EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000025960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 723 bases
Position: chrscaffold_10:38019656-38020378
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022090	Ribosomal_S5_C	PF03719.15	1.5e-10	1	1
ENSLAFP00000022090	Ribosomal_S5	PF00333.20	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000030959	-	696	-	ENSLAFP00000022090	231 (aa)	-	G3U2N2

Gene Model

Click here to download ENSLAFG00000025960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000025960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000025960	-	72	52.841	ENSLAFG00000025689	-	78	52.841
ENSLAFG00000025960	-	100	39.574	ENSLAFG00000032675	-	81	39.574
ENSLAFG00000025960	-	100	65.145	ENSLAFG00000004696	-	84	65.145
ENSLAFG00000025960	-	100	57.676	ENSLAFG00000025944	-	82	57.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000025960	-	94	41.096	ENSAMEG00000009620	-	100	41.096	Ailuropoda_melanoleuca
ENSLAFG00000025960	-	99	49.367	ENSAMEG00000004788	-	88	49.367	Ailuropoda_melanoleuca
ENSLAFG00000025960	-	100	42.672	ENSANAG00000031734	-	81	69.737	Aotus_nancymaae
ENSLAFG00000025960	-	100	61.702	ENSANAG00000011194	-	89	61.702	Aotus_nancymaae
ENSLAFG00000025960	-	100	48.085	ENSANAG00000024142	-	94	48.085	Aotus_nancymaae
ENSLAFG00000025960	-	78	56.284	ENSANAG00000029384	-	95	56.284	Aotus_nancymaae
ENSLAFG00000025960	-	99	59.833	ENSANAG00000037095	-	90	59.833	Aotus_nancymaae
ENSLAFG00000025960	-	100	58.264	ENSANAG00000032222	-	88	58.264	Aotus_nancymaae
ENSLAFG00000025960	-	100	42.128	ENSCJAG00000035386	-	78	41.277	Callithrix_jacchus
ENSLAFG00000025960	-	100	42.553	ENSCJAG00000000635	-	76	43.830	Callithrix_jacchus
ENSLAFG00000025960	-	100	62.241	ENSCAFG00000017509	-	90	62.241	Canis_familiaris
ENSLAFG00000025960	-	100	59.574	ENSCHIG00000011477	-	94	56.571	Capra_hircus
ENSLAFG00000025960	-	100	61.411	ENSTSYG00000033139	-	95	61.411	Carlito_syrichta
ENSLAFG00000025960	-	100	58.798	ENSTSYG00000031079	-	97	58.798	Carlito_syrichta
ENSLAFG00000025960	-	100	60.759	ENSTSYG00000027421	-	92	60.759	Carlito_syrichta
ENSLAFG00000025960	-	92	54.348	ENSTSYG00000029261	-	87	54.348	Carlito_syrichta
ENSLAFG00000025960	-	94	41.743	ENSTSYG00000034130	-	76	38.532	Carlito_syrichta
ENSLAFG00000025960	-	97	46.581	ENSCPOG00000026421	-	100	46.581	Cavia_porcellus
ENSLAFG00000025960	-	100	57.021	ENSCCAG00000028120	-	94	57.021	Cebus_capucinus
ENSLAFG00000025960	-	100	58.547	ENSCCAG00000020850	-	84	58.547	Cebus_capucinus
ENSLAFG00000025960	-	100	46.383	ENSCCAG00000030295	-	79	47.234	Cebus_capucinus
ENSLAFG00000025960	-	100	54.274	ENSCATG00000036372	-	91	54.274	Cercocebus_atys
ENSLAFG00000025960	-	100	45.957	ENSCATG00000032289	-	76	45.532	Cercocebus_atys
ENSLAFG00000025960	-	100	54.468	ENSCATG00000031773	-	91	54.468	Cercocebus_atys
ENSLAFG00000025960	-	99	56.118	ENSCLAG00000014879	-	99	56.118	Chinchilla_lanigera
ENSLAFG00000025960	-	100	58.750	ENSCLAG00000005355	-	88	58.750	Chinchilla_lanigera
ENSLAFG00000025960	-	99	49.145	ENSCLAG00000011924	-	80	49.145	Chinchilla_lanigera
ENSLAFG00000025960	-	100	52.766	ENSCLAG00000008450	-	91	52.766	Chinchilla_lanigera
ENSLAFG00000025960	-	100	43.265	ENSCLAG00000000810	-	63	57.778	Chinchilla_lanigera
ENSLAFG00000025960	-	97	64.530	ENSCANG00000040571	-	100	64.530	Colobus_angolensis_palliatus
ENSLAFG00000025960	-	100	49.362	ENSCANG00000040877	-	79	41.597	Colobus_angolensis_palliatus
ENSLAFG00000025960	-	100	38.462	ENSCANG00000031673	-	79	38.462	Colobus_angolensis_palliatus
ENSLAFG00000025960	-	100	64.315	ENSCGRG00001009609	-	100	64.315	Cricetulus_griseus_chok1gshd
ENSLAFG00000025960	-	96	46.491	ENSCGRG00001013970	-	93	47.368	Cricetulus_griseus_chok1gshd
ENSLAFG00000025960	-	100	63.485	ENSCGRG00001006245	-	89	63.485	Cricetulus_griseus_chok1gshd
ENSLAFG00000025960	-	100	55.187	ENSCGRG00001022768	-	84	55.187	Cricetulus_griseus_chok1gshd
ENSLAFG00000025960	-	100	55.187	ENSCGRG00000009196	-	84	55.187	Cricetulus_griseus_crigri
ENSLAFG00000025960	-	100	58.506	ENSCGRG00000002188	-	85	58.506	Cricetulus_griseus_crigri
ENSLAFG00000025960	-	96	46.491	ENSCGRG00000006603	-	93	47.368	Cricetulus_griseus_crigri
ENSLAFG00000025960	-	74	46.286	ENSDNOG00000038786	-	80	46.286	Dasypus_novemcinctus
ENSLAFG00000025960	-	73	51.744	ENSDNOG00000045256	-	79	51.744	Dasypus_novemcinctus
ENSLAFG00000025960	-	92	50.450	ENSDNOG00000010490	-	93	46.829	Dasypus_novemcinctus
ENSLAFG00000025960	-	100	51.064	ENSDORG00000030221	-	90	51.064	Dipodomys_ordii
ENSLAFG00000025960	-	99	52.941	ENSDORG00000023277	-	93	48.133	Dipodomys_ordii
ENSLAFG00000025960	-	99	48.945	ENSDORG00000024657	-	92	48.945	Dipodomys_ordii
ENSLAFG00000025960	-	96	54.825	ENSDORG00000025335	-	91	54.825	Dipodomys_ordii
ENSLAFG00000025960	-	97	49.160	ENSDORG00000024425	-	87	49.160	Dipodomys_ordii
ENSLAFG00000025960	-	100	48.333	ENSETEG00000008215	-	85	48.333	Echinops_telfairi
ENSLAFG00000025960	-	100	39.583	ENSEASG00005014316	-	73	39.583	Equus_asinus_asinus
ENSLAFG00000025960	-	84	39.196	ENSEEUG00000013311	-	96	39.196	Erinaceus_europaeus
ENSLAFG00000025960	-	100	33.191	ENSFCAG00000032362	-	80	33.191	Felis_catus
ENSLAFG00000025960	-	100	59.833	ENSFDAG00000003864	-	91	59.833	Fukomys_damarensis
ENSLAFG00000025960	-	91	43.578	ENSHGLG00000007652	-	99	43.578	Heterocephalus_glaber_female
ENSLAFG00000025960	-	100	49.356	ENSHGLG00000007017	-	88	49.356	Heterocephalus_glaber_female
ENSLAFG00000025960	-	91	43.578	ENSHGLG00100005590	-	99	43.578	Heterocephalus_glaber_male
ENSLAFG00000025960	-	100	49.356	ENSHGLG00100002247	-	88	49.356	Heterocephalus_glaber_male
ENSLAFG00000025960	-	92	60.360	ENSHGLG00100021251	-	100	60.360	Heterocephalus_glaber_male
ENSLAFG00000025960	-	100	52.282	ENSJJAG00000021348	-	95	52.282	Jaculus_jaculus
ENSLAFG00000025960	-	82	53.886	ENSJJAG00000009920	-	73	53.886	Jaculus_jaculus
ENSLAFG00000025960	-	100	45.106	ENSMFAG00000033104	-	76	45.532	Macaca_fascicularis
ENSLAFG00000025960	-	97	37.719	ENSMFAG00000038684	-	76	37.719	Macaca_fascicularis
ENSLAFG00000025960	-	100	54.701	ENSMFAG00000036581	-	90	54.701	Macaca_fascicularis
ENSLAFG00000025960	-	100	50.638	ENSMFAG00000040549	-	88	50.638	Macaca_fascicularis
ENSLAFG00000025960	-	100	40.000	ENSMMUG00000015519	-	78	39.574	Macaca_mulatta
ENSLAFG00000025960	-	100	51.064	ENSMMUG00000048399	-	88	51.064	Macaca_mulatta
ENSLAFG00000025960	-	100	45.532	ENSMMUG00000000619	-	77	45.532	Macaca_mulatta
ENSLAFG00000025960	-	100	50.417	ENSMNEG00000031742	-	81	51.261	Macaca_nemestrina
ENSLAFG00000025960	-	100	54.772	ENSMNEG00000032346	-	81	54.772	Macaca_nemestrina
ENSLAFG00000025960	-	100	55.128	ENSMNEG00000014551	-	90	55.128	Macaca_nemestrina
ENSLAFG00000025960	-	100	45.106	ENSMNEG00000042646	-	76	45.106	Macaca_nemestrina
ENSLAFG00000025960	-	100	34.468	ENSMNEG00000003341	-	86	34.043	Macaca_nemestrina
ENSLAFG00000025960	-	100	56.017	ENSMLEG00000029661	-	88	56.017	Mandrillus_leucophaeus
ENSLAFG00000025960	-	100	54.701	ENSMLEG00000032385	-	91	54.701	Mandrillus_leucophaeus
ENSLAFG00000025960	-	100	61.826	ENSMLEG00000037553	-	93	61.826	Mandrillus_leucophaeus
ENSLAFG00000025960	-	100	54.043	ENSMLEG00000043748	-	93	54.043	Mandrillus_leucophaeus
ENSLAFG00000025960	-	100	59.664	ENSMLEG00000041622	-	88	59.664	Mandrillus_leucophaeus
ENSLAFG00000025960	-	77	52.910	ENSMAUG00000000957	-	86	52.910	Mesocricetus_auratus
ENSLAFG00000025960	-	100	55.745	ENSMAUG00000006005	-	94	55.745	Mesocricetus_auratus
ENSLAFG00000025960	-	100	61.826	ENSMAUG00000010957	-	92	61.826	Mesocricetus_auratus
ENSLAFG00000025960	-	100	55.319	ENSMICG00000028319	-	90	55.319	Microcebus_murinus
ENSLAFG00000025960	-	100	48.085	ENSMOCG00000000227	-	67	62.500	Microtus_ochrogaster
ENSLAFG00000025960	-	100	50.424	ENSMOCG00000010657	-	78	50.424	Microtus_ochrogaster
ENSLAFG00000025960	-	61	57.639	ENSMOCG00000010673	-	88	44.017	Microtus_ochrogaster
ENSLAFG00000025960	-	54	53.543	MGP_PahariEiJ_G0017310	-	89	53.543	Mus_pahari
ENSLAFG00000025960	-	99	43.882	ENSMPUG00000015799	-	91	43.882	Mustela_putorius_furo
ENSLAFG00000025960	-	95	50.870	ENSMPUG00000015629	-	94	50.870	Mustela_putorius_furo
ENSLAFG00000025960	-	87	42.584	ENSMPUG00000004669	-	94	42.584	Mustela_putorius_furo
ENSLAFG00000025960	-	96	49.778	ENSMPUG00000000576	-	89	49.778	Mustela_putorius_furo
ENSLAFG00000025960	-	100	52.282	ENSMLUG00000030388	-	92	52.282	Myotis_lucifugus
ENSLAFG00000025960	-	99	49.160	ENSMLUG00000029122	-	100	49.160	Myotis_lucifugus
ENSLAFG00000025960	-	92	44.344	ENSMLUG00000022940	-	99	44.344	Myotis_lucifugus
ENSLAFG00000025960	-	99	57.917	ENSMLUG00000025746	-	100	57.917	Myotis_lucifugus
ENSLAFG00000025960	-	100	55.745	ENSNGAG00000009664	-	84	55.745	Nannospalax_galili
ENSLAFG00000025960	-	92	51.121	ENSNGAG00000013032	-	100	51.121	Nannospalax_galili
ENSLAFG00000025960	-	100	49.583	ENSNLEG00000034998	-	80	49.583	Nomascus_leucogenys
ENSLAFG00000025960	-	100	63.900	ENSNLEG00000032733	-	96	63.900	Nomascus_leucogenys
ENSLAFG00000025960	-	100	50.427	ENSNLEG00000033986	-	90	50.427	Nomascus_leucogenys
ENSLAFG00000025960	-	100	54.741	ENSNLEG00000031715	-	93	47.257	Nomascus_leucogenys
ENSLAFG00000025960	-	100	49.583	ENSNLEG00000031959	-	89	49.583	Nomascus_leucogenys
ENSLAFG00000025960	-	100	62.241	ENSNLEG00000029205	-	90	62.241	Nomascus_leucogenys
ENSLAFG00000025960	-	100	40.598	ENSODEG00000005578	-	77	42.308	Octodon_degus
ENSLAFG00000025960	-	97	48.927	ENSODEG00000003328	-	78	49.356	Octodon_degus
ENSLAFG00000025960	-	100	43.404	ENSODEG00000013571	-	80	43.404	Octodon_degus
ENSLAFG00000025960	-	100	59.751	ENSOCUG00000012731	-	88	59.751	Oryctolagus_cuniculus
ENSLAFG00000025960	-	98	46.753	ENSOCUG00000026818	-	100	46.753	Oryctolagus_cuniculus
ENSLAFG00000025960	-	99	54.978	ENSOCUG00000026627	-	91	55.128	Oryctolagus_cuniculus
ENSLAFG00000025960	-	99	63.445	ENSOCUG00000009140	-	93	63.445	Oryctolagus_cuniculus
ENSLAFG00000025960	-	100	53.138	ENSOGAG00000024844	-	85	53.138	Otolemur_garnettii
ENSLAFG00000025960	-	100	46.581	ENSOARG00000007975	-	89	46.581	Ovis_aries
ENSLAFG00000025960	-	99	47.899	ENSOARG00000016075	-	90	47.899	Ovis_aries
ENSLAFG00000025960	-	100	52.340	ENSPPAG00000039385	-	79	51.489	Pan_paniscus
ENSLAFG00000025960	-	100	56.596	ENSPPAG00000009718	-	87	56.596	Pan_paniscus
ENSLAFG00000025960	-	96	49.327	ENSPPAG00000040669	-	66	67.153	Pan_paniscus
ENSLAFG00000025960	-	100	47.500	ENSPPAG00000029238	-	91	47.500	Pan_paniscus
ENSLAFG00000025960	-	100	64.315	ENSPPAG00000023840	-	95	64.315	Pan_paniscus
ENSLAFG00000025960	-	100	43.220	ENSPTIG00000016889	-	68	61.481	Panthera_tigris_altaica
ENSLAFG00000025960	-	100	42.553	ENSPTRG00000052447	-	80	41.702	Pan_troglodytes
ENSLAFG00000025960	-	100	44.444	ENSPTRG00000045200	-	77	44.444	Pan_troglodytes
ENSLAFG00000025960	-	100	56.596	ENSPTRG00000047742	-	87	56.596	Pan_troglodytes
ENSLAFG00000025960	-	100	63.900	ENSPTRG00000051295	-	95	63.900	Pan_troglodytes
ENSLAFG00000025960	-	97	61.538	ENSPANG00000005237	-	100	61.538	Papio_anubis
ENSLAFG00000025960	-	100	56.017	ENSPANG00000017609	-	94	56.017	Papio_anubis
ENSLAFG00000025960	-	99	49.784	ENSPANG00000033494	-	77	49.784	Papio_anubis
ENSLAFG00000025960	-	100	45.106	ENSPANG00000010731	-	76	45.106	Papio_anubis
ENSLAFG00000025960	-	100	46.383	ENSPCIG00000028447	-	84	46.383	Phascolarctos_cinereus
ENSLAFG00000025960	-	99	47.845	ENSPCIG00000002626	-	92	47.863	Phascolarctos_cinereus
ENSLAFG00000025960	-	97	62.719	ENSPCOG00000013912	-	96	62.719	Propithecus_coquereli
ENSLAFG00000025960	-	100	55.794	ENSPCOG00000002064	-	88	55.794	Propithecus_coquereli
ENSLAFG00000025960	-	96	54.741	ENSPCOG00000014063	-	72	54.741	Propithecus_coquereli
ENSLAFG00000025960	-	100	42.128	ENSRNOG00000030174	AABR07042903.1	81	64.641	Rattus_norvegicus
ENSLAFG00000025960	-	97	38.938	ENSRNOG00000022450	AABR07063975.1	100	38.938	Rattus_norvegicus
ENSLAFG00000025960	-	100	48.718	ENSRBIG00000038037	-	91	48.718	Rhinopithecus_bieti
ENSLAFG00000025960	-	100	53.846	ENSRBIG00000030797	-	86	53.846	Rhinopithecus_bieti
ENSLAFG00000025960	-	99	55.833	ENSRBIG00000028707	-	89	55.833	Rhinopithecus_bieti
ENSLAFG00000025960	-	100	50.855	ENSRBIG00000039210	-	87	50.855	Rhinopithecus_bieti
ENSLAFG00000025960	-	100	55.556	ENSRROG00000039410	-	90	55.556	Rhinopithecus_roxellana
ENSLAFG00000025960	-	99	60.251	ENSRROG00000031151	-	92	60.251	Rhinopithecus_roxellana
ENSLAFG00000025960	-	100	62.979	ENSRROG00000033610	-	85	62.979	Rhinopithecus_roxellana
ENSLAFG00000025960	-	99	55.000	ENSSBOG00000028226	-	91	55.440	Saimiri_boliviensis_boliviensis
ENSLAFG00000025960	-	100	63.445	ENSSBOG00000020329	-	89	63.445	Saimiri_boliviensis_boliviensis
ENSLAFG00000025960	-	97	59.402	ENSSBOG00000010731	-	86	59.402	Saimiri_boliviensis_boliviensis
ENSLAFG00000025960	-	100	41.702	ENSSBOG00000024457	-	81	41.702	Saimiri_boliviensis_boliviensis
ENSLAFG00000025960	-	57	76.923	ENSSBOG00000025337	-	69	76.923	Saimiri_boliviensis_boliviensis
ENSLAFG00000025960	-	99	51.055	ENSSSCG00000033125	-	84	51.055	Sus_scrofa
ENSLAFG00000025960	-	95	34.649	ENSSSCG00000033866	-	89	34.649	Sus_scrofa
ENSLAFG00000025960	-	79	43.684	ENSSSCG00000031475	-	82	43.684	Sus_scrofa
ENSLAFG00000025960	-	99	49.576	ENSSSCG00000031982	-	89	49.576	Sus_scrofa
ENSLAFG00000025960	-	72	62.130	ENSTBEG00000006726	-	100	62.130	Tupaia_belangeri
ENSLAFG00000025960	-	100	50.213	ENSVVUG00000015747	-	74	50.213	Vulpes_vulpes