EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000025950 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 2547 bases
Position: chrscaffold_130:1246395-1248941
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024249	Tap-RNA_bind	PF09162.10	6.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000032661	-	930	-	ENSLAFP00000024249	310 (aa)	-	G3U8U1

Gene Model

Click here to download ENSLAFG00000025950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000025950	-	95	85.473	ENSLAFG00000029092	-	52	85.473
ENSLAFG00000025950	-	95	85.522	ENSLAFG00000026933	-	52	85.522
ENSLAFG00000025950	-	76	84.874	ENSLAFG00000030268	-	66	84.874
ENSLAFG00000025950	-	95	73.379	ENSLAFG00000015213	-	53	73.379
ENSLAFG00000025950	-	95	81.333	ENSLAFG00000031135	-	52	81.333
ENSLAFG00000025950	-	95	86.486	ENSLAFG00000031277	-	52	86.486
ENSLAFG00000025950	-	95	82.095	ENSLAFG00000028100	-	51	82.095
ENSLAFG00000025950	-	95	82.432	ENSLAFG00000028203	-	52	82.432
ENSLAFG00000025950	-	95	64.527	ENSLAFG00000015206	-	51	64.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025950	-	76	50.638	ENSG00000126952	NXF5	95	53.459	Homo_sapiens
ENSLAFG00000025950	-	97	53.488	ENSG00000162231	NXF1	100	56.522	Homo_sapiens
ENSLAFG00000025950	-	95	45.578	ENSAMEG00000011550	-	58	45.578	Ailuropoda_melanoleuca
ENSLAFG00000025950	-	75	42.489	ENSANAG00000027180	-	57	42.489	Aotus_nancymaae
ENSLAFG00000025950	-	98	45.574	ENSBTAG00000022502	-	63	45.902	Bos_taurus
ENSLAFG00000025950	-	93	49.306	ENSBTAG00000032787	-	51	49.306	Bos_taurus
ENSLAFG00000025950	-	65	49.754	ENSBTAG00000005319	-	57	49.754	Bos_taurus
ENSLAFG00000025950	-	76	46.186	ENSCJAG00000009652	-	66	46.186	Callithrix_jacchus
ENSLAFG00000025950	-	95	44.710	ENSCJAG00000019686	-	82	44.710	Callithrix_jacchus
ENSLAFG00000025950	-	95	55.405	ENSCAFG00000014031	NXF3	51	55.405	Canis_familiaris
ENSLAFG00000025950	-	94	46.416	ENSCAFG00020007236	-	56	48.347	Canis_lupus_dingo
ENSLAFG00000025950	-	88	50.735	ENSCAFG00020007326	-	62	50.735	Canis_lupus_dingo
ENSLAFG00000025950	-	75	48.347	ENSCAFG00020007291	-	56	48.347	Canis_lupus_dingo
ENSLAFG00000025950	-	99	51.299	ENSCAFG00020007169	-	51	51.299	Canis_lupus_dingo
ENSLAFG00000025950	-	99	51.299	ENSCAFG00020007156	-	51	51.299	Canis_lupus_dingo
ENSLAFG00000025950	-	81	48.800	ENSCAFG00020007216	-	62	48.800	Canis_lupus_dingo
ENSLAFG00000025950	-	95	51.852	ENSCHIG00000010065	NXF1	50	47.678	Capra_hircus
ENSLAFG00000025950	-	86	49.630	ENSCHIG00000018407	-	54	49.630	Capra_hircus
ENSLAFG00000025950	-	95	44.595	ENSCHIG00000020751	-	50	44.932	Capra_hircus
ENSLAFG00000025950	-	93	45.675	ENSCHIG00000010744	-	52	41.379	Capra_hircus
ENSLAFG00000025950	-	61	49.474	ENSTSYG00000037237	-	54	49.474	Carlito_syrichta
ENSLAFG00000025950	-	94	43.390	ENSCAPG00000012814	-	52	43.390	Cavia_aperea
ENSLAFG00000025950	-	91	43.860	ENSCPOG00000003136	-	52	37.538	Cavia_porcellus
ENSLAFG00000025950	-	95	53.559	ENSCPOG00000006126	NXF1	76	53.559	Cavia_porcellus
ENSLAFG00000025950	-	82	45.882	ENSCCAG00000027842	-	58	49.065	Cebus_capucinus
ENSLAFG00000025950	-	97	53.488	ENSCATG00000044025	NXF1	50	53.488	Cercocebus_atys
ENSLAFG00000025950	-	95	53.220	ENSCLAG00000001490	NXF1	76	53.220	Chinchilla_lanigera
ENSLAFG00000025950	-	69	49.302	ENSCANG00000029631	-	55	49.302	Colobus_angolensis_palliatus
ENSLAFG00000025950	-	74	49.782	ENSCANG00000037396	NXF5	59	49.782	Colobus_angolensis_palliatus
ENSLAFG00000025950	-	100	52.581	ENSCGRG00001013721	Nxf1	77	52.581	Cricetulus_griseus_chok1gshd
ENSLAFG00000025950	-	100	52.581	ENSCGRG00000013649	Nxf1	79	52.581	Cricetulus_griseus_crigri
ENSLAFG00000025950	-	81	51.969	ENSDORG00000015692	Nxf1	79	56.190	Dipodomys_ordii
ENSLAFG00000025950	-	97	47.020	ENSETEG00000005217	-	50	47.020	Echinops_telfairi
ENSLAFG00000025950	-	94	39.175	ENSETEG00000016159	-	51	38.562	Echinops_telfairi
ENSLAFG00000025950	-	93	41.812	ENSETEG00000008054	-	52	41.812	Echinops_telfairi
ENSLAFG00000025950	-	95	37.162	ENSETEG00000018623	-	50	37.162	Echinops_telfairi
ENSLAFG00000025950	-	62	47.668	ENSETEG00000018628	-	52	47.668	Echinops_telfairi
ENSLAFG00000025950	-	99	45.426	ENSEASG00005010731	-	63	47.445	Equus_asinus_asinus
ENSLAFG00000025950	-	95	44.839	ENSECAG00000011745	-	87	44.839	Equus_caballus
ENSLAFG00000025950	-	100	63.548	ENSECAG00000009360	-	72	63.548	Equus_caballus
ENSLAFG00000025950	-	95	50.164	ENSECAG00000007442	-	54	50.164	Equus_caballus
ENSLAFG00000025950	-	91	52.669	ENSECAG00000001426	NXF1	50	52.669	Equus_caballus
ENSLAFG00000025950	-	100	61.935	ENSECAG00000030830	-	75	61.935	Equus_caballus
ENSLAFG00000025950	-	60	41.176	ENSEEUG00000015582	-	57	41.176	Erinaceus_europaeus
ENSLAFG00000025950	-	94	50.000	ENSFCAG00000013704	-	61	53.386	Felis_catus
ENSLAFG00000025950	-	94	48.630	ENSFCAG00000000605	-	63	51.915	Felis_catus
ENSLAFG00000025950	-	97	52.159	ENSFDAG00000011867	NXF1	76	52.159	Fukomys_damarensis
ENSLAFG00000025950	-	95	47.099	ENSGGOG00000016043	-	62	48.810	Gorilla_gorilla
ENSLAFG00000025950	-	84	40.152	ENSGGOG00000004059	NXF5	60	46.957	Gorilla_gorilla
ENSLAFG00000025950	-	97	52.159	ENSHGLG00000002936	NXF1	80	52.159	Heterocephalus_glaber_female
ENSLAFG00000025950	-	97	52.159	ENSHGLG00100014360	NXF1	80	52.159	Heterocephalus_glaber_male
ENSLAFG00000025950	-	99	50.637	ENSSTOG00000004463	NXF1	77	50.637	Ictidomys_tridecemlineatus
ENSLAFG00000025950	-	94	46.918	ENSMFAG00000044902	-	50	46.975	Macaca_fascicularis
ENSLAFG00000025950	-	76	46.341	ENSMFAG00000031513	-	62	46.341	Macaca_fascicularis
ENSLAFG00000025950	-	97	53.488	ENSMMUG00000000188	NXF1	96	55.714	Macaca_mulatta
ENSLAFG00000025950	-	91	46.975	ENSMMUG00000044155	-	61	49.787	Macaca_mulatta
ENSLAFG00000025950	-	69	46.948	ENSMMUG00000032391	-	59	46.948	Macaca_mulatta
ENSLAFG00000025950	-	96	47.811	ENSMNEG00000044132	-	82	47.811	Macaca_nemestrina
ENSLAFG00000025950	-	76	46.748	ENSMNEG00000029419	-	62	46.748	Macaca_nemestrina
ENSLAFG00000025950	-	97	53.488	ENSMLEG00000026574	NXF1	50	53.488	Mandrillus_leucophaeus
ENSLAFG00000025950	-	95	40.136	ENSMAUG00000019822	Nxf7	50	40.136	Mesocricetus_auratus
ENSLAFG00000025950	-	98	52.787	ENSMAUG00000014572	Nxf1	75	52.787	Mesocricetus_auratus
ENSLAFG00000025950	-	76	51.489	ENSMICG00000045528	-	65	51.489	Microcebus_murinus
ENSLAFG00000025950	-	91	49.110	ENSMICG00000010798	-	97	49.110	Microcebus_murinus
ENSLAFG00000025950	-	100	50.000	ENSMOCG00000000939	Nxf1	78	50.000	Microtus_ochrogaster
ENSLAFG00000025950	-	95	36.824	MGP_CAROLIEiJ_G0033415	Nxf3	80	47.126	Mus_caroli
ENSLAFG00000025950	-	99	50.641	MGP_CAROLIEiJ_G0022651	Nxf1	78	53.394	Mus_caroli
ENSLAFG00000025950	-	95	41.554	MGP_CAROLIEiJ_G0033404	Nxf7	61	42.105	Mus_caroli
ENSLAFG00000025950	-	99	50.000	ENSMUSG00000010097	Nxf1	78	52.941	Mus_musculus
ENSLAFG00000025950	-	88	37.868	ENSMUSG00000057000	Nxf3	61	55.556	Mus_musculus
ENSLAFG00000025950	-	95	42.568	ENSMUSG00000031410	Nxf7	74	37.931	Mus_musculus
ENSLAFG00000025950	-	97	54.153	MGP_PahariEiJ_G0014146	Nxf1	85	54.153	Mus_pahari
ENSLAFG00000025950	-	89	44.364	MGP_PahariEiJ_G0031944	Nxf7	50	44.364	Mus_pahari
ENSLAFG00000025950	-	95	37.162	MGP_PahariEiJ_G0031955	Nxf3	80	48.276	Mus_pahari
ENSLAFG00000025950	-	88	38.235	MGP_SPRETEiJ_G0034583	Nxf3	61	52.381	Mus_spretus
ENSLAFG00000025950	-	95	42.230	MGP_SPRETEiJ_G0034573	Nxf7	74	38.793	Mus_spretus
ENSLAFG00000025950	-	98	52.459	ENSNGAG00000001539	Nxf1	78	52.459	Nannospalax_galili
ENSLAFG00000025950	-	79	48.770	ENSNLEG00000007567	-	61	48.936	Nomascus_leucogenys
ENSLAFG00000025950	-	97	50.166	ENSNLEG00000004123	-	84	50.166	Nomascus_leucogenys
ENSLAFG00000025950	-	95	46.154	ENSNLEG00000007552	-	62	48.413	Nomascus_leucogenys
ENSLAFG00000025950	-	69	48.372	ENSMEUG00000004762	-	61	48.372	Notamacropus_eugenii
ENSLAFG00000025950	-	95	40.476	ENSOPRG00000013662	-	51	40.476	Ochotona_princeps
ENSLAFG00000025950	-	95	43.686	ENSOPRG00000015406	-	50	43.686	Ochotona_princeps
ENSLAFG00000025950	-	100	51.290	ENSODEG00000001620	NXF1	89	51.290	Octodon_degus
ENSLAFG00000025950	-	90	44.803	ENSOGAG00000029188	-	50	44.803	Otolemur_garnettii
ENSLAFG00000025950	-	91	50.709	ENSOGAG00000029761	-	55	50.709	Otolemur_garnettii
ENSLAFG00000025950	-	95	43.919	ENSOGAG00000025402	-	64	43.919	Otolemur_garnettii
ENSLAFG00000025950	-	95	53.716	ENSOGAG00000002202	-	51	53.716	Otolemur_garnettii
ENSLAFG00000025950	-	95	49.488	ENSOARG00000000102	-	54	49.488	Ovis_aries
ENSLAFG00000025950	-	95	48.649	ENSOARG00000002209	-	51	48.649	Ovis_aries
ENSLAFG00000025950	-	91	47.872	ENSPPAG00000042943	-	60	50.000	Pan_paniscus
ENSLAFG00000025950	-	79	47.951	ENSPPAG00000035802	-	59	47.951	Pan_paniscus
ENSLAFG00000025950	-	76	52.766	ENSPPRG00000023923	-	62	52.766	Panthera_pardus
ENSLAFG00000025950	-	94	47.811	ENSPPRG00000005143	-	61	51.793	Panthera_pardus
ENSLAFG00000025950	-	76	53.617	ENSPTIG00000019046	-	63	53.617	Panthera_tigris_altaica
ENSLAFG00000025950	-	94	48.148	ENSPTIG00000019117	-	61	52.191	Panthera_tigris_altaica
ENSLAFG00000025950	-	97	53.488	ENSPTRG00000003791	NXF1	50	53.488	Pan_troglodytes
ENSLAFG00000025950	-	95	47.440	ENSPTRG00000022116	-	62	49.206	Pan_troglodytes
ENSLAFG00000025950	-	76	50.213	ENSPTRG00000041593	NXF5	64	50.213	Pan_troglodytes
ENSLAFG00000025950	-	95	47.440	ENSPTRG00000048802	-	62	49.206	Pan_troglodytes
ENSLAFG00000025950	-	91	46.619	ENSPANG00000029598	-	64	49.362	Papio_anubis
ENSLAFG00000025950	-	95	51.014	ENSPANG00000024672	NXF3	91	45.833	Papio_anubis
ENSLAFG00000025950	-	94	46.575	ENSPANG00000031581	-	60	49.590	Papio_anubis
ENSLAFG00000025950	-	76	46.341	ENSPANG00000008537	-	62	46.341	Papio_anubis
ENSLAFG00000025950	-	97	53.156	ENSPANG00000012132	NXF1	50	53.156	Papio_anubis
ENSLAFG00000025950	-	100	52.258	ENSPEMG00000006139	Nxf1	75	52.258	Peromyscus_maniculatus_bairdii
ENSLAFG00000025950	-	91	50.526	ENSPCIG00000015226	-	50	50.526	Phascolarctos_cinereus
ENSLAFG00000025950	-	94	55.479	ENSPCAG00000001259	-	80	55.479	Procavia_capensis
ENSLAFG00000025950	-	94	47.945	ENSPCOG00000014865	-	85	47.945	Propithecus_coquereli
ENSLAFG00000025950	-	75	49.569	ENSPVAG00000013207	-	59	49.569	Pteropus_vampyrus
ENSLAFG00000025950	-	75	42.308	ENSRNOG00000043306	AABR07040617.1	52	42.308	Rattus_norvegicus
ENSLAFG00000025950	-	97	53.488	ENSRBIG00000042508	NXF1	50	53.488	Rhinopithecus_bieti
ENSLAFG00000025950	-	95	47.099	ENSRROG00000004810	-	60	50.000	Rhinopithecus_roxellana
ENSLAFG00000025950	-	73	47.137	ENSRROG00000002597	NXF5	58	47.807	Rhinopithecus_roxellana
ENSLAFG00000025950	-	97	53.488	ENSRROG00000044145	NXF1	50	53.488	Rhinopithecus_roxellana
ENSLAFG00000025950	-	95	43.197	ENSSBOG00000020886	-	66	47.881	Saimiri_boliviensis_boliviensis
ENSLAFG00000025950	-	95	40.678	ENSSARG00000002390	-	51	40.678	Sorex_araneus
ENSLAFG00000025950	-	80	39.683	ENSSPAG00000007304	zgc:153681	54	36.728	Stegastes_partitus
ENSLAFG00000025950	-	74	50.644	ENSSSCG00000028913	-	55	51.282	Sus_scrofa
ENSLAFG00000025950	-	93	30.034	ENSTNIG00000016801	zgc:153681	56	30.333	Tetraodon_nigroviridis
ENSLAFG00000025950	-	96	44.333	ENSTTRG00000011257	-	84	44.333	Tursiops_truncatus
ENSLAFG00000025950	-	91	48.252	ENSUAMG00000011099	-	56	48.252	Ursus_americanus
ENSLAFG00000025950	-	93	53.310	ENSUAMG00000008363	NXF3	51	53.559	Ursus_americanus
ENSLAFG00000025950	-	95	46.689	ENSUMAG00000000655	-	52	46.689	Ursus_maritimus
ENSLAFG00000025950	-	79	50.813	ENSUMAG00000001030	-	60	50.813	Ursus_maritimus
ENSLAFG00000025950	-	95	47.297	ENSVPAG00000003250	-	58	47.297	Vicugna_pacos
ENSLAFG00000025950	-	95	44.218	ENSVVUG00000011159	-	51	44.218	Vulpes_vulpes