EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000026032 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 4077 bases
Position: chrscaffold_1:103266879-103270955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018978	PRP21_like_P	PF12230.8	8.6e-20	1	1
ENSLAFP00000018978	Surp	PF01805.20	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000027488	-	2271	-	ENSLAFP00000018978	756 (aa)	-	G3TTS0

Gene Model

Click here to download ENSLAFG00000026032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000026032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000026032	-	98	62.038	ENSLAFG00000000448	SF3A1	98	62.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000026032	-	97	62.468	ENSG00000099995	SF3A1	99	61.750	Homo_sapiens
ENSLAFG00000026032	-	97	56.298	ENSAPOG00000020465	sf3a1	97	56.718	Acanthochromis_polyacanthus
ENSLAFG00000026032	-	97	62.596	ENSAMEG00000007737	SF3A1	99	61.471	Ailuropoda_melanoleuca
ENSLAFG00000026032	-	97	54.949	ENSACIG00000020672	sf3a1	98	56.633	Amphilophus_citrinellus
ENSLAFG00000026032	-	97	56.170	ENSAOCG00000003060	sf3a1	97	56.589	Amphiprion_ocellaris
ENSLAFG00000026032	-	97	56.298	ENSAPEG00000010735	sf3a1	97	56.718	Amphiprion_percula
ENSLAFG00000026032	-	97	55.969	ENSATEG00000021201	sf3a1	97	56.163	Anabas_testudineus
ENSLAFG00000026032	-	96	59.527	ENSAPLG00000009057	SF3A1	99	59.610	Anas_platyrhynchos
ENSLAFG00000026032	-	99	56.127	ENSACAG00000009415	SF3A1	99	56.158	Anolis_carolinensis
ENSLAFG00000026032	-	97	62.468	ENSANAG00000032045	SF3A1	98	62.038	Aotus_nancymaae
ENSLAFG00000026032	-	97	55.471	ENSACLG00000012622	sf3a1	98	56.394	Astatotilapia_calliptera
ENSLAFG00000026032	-	98	55.038	ENSAMXG00000005382	sf3a1	99	55.949	Astyanax_mexicanus
ENSLAFG00000026032	-	98	62.166	ENSBTAG00000003390	SF3A1	98	62.166	Bos_taurus
ENSLAFG00000026032	-	70	32.169	WBGene00004188	prp-21	77	31.985	Caenorhabditis_elegans
ENSLAFG00000026032	-	98	61.911	ENSCJAG00000010370	SF3A1	98	61.911	Callithrix_jacchus
ENSLAFG00000026032	-	98	62.166	ENSCAFG00000012559	SF3A1	98	62.038	Canis_familiaris
ENSLAFG00000026032	-	98	62.166	ENSCAFG00020000838	SF3A1	98	62.038	Canis_lupus_dingo
ENSLAFG00000026032	-	98	62.166	ENSCHIG00000018642	SF3A1	98	62.166	Capra_hircus
ENSLAFG00000026032	-	97	62.725	ENSTSYG00000004739	SF3A1	98	62.293	Carlito_syrichta
ENSLAFG00000026032	-	90	53.015	ENSCAPG00000015414	SF3A1	94	53.717	Cavia_aperea
ENSLAFG00000026032	-	98	62.038	ENSCPOG00000014589	SF3A1	98	61.911	Cavia_porcellus
ENSLAFG00000026032	-	97	62.468	ENSCCAG00000032006	SF3A1	98	62.038	Cebus_capucinus
ENSLAFG00000026032	-	98	62.038	ENSCATG00000029241	SF3A1	98	62.420	Cercocebus_atys
ENSLAFG00000026032	-	97	62.211	ENSCLAG00000006508	SF3A1	98	62.293	Chinchilla_lanigera
ENSLAFG00000026032	-	98	61.911	ENSCSAG00000009470	SF3A1	98	62.293	Chlorocebus_sabaeus
ENSLAFG00000026032	-	57	66.667	ENSCHOG00000005201	SF3A1	66	66.667	Choloepus_hoffmanni
ENSLAFG00000026032	-	99	57.955	ENSCPBG00000007595	SF3A1	99	57.955	Chrysemys_picta_bellii
ENSLAFG00000026032	-	97	38.041	ENSCING00000008526	-	97	38.284	Ciona_intestinalis
ENSLAFG00000026032	-	97	36.641	ENSCSAVG00000005608	-	91	53.750	Ciona_savignyi
ENSLAFG00000026032	-	98	61.911	ENSCANG00000033564	SF3A1	98	62.293	Colobus_angolensis_palliatus
ENSLAFG00000026032	-	96	61.299	ENSCGRG00001008933	Sf3a1	98	61.401	Cricetulus_griseus_chok1gshd
ENSLAFG00000026032	-	96	61.299	ENSCGRG00000006127	Sf3a1	98	61.401	Cricetulus_griseus_crigri
ENSLAFG00000026032	-	97	55.341	ENSCSEG00000010792	sf3a1	99	55.032	Cynoglossus_semilaevis
ENSLAFG00000026032	-	99	53.817	ENSCVAG00000004560	sf3a1	99	53.942	Cyprinodon_variegatus
ENSLAFG00000026032	-	97	56.016	ENSDARG00000041887	sf3a1	97	56.161	Danio_rerio
ENSLAFG00000026032	-	97	62.564	ENSDNOG00000010629	SF3A1	98	62.008	Dasypus_novemcinctus
ENSLAFG00000026032	-	98	62.420	ENSDORG00000005613	Sf3a1	98	62.293	Dipodomys_ordii
ENSLAFG00000026032	-	81	43.948	FBgn0266917	Sf3a1	83	42.752	Drosophila_melanogaster
ENSLAFG00000026032	-	82	62.500	ENSETEG00000017194	SF3A1	93	62.500	Echinops_telfairi
ENSLAFG00000026032	-	96	46.985	ENSEBUG00000001285	sf3a1	95	47.843	Eptatretus_burgeri
ENSLAFG00000026032	-	98	62.038	ENSEASG00005010254	SF3A1	98	62.038	Equus_asinus_asinus
ENSLAFG00000026032	-	98	62.038	ENSECAG00000023962	SF3A1	98	62.038	Equus_caballus
ENSLAFG00000026032	-	70	78.261	ENSEEUG00000003159	SF3A1	80	78.261	Erinaceus_europaeus
ENSLAFG00000026032	-	97	55.243	ENSELUG00000022578	sf3a1	97	55.385	Esox_lucius
ENSLAFG00000026032	-	98	62.038	ENSFCAG00000011932	SF3A1	98	61.911	Felis_catus
ENSLAFG00000026032	-	96	59.025	ENSFALG00000006944	SF3A1	99	58.365	Ficedula_albicollis
ENSLAFG00000026032	-	97	62.339	ENSFDAG00000009560	SF3A1	98	62.293	Fukomys_damarensis
ENSLAFG00000026032	-	99	53.942	ENSFHEG00000010866	sf3a1	99	55.444	Fundulus_heteroclitus
ENSLAFG00000026032	-	97	54.592	ENSGMOG00000016024	sf3a1	97	54.851	Gadus_morhua
ENSLAFG00000026032	-	96	59.474	ENSGALG00000007937	SF3A1	99	58.764	Gallus_gallus
ENSLAFG00000026032	-	97	54.026	ENSGAFG00000009111	sf3a1	97	55.065	Gambusia_affinis
ENSLAFG00000026032	-	97	55.052	ENSGACG00000011893	sf3a1	96	55.253	Gasterosteus_aculeatus
ENSLAFG00000026032	-	95	57.748	ENSGAGG00000000762	SF3A1	99	58.146	Gopherus_agassizii
ENSLAFG00000026032	-	97	62.468	ENSGGOG00000012631	SF3A1	99	61.750	Gorilla_gorilla
ENSLAFG00000026032	-	97	55.471	ENSHBUG00000015795	sf3a1	98	56.394	Haplochromis_burtoni
ENSLAFG00000026032	-	98	62.038	ENSHGLG00000007907	SF3A1	98	62.038	Heterocephalus_glaber_female
ENSLAFG00000026032	-	98	62.038	ENSHGLG00100013799	SF3A1	98	62.038	Heterocephalus_glaber_male
ENSLAFG00000026032	-	97	54.113	ENSHCOG00000015423	sf3a1	98	54.044	Hippocampus_comes
ENSLAFG00000026032	-	97	54.499	ENSIPUG00000002470	sf3a1	98	55.013	Ictalurus_punctatus
ENSLAFG00000026032	-	98	62.166	ENSSTOG00000013892	SF3A1	98	62.166	Ictidomys_tridecemlineatus
ENSLAFG00000026032	-	97	62.339	ENSJJAG00000022566	Sf3a1	97	62.468	Jaculus_jaculus
ENSLAFG00000026032	-	99	54.068	ENSKMAG00000002400	sf3a1	99	54.819	Kryptolebias_marmoratus
ENSLAFG00000026032	-	97	55.841	ENSLBEG00000022974	sf3a1	97	55.969	Labrus_bergylta
ENSLAFG00000026032	-	97	57.642	ENSLACG00000003565	SF3A1	97	58.625	Latimeria_chalumnae
ENSLAFG00000026032	-	97	56.266	ENSLOCG00000008251	sf3a1	97	57.069	Lepisosteus_oculatus
ENSLAFG00000026032	-	98	61.783	ENSMFAG00000031979	SF3A1	98	62.293	Macaca_fascicularis
ENSLAFG00000026032	-	98	61.783	ENSMMUG00000005547	SF3A1	98	62.293	Macaca_mulatta
ENSLAFG00000026032	-	98	61.656	ENSMNEG00000037229	SF3A1	98	62.166	Macaca_nemestrina
ENSLAFG00000026032	-	98	61.911	ENSMLEG00000041908	SF3A1	98	62.293	Mandrillus_leucophaeus
ENSLAFG00000026032	-	97	56.410	ENSMAMG00000006460	sf3a1	96	56.830	Mastacembelus_armatus
ENSLAFG00000026032	-	97	55.471	ENSMZEG00005009633	sf3a1	98	56.394	Maylandia_zebra
ENSLAFG00000026032	-	96	60.053	ENSMGAG00000001330	SF3A1	99	60.130	Meleagris_gallopavo
ENSLAFG00000026032	-	92	59.079	ENSMAUG00000020317	Sf3a1	99	56.730	Mesocricetus_auratus
ENSLAFG00000026032	-	98	62.038	ENSMICG00000010038	SF3A1	98	62.293	Microcebus_murinus
ENSLAFG00000026032	-	97	61.697	ENSMOCG00000008438	Sf3a1	98	61.656	Microtus_ochrogaster
ENSLAFG00000026032	-	97	54.107	ENSMMOG00000015588	sf3a1	97	54.286	Mola_mola
ENSLAFG00000026032	-	97	61.449	ENSMODG00000009270	SF3A1	97	62.354	Monodelphis_domestica
ENSLAFG00000026032	-	97	55.641	ENSMALG00000000148	sf3a1	99	56.528	Monopterus_albus
ENSLAFG00000026032	-	97	61.727	MGP_CAROLIEiJ_G0016029	Sf3a1	97	62.500	Mus_caroli
ENSLAFG00000026032	-	97	61.727	ENSMUSG00000002129	Sf3a1	97	62.500	Mus_musculus
ENSLAFG00000026032	-	97	61.598	MGP_PahariEiJ_G0016862	Sf3a1	97	62.242	Mus_pahari
ENSLAFG00000026032	-	97	61.727	MGP_SPRETEiJ_G0016870	Sf3a1	97	62.500	Mus_spretus
ENSLAFG00000026032	-	98	62.166	ENSMPUG00000013144	SF3A1	98	62.293	Mustela_putorius_furo
ENSLAFG00000026032	-	98	61.911	ENSMLUG00000002139	SF3A1	98	61.911	Myotis_lucifugus
ENSLAFG00000026032	-	97	62.211	ENSNGAG00000016977	Sf3a1	98	61.783	Nannospalax_galili
ENSLAFG00000026032	-	97	55.412	ENSNBRG00000016642	sf3a1	97	56.347	Neolamprologus_brichardi
ENSLAFG00000026032	-	98	61.911	ENSNLEG00000003686	SF3A1	98	62.293	Nomascus_leucogenys
ENSLAFG00000026032	-	92	54.484	ENSMEUG00000008741	SF3A1	97	53.369	Notamacropus_eugenii
ENSLAFG00000026032	-	97	61.954	ENSOPRG00000016636	SF3A1	98	61.529	Ochotona_princeps
ENSLAFG00000026032	-	97	62.082	ENSODEG00000002571	SF3A1	97	62.468	Octodon_degus
ENSLAFG00000026032	-	97	55.273	ENSONIG00000010848	sf3a1	98	56.066	Oreochromis_niloticus
ENSLAFG00000026032	-	97	62.596	ENSOCUG00000007633	SF3A1	98	62.038	Oryctolagus_cuniculus
ENSLAFG00000026032	-	92	54.804	ENSORLG00000013050	sf3a1	97	55.299	Oryzias_latipes
ENSLAFG00000026032	-	92	54.939	ENSORLG00020003236	sf3a1	92	55.027	Oryzias_latipes_hni
ENSLAFG00000026032	-	97	55.155	ENSORLG00015017411	sf3a1	97	55.627	Oryzias_latipes_hsok
ENSLAFG00000026032	-	97	55.284	ENSOMEG00000013362	sf3a1	97	55.787	Oryzias_melastigma
ENSLAFG00000026032	-	97	62.596	ENSOGAG00000012931	SF3A1	98	62.548	Otolemur_garnettii
ENSLAFG00000026032	-	98	61.509	ENSOARG00000006849	SF3A1	98	61.637	Ovis_aries
ENSLAFG00000026032	-	97	61.795	ENSPPAG00000041790	SF3A1	99	61.146	Pan_paniscus
ENSLAFG00000026032	-	98	62.038	ENSPPRG00000004391	SF3A1	98	61.911	Panthera_pardus
ENSLAFG00000026032	-	97	62.339	ENSPTIG00000000844	SF3A1	99	62.211	Panthera_tigris_altaica
ENSLAFG00000026032	-	97	62.468	ENSPTRG00000014240	SF3A1	99	61.750	Pan_troglodytes
ENSLAFG00000026032	-	98	61.911	ENSPANG00000020772	SF3A1	98	62.293	Papio_anubis
ENSLAFG00000026032	-	76	72.500	ENSPSIG00000012803	SF3A1	98	72.500	Pelodiscus_sinensis
ENSLAFG00000026032	-	97	54.784	ENSPMGG00000023096	sf3a1	99	55.963	Periophthalmus_magnuspinnatus
ENSLAFG00000026032	-	96	61.558	ENSPEMG00000009494	Sf3a1	98	61.656	Peromyscus_maniculatus_bairdii
ENSLAFG00000026032	-	64	56.863	ENSPMAG00000007139	-	92	55.617	Petromyzon_marinus
ENSLAFG00000026032	-	97	61.578	ENSPCIG00000022692	SF3A1	97	62.354	Phascolarctos_cinereus
ENSLAFG00000026032	-	93	51.312	ENSPFOG00000016768	sf3a1	96	52.387	Poecilia_formosa
ENSLAFG00000026032	-	99	53.692	ENSPLAG00000017268	sf3a1	99	54.969	Poecilia_latipinna
ENSLAFG00000026032	-	85	54.815	ENSPMEG00000019811	sf3a1	98	56.334	Poecilia_mexicana
ENSLAFG00000026032	-	99	53.500	ENSPREG00000010347	sf3a1	99	54.843	Poecilia_reticulata
ENSLAFG00000026032	-	98	61.911	ENSPPYG00000011707	SF3A1	98	62.293	Pongo_abelii
ENSLAFG00000026032	-	58	64.050	ENSPCAG00000003266	SF3A1	57	64.050	Procavia_capensis
ENSLAFG00000026032	-	98	61.783	ENSPCOG00000026630	SF3A1	98	61.783	Propithecus_coquereli
ENSLAFG00000026032	-	94	62.069	ENSPVAG00000017719	SF3A1	94	62.069	Pteropus_vampyrus
ENSLAFG00000026032	-	97	55.598	ENSPNYG00000018706	sf3a1	98	56.394	Pundamilia_nyererei
ENSLAFG00000026032	-	97	54.672	ENSPNAG00000003721	sf3a1	98	56.684	Pygocentrus_nattereri
ENSLAFG00000026032	-	97	61.856	ENSRNOG00000005218	Sf3a1	98	62.197	Rattus_norvegicus
ENSLAFG00000026032	-	98	61.911	ENSRBIG00000032167	SF3A1	98	62.293	Rhinopithecus_bieti
ENSLAFG00000026032	-	98	61.911	ENSRROG00000044908	SF3A1	98	62.293	Rhinopithecus_roxellana
ENSLAFG00000026032	-	93	61.642	ENSSBOG00000021960	SF3A1	98	63.368	Saimiri_boliviensis_boliviensis
ENSLAFG00000026032	-	99	58.166	ENSSHAG00000003666	SF3A1	99	59.647	Sarcophilus_harrisii
ENSLAFG00000026032	-	97	54.798	ENSSFOG00015004579	sf3a1	97	56.322	Scleropages_formosus
ENSLAFG00000026032	-	99	53.643	ENSSMAG00000004275	sf3a1	99	53.894	Scophthalmus_maximus
ENSLAFG00000026032	-	98	55.654	ENSSDUG00000022219	sf3a1	98	55.939	Seriola_dumerili
ENSLAFG00000026032	-	98	55.654	ENSSLDG00000012642	sf3a1	98	55.939	Seriola_lalandi_dorsalis
ENSLAFG00000026032	-	97	60.618	ENSSARG00000005960	SF3A1	99	60.489	Sorex_araneus
ENSLAFG00000026032	-	96	58.131	ENSSPUG00000018863	SF3A1	99	58.157	Sphenodon_punctatus
ENSLAFG00000026032	-	97	55.985	ENSSPAG00000011856	sf3a1	97	56.404	Stegastes_partitus
ENSLAFG00000026032	-	98	62.166	ENSSSCG00000010002	SF3A1	98	62.293	Sus_scrofa
ENSLAFG00000026032	-	96	59.843	ENSTGUG00000010547	SF3A1	99	59.922	Taeniopygia_guttata
ENSLAFG00000026032	-	97	53.230	ENSTRUG00000006118	sf3a1	99	53.450	Takifugu_rubripes
ENSLAFG00000026032	-	50	68.750	ENSTNIG00000005713	sf3a1	84	68.750	Tetraodon_nigroviridis
ENSLAFG00000026032	-	98	58.003	ENSTBEG00000012771	SF3A1	98	57.875	Tupaia_belangeri
ENSLAFG00000026032	-	98	62.087	ENSTTRG00000001535	SF3A1	98	62.087	Tursiops_truncatus
ENSLAFG00000026032	-	98	60.787	ENSUAMG00000006750	SF3A1	98	60.660	Ursus_americanus
ENSLAFG00000026032	-	97	62.939	ENSUMAG00000016665	SF3A1	98	62.679	Ursus_maritimus
ENSLAFG00000026032	-	98	62.166	ENSVVUG00000003075	SF3A1	98	62.038	Vulpes_vulpes
ENSLAFG00000026032	-	96	56.579	ENSXETG00000016144	sf3a1	97	57.881	Xenopus_tropicalis
ENSLAFG00000026032	-	99	53.585	ENSXCOG00000015653	sf3a1	98	55.341	Xiphophorus_couchianus
ENSLAFG00000026032	-	99	53.585	ENSXMAG00000002753	sf3a1	98	55.470	Xiphophorus_maculatus