00000000433	PABPN1L	70	71.795	Otolemur_garnettii
ENSLAFG00000025902	-	80	68.246	ENSOARG00000013682	PABPN1L	69	68.720	Ovis_aries
ENSLAFG00000025902	-	78	65.816	ENSPPAG00000028866	PABPN1L	70	65.816	Pan_paniscus
ENSLAFG00000025902	-	78	69.000	ENSPPRG00000015106	PABPN1L	70	69.500	Panthera_pardus
ENSLAFG00000025902	-	69	65.116	ENSPTIG00000015606	PABPN1L	66	65.116	Panthera_tigris_altaica
ENSLAFG00000025902	-	78	65.816	ENSPTRG00000031120	PABPN1L	70	65.816	Pan_troglodytes
ENSLAFG00000025902	-	78	66.327	ENSPANG00000026039	PABPN1L	71	66.327	Papio_anubis
ENSLAFG00000025902	-	77	58.031	ENSPSIG00000003404	PABPN1L	100	60.104	Pelodiscus_sinensis
ENSLAFG00000025902	-	55	56.429	ENSPMGG00000013927	PABPN1L	76	56.429	Periophthalmus_magnuspinnatus
ENSLAFG00000025902	-	78	65.816	ENSPEMG00000016624	Pabpn1l	72	65.816	Peromyscus_maniculatus_bairdii
ENSLAFG00000025902	-	58	65.278	ENSPCIG00000007038	-	99	65.278	Phascolarctos_cinereus
ENSLAFG00000025902	-	78	65.306	ENSPPYG00000007655	PABPN1L	70	65.306	Pongo_abelii
ENSLAFG00000025902	-	78	67.857	ENSPCOG00000024077	PABPN1L	71	67.857	Propithecus_coquereli
ENSLAFG00000025902	-	78	67.677	ENSPVAG00000002716	PABPN1L	70	67.677	Pteropus_vampyrus
ENSLAFG00000025902	-	56	58.993	ENSPNYG00000004803	PABPN1L	66	49.457	Pundamilia_nyererei
ENSLAFG00000025902	-	78	66.837	ENSRNOG00000029558	Pabpn1l	72	66.837	Rattus_norvegicus
ENSLAFG00000025902	-	78	66.327	ENSRBIG00000030740	PABPN1L	71	66.327	Rhinopithecus_bieti
ENSLAFG00000025902	-	77	66.154	ENSRROG00000035483	-	70	66.154	Rhinopithecus_roxellana
ENSLAFG00000025902	-	78	65.816	ENSRROG00000032240	-	71	65.816	Rhinopithecus_roxellana
ENSLAFG00000025902	-	78	66.667	ENSSBOG00000018410	PABPN1L	70	66.667	Saimiri_boliviensis_boliviensis
ENSLAFG00000025902	-	77	57.843	ENSSHAG00000010001	-	71	57.843	Sarcophilus_harrisii
ENSLAFG00000025902	-	70	51.429	ENSSARG00000005178	-	68	51.429	Sorex_araneus
ENSLAFG00000025902	-	77	59.278	ENSSPUG00000007031	PABPN1L	84	59.487	Sphenodon_punctatus
ENSLAFG00000025902	-	58	58.333	ENSSPAG00000017978	PABPN1L	67	50.000	Stegastes_partitus
ENSLAFG00000025902	-	86	62.727	ENSSSCG00000036367	PABPN1L	77	65.315	Sus_scrofa
ENSLAFG00000025902	-	79	65.500	ENSTTRG00000004691	PABPN1L	71	67.805	Tursiops_truncatus
ENSLAFG00000025902	-	58	54.545	ENSXETG00000011258	pabpn1l	89	50.739	Xenopus_tropicalis