EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000026721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 899 bases
Position: chrscaffold_165:466303-467201
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022201	RRM_3	PF08777.11	8.7e-14	1	1
ENSLAFP00000022201	La	PF05383.17	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031603	-	882	-	ENSLAFP00000022201	294 (aa)	-	G3U2Z3

Gene Model

Click here to download ENSLAFG00000026721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000026721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000026721	-	99	70.530	ENSLAFG00000000867	-	72	70.530
ENSLAFG00000026721	-	99	59.468	ENSLAFG00000028909	-	75	59.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000026721	-	99	69.536	ENSG00000138385	SSB	99	72.269	Homo_sapiens
ENSLAFG00000026721	-	98	42.857	ENSAPOG00000003448	ssb	78	42.857	Acanthochromis_polyacanthus
ENSLAFG00000026721	-	99	69.536	ENSAMEG00000010507	SSB	72	69.536	Ailuropoda_melanoleuca
ENSLAFG00000026721	-	98	44.631	ENSACIG00000001738	ssb	85	50.862	Amphilophus_citrinellus
ENSLAFG00000026721	-	98	43.144	ENSAOCG00000020398	ssb	78	43.144	Amphiprion_ocellaris
ENSLAFG00000026721	-	98	43.144	ENSAPEG00000020395	ssb	78	43.144	Amphiprion_percula
ENSLAFG00000026721	-	97	43.098	ENSATEG00000016884	ssb	74	43.098	Anabas_testudineus
ENSLAFG00000026721	-	99	58.940	ENSAPLG00000006109	SSB	71	58.940	Anas_platyrhynchos
ENSLAFG00000026721	-	99	54.305	ENSACAG00000017008	SSB	74	54.305	Anolis_carolinensis
ENSLAFG00000026721	-	99	67.442	ENSANAG00000027195	-	78	67.442	Aotus_nancymaae
ENSLAFG00000026721	-	98	43.960	ENSACLG00000010798	ssb	78	42.373	Astatotilapia_calliptera
ENSLAFG00000026721	-	96	41.980	ENSAMXG00000012606	ssb	72	41.980	Astyanax_mexicanus
ENSLAFG00000026721	-	99	69.868	ENSBTAG00000008716	SSB	75	69.868	Bos_taurus
ENSLAFG00000026721	-	99	69.205	ENSCJAG00000045073	SSB	84	70.175	Callithrix_jacchus
ENSLAFG00000026721	-	99	69.868	ENSCAFG00000012418	SSB	74	69.868	Canis_familiaris
ENSLAFG00000026721	-	99	69.868	ENSCAFG00020002900	SSB	74	69.868	Canis_lupus_dingo
ENSLAFG00000026721	-	99	68.439	ENSCHIG00000022196	-	76	68.439	Capra_hircus
ENSLAFG00000026721	-	99	69.868	ENSCHIG00000022624	-	75	69.868	Capra_hircus
ENSLAFG00000026721	-	99	69.536	ENSTSYG00000000097	SSB	75	69.536	Carlito_syrichta
ENSLAFG00000026721	-	99	69.868	ENSCPOG00000003338	SSB	75	69.868	Cavia_porcellus
ENSLAFG00000026721	-	99	69.868	ENSCCAG00000035147	SSB	85	71.053	Cebus_capucinus
ENSLAFG00000026721	-	99	51.020	ENSCATG00000042909	-	68	51.020	Cercocebus_atys
ENSLAFG00000026721	-	62	67.016	ENSCATG00000036701	SSB	55	67.016	Cercocebus_atys
ENSLAFG00000026721	-	99	70.199	ENSCLAG00000015617	-	75	70.199	Chinchilla_lanigera
ENSLAFG00000026721	-	51	72.848	ENSCLAG00000004563	-	95	72.848	Chinchilla_lanigera
ENSLAFG00000026721	-	99	65.000	ENSCSAG00000018390	-	76	65.000	Chlorocebus_sabaeus
ENSLAFG00000026721	-	99	69.536	ENSCSAG00000015200	SSB	66	69.536	Chlorocebus_sabaeus
ENSLAFG00000026721	-	99	69.868	ENSCHOG00000007763	SSB	75	69.868	Choloepus_hoffmanni
ENSLAFG00000026721	-	99	60.265	ENSCPBG00000006519	SSB	74	60.265	Chrysemys_picta_bellii
ENSLAFG00000026721	-	99	62.838	ENSCANG00000033240	-	73	62.838	Colobus_angolensis_palliatus
ENSLAFG00000026721	-	99	69.205	ENSCANG00000027695	SSB	75	69.205	Colobus_angolensis_palliatus
ENSLAFG00000026721	-	99	53.821	ENSCANG00000028838	-	69	53.821	Colobus_angolensis_palliatus
ENSLAFG00000026721	-	99	64.356	ENSCGRG00001024831	Ssb	74	64.356	Cricetulus_griseus_chok1gshd
ENSLAFG00000026721	-	99	64.356	ENSCGRG00000005387	Ssb	74	64.356	Cricetulus_griseus_crigri
ENSLAFG00000026721	-	98	44.000	ENSCSEG00000011599	ssb	74	44.746	Cynoglossus_semilaevis
ENSLAFG00000026721	-	98	43.960	ENSCVAG00000021558	ssb	75	43.960	Cyprinodon_variegatus
ENSLAFG00000026721	-	98	41.000	ENSDARG00000029252	ssb	74	41.275	Danio_rerio
ENSLAFG00000026721	-	99	69.205	ENSDNOG00000013450	SSB	75	69.205	Dasypus_novemcinctus
ENSLAFG00000026721	-	99	63.696	ENSDORG00000005543	Ssb	74	63.696	Dipodomys_ordii
ENSLAFG00000026721	-	86	31.439	FBgn0011638	La	66	31.439	Drosophila_melanogaster
ENSLAFG00000026721	-	65	67.164	ENSETEG00000004614	-	52	67.164	Echinops_telfairi
ENSLAFG00000026721	-	97	38.276	ENSEBUG00000001237	ssb	75	38.408	Eptatretus_burgeri
ENSLAFG00000026721	-	99	70.530	ENSEASG00005022835	SSB	75	70.530	Equus_asinus_asinus
ENSLAFG00000026721	-	99	70.530	ENSECAG00000018495	SSB	77	70.530	Equus_caballus
ENSLAFG00000026721	-	98	55.184	ENSEEUG00000008077	SSB	76	55.184	Erinaceus_europaeus
ENSLAFG00000026721	-	98	44.108	ENSELUG00000020929	ssb	74	45.455	Esox_lucius
ENSLAFG00000026721	-	99	69.536	ENSFCAG00000011601	SSB	74	69.536	Felis_catus
ENSLAFG00000026721	-	99	58.609	ENSFALG00000000930	SSB	75	58.609	Ficedula_albicollis
ENSLAFG00000026721	-	99	70.199	ENSFDAG00000000598	SSB	75	70.199	Fukomys_damarensis
ENSLAFG00000026721	-	75	39.640	ENSFHEG00000003268	ssb	73	39.407	Fundulus_heteroclitus
ENSLAFG00000026721	-	95	43.793	ENSGMOG00000002664	ssb	72	43.793	Gadus_morhua
ENSLAFG00000026721	-	99	59.272	ENSGALG00000009677	SSB	75	59.272	Gallus_gallus
ENSLAFG00000026721	-	97	42.712	ENSGAFG00000002749	ssb	73	42.712	Gambusia_affinis
ENSLAFG00000026721	-	98	43.624	ENSGACG00000005107	ssb	74	44.631	Gasterosteus_aculeatus
ENSLAFG00000026721	-	99	59.934	ENSGAGG00000007807	SSB	74	59.934	Gopherus_agassizii
ENSLAFG00000026721	-	99	58.000	ENSGGOG00000024891	-	72	58.000	Gorilla_gorilla
ENSLAFG00000026721	-	98	43.624	ENSHBUG00000006584	ssb	76	43.624	Haplochromis_burtoni
ENSLAFG00000026721	-	99	68.581	ENSHGLG00000005832	-	77	68.581	Heterocephalus_glaber_female
ENSLAFG00000026721	-	61	66.120	ENSHGLG00000001810	-	84	66.120	Heterocephalus_glaber_female
ENSLAFG00000026721	-	51	67.763	ENSHGLG00000011331	-	96	67.763	Heterocephalus_glaber_female
ENSLAFG00000026721	-	99	70.199	ENSHGLG00000017580	-	73	70.199	Heterocephalus_glaber_female
ENSLAFG00000026721	-	99	64.686	ENSHGLG00000004478	-	74	64.686	Heterocephalus_glaber_female
ENSLAFG00000026721	-	51	71.242	ENSHGLG00000018387	-	99	66.942	Heterocephalus_glaber_female
ENSLAFG00000026721	-	51	69.281	ENSHGLG00100007213	-	79	69.281	Heterocephalus_glaber_male
ENSLAFG00000026721	-	52	71.613	ENSHGLG00100014205	-	86	71.613	Heterocephalus_glaber_male
ENSLAFG00000026721	-	99	70.199	ENSHGLG00100003084	-	73	70.199	Heterocephalus_glaber_male
ENSLAFG00000026721	-	50	55.705	ENSHGLG00100008353	-	64	55.705	Heterocephalus_glaber_male
ENSLAFG00000026721	-	99	62.951	ENSHGLG00100008767	-	75	62.951	Heterocephalus_glaber_male
ENSLAFG00000026721	-	97	42.761	ENSHCOG00000019011	ssb	75	42.953	Hippocampus_comes
ENSLAFG00000026721	-	96	42.517	ENSIPUG00000003681	SSB	72	42.517	Ictalurus_punctatus
ENSLAFG00000026721	-	99	70.199	ENSSTOG00000008416	SSB	75	70.199	Ictidomys_tridecemlineatus
ENSLAFG00000026721	-	99	64.356	ENSJJAG00000023158	-	73	64.356	Jaculus_jaculus
ENSLAFG00000026721	-	90	57.621	ENSJJAG00000016250	-	71	57.621	Jaculus_jaculus
ENSLAFG00000026721	-	98	42.617	ENSKMAG00000017317	ssb	75	42.617	Kryptolebias_marmoratus
ENSLAFG00000026721	-	97	42.373	ENSLBEG00000017345	ssb	75	42.373	Labrus_bergylta
ENSLAFG00000026721	-	99	53.795	ENSLACG00000014056	SSB	74	53.974	Latimeria_chalumnae
ENSLAFG00000026721	-	98	51.014	ENSLOCG00000007933	ssb	73	51.014	Lepisosteus_oculatus
ENSLAFG00000026721	-	99	69.205	ENSMFAG00000039066	SSB	84	71.053	Macaca_fascicularis
ENSLAFG00000026721	-	99	60.473	ENSMFAG00000041478	-	83	60.473	Macaca_fascicularis
ENSLAFG00000026721	-	99	62.500	ENSMMUG00000011724	-	72	62.500	Macaca_mulatta
ENSLAFG00000026721	-	99	69.205	ENSMMUG00000023051	SSB	84	71.053	Macaca_mulatta
ENSLAFG00000026721	-	99	45.270	ENSMMUG00000039889	-	69	46.622	Macaca_mulatta
ENSLAFG00000026721	-	99	60.473	ENSMNEG00000034698	-	83	60.473	Macaca_nemestrina
ENSLAFG00000026721	-	99	56.811	ENSMNEG00000028321	SSB	84	71.053	Macaca_nemestrina
ENSLAFG00000026721	-	99	50.680	ENSMLEG00000042644	-	72	50.680	Mandrillus_leucophaeus
ENSLAFG00000026721	-	99	69.205	ENSMLEG00000035717	SSB	87	71.053	Mandrillus_leucophaeus
ENSLAFG00000026721	-	98	44.631	ENSMAMG00000004800	ssb	75	44.631	Mastacembelus_armatus
ENSLAFG00000026721	-	98	43.960	ENSMZEG00005005749	ssb	78	42.373	Maylandia_zebra
ENSLAFG00000026721	-	99	59.272	ENSMGAG00000010328	SSB	97	55.392	Meleagris_gallopavo
ENSLAFG00000026721	-	50	68.000	ENSMAUG00000019529	-	99	68.000	Mesocricetus_auratus
ENSLAFG00000026721	-	99	69.257	ENSMICG00000033304	-	76	69.257	Microcebus_murinus
ENSLAFG00000026721	-	99	69.536	ENSMICG00000028252	-	74	69.536	Microcebus_murinus
ENSLAFG00000026721	-	50	68.000	ENSMOCG00000001823	-	99	68.000	Microtus_ochrogaster
ENSLAFG00000026721	-	99	51.351	ENSMODG00000019271	-	70	51.351	Monodelphis_domestica
ENSLAFG00000026721	-	99	50.680	ENSMODG00000007027	-	70	50.680	Monodelphis_domestica
ENSLAFG00000026721	-	99	61.258	ENSMODG00000008227	-	73	61.258	Monodelphis_domestica
ENSLAFG00000026721	-	98	44.295	ENSMALG00000008045	ssb	72	44.295	Monopterus_albus
ENSLAFG00000026721	-	99	64.356	MGP_CAROLIEiJ_G0023629	-	99	67.760	Mus_caroli
ENSLAFG00000026721	-	99	63.366	ENSMUSG00000068882	Ssb	99	67.760	Mus_musculus
ENSLAFG00000026721	-	99	63.366	MGP_PahariEiJ_G0025081	-	99	67.760	Mus_pahari
ENSLAFG00000026721	-	99	63.366	MGP_SPRETEiJ_G0024551	Ssb	99	67.760	Mus_spretus
ENSLAFG00000026721	-	99	69.868	ENSMPUG00000000785	SSB	75	69.868	Mustela_putorius_furo
ENSLAFG00000026721	-	98	69.799	ENSMLUG00000016316	SSB	72	69.799	Myotis_lucifugus
ENSLAFG00000026721	-	98	43.960	ENSNBRG00000012661	ssb	78	42.373	Neolamprologus_brichardi
ENSLAFG00000026721	-	99	69.536	ENSNLEG00000004958	SSB	85	71.053	Nomascus_leucogenys
ENSLAFG00000026721	-	99	51.987	ENSNLEG00000028754	-	71	51.987	Nomascus_leucogenys
ENSLAFG00000026721	-	81	65.726	ENSMEUG00000001650	-	100	65.726	Notamacropus_eugenii
ENSLAFG00000026721	-	50	70.909	ENSOPRG00000008479	-	69	70.909	Ochotona_princeps
ENSLAFG00000026721	-	50	69.032	ENSOPRG00000008475	-	54	69.032	Ochotona_princeps
ENSLAFG00000026721	-	62	70.652	ENSODEG00000010185	-	99	70.652	Octodon_degus
ENSLAFG00000026721	-	90	70.290	ENSODEG00000004202	-	78	70.290	Octodon_degus
ENSLAFG00000026721	-	51	60.784	ENSODEG00000006639	-	82	60.784	Octodon_degus
ENSLAFG00000026721	-	51	67.974	ENSODEG00000010041	-	93	67.974	Octodon_degus
ENSLAFG00000026721	-	98	44.295	ENSONIG00000008776	ssb	76	44.295	Oreochromis_niloticus
ENSLAFG00000026721	-	99	64.238	ENSOANG00000008543	SSB	75	64.238	Ornithorhynchus_anatinus
ENSLAFG00000026721	-	99	71.192	ENSOCUG00000010396	SSB	75	71.192	Oryctolagus_cuniculus
ENSLAFG00000026721	-	97	45.455	ENSORLG00000017208	ssb	74	45.455	Oryzias_latipes
ENSLAFG00000026721	-	97	45.455	ENSORLG00020022574	ssb	74	45.455	Oryzias_latipes_hni
ENSLAFG00000026721	-	97	45.118	ENSORLG00015016592	ssb	74	45.118	Oryzias_latipes_hsok
ENSLAFG00000026721	-	98	43.813	ENSOMEG00000003193	ssb	75	43.813	Oryzias_melastigma
ENSLAFG00000026721	-	99	67.881	ENSOGAG00000029768	SSB	72	67.881	Otolemur_garnettii
ENSLAFG00000026721	-	99	69.868	ENSOARG00000002906	SSB	75	69.868	Ovis_aries
ENSLAFG00000026721	-	84	63.035	ENSPPAG00000006189	-	70	64.093	Pan_paniscus
ENSLAFG00000026721	-	99	59.797	ENSPPAG00000032427	-	99	64.062	Pan_paniscus
ENSLAFG00000026721	-	99	69.536	ENSPPAG00000042673	SSB	85	71.053	Pan_paniscus
ENSLAFG00000026721	-	99	69.536	ENSPPRG00000006599	SSB	74	69.536	Panthera_pardus
ENSLAFG00000026721	-	99	69.205	ENSPTIG00000011021	SSB	72	69.205	Panthera_tigris_altaica
ENSLAFG00000026721	-	99	55.068	ENSPTRG00000042880	-	71	55.068	Pan_troglodytes
ENSLAFG00000026721	-	99	69.536	ENSPTRG00000012620	SSB	85	71.053	Pan_troglodytes
ENSLAFG00000026721	-	99	69.205	ENSPANG00000007440	SSB	84	71.053	Papio_anubis
ENSLAFG00000026721	-	99	50.340	ENSPANG00000031877	-	70	50.340	Papio_anubis
ENSLAFG00000026721	-	99	51.361	ENSPANG00000034126	-	70	51.171	Papio_anubis
ENSLAFG00000026721	-	98	47.138	ENSPKIG00000019325	ssb	79	46.780	Paramormyrops_kingsleyae
ENSLAFG00000026721	-	99	58.940	ENSPSIG00000002265	SSB	69	59.272	Pelodiscus_sinensis
ENSLAFG00000026721	-	88	41.176	ENSPMGG00000020075	ssb	72	41.176	Periophthalmus_magnuspinnatus
ENSLAFG00000026721	-	50	68.667	ENSPEMG00000021746	-	99	68.667	Peromyscus_maniculatus_bairdii
ENSLAFG00000026721	-	99	39.933	ENSPMAG00000002982	ssb	70	39.933	Petromyzon_marinus
ENSLAFG00000026721	-	99	64.570	ENSPCIG00000028591	-	75	64.570	Phascolarctos_cinereus
ENSLAFG00000026721	-	97	42.712	ENSPFOG00000009650	ssb	74	42.712	Poecilia_formosa
ENSLAFG00000026721	-	97	42.712	ENSPLAG00000020498	ssb	74	42.712	Poecilia_latipinna
ENSLAFG00000026721	-	97	42.712	ENSPMEG00000001051	ssb	74	42.712	Poecilia_mexicana
ENSLAFG00000026721	-	97	42.373	ENSPREG00000003708	ssb	77	42.373	Poecilia_reticulata
ENSLAFG00000026721	-	99	69.536	ENSPPYG00000012919	SSB	75	69.536	Pongo_abelii
ENSLAFG00000026721	-	92	67.616	ENSPCAG00000010276	SSB	73	67.616	Procavia_capensis
ENSLAFG00000026721	-	99	65.563	ENSPCOG00000015741	-	91	66.957	Propithecus_coquereli
ENSLAFG00000026721	-	99	60.000	ENSPCOG00000023189	-	72	60.000	Propithecus_coquereli
ENSLAFG00000026721	-	92	71.174	ENSPVAG00000006615	SSB	80	71.174	Pteropus_vampyrus
ENSLAFG00000026721	-	98	43.960	ENSPNYG00000006444	ssb	78	42.373	Pundamilia_nyererei
ENSLAFG00000026721	-	97	44.108	ENSPNAG00000011708	ssb	73	44.108	Pygocentrus_nattereri
ENSLAFG00000026721	-	99	62.376	ENSRNOG00000011606	AABR07061825.1	75	62.376	Rattus_norvegicus
ENSLAFG00000026721	-	99	63.696	ENSRNOG00000007998	Ssb	73	63.696	Rattus_norvegicus
ENSLAFG00000026721	-	84	66.795	ENSRBIG00000041608	-	74	66.795	Rhinopithecus_bieti
ENSLAFG00000026721	-	99	55.629	ENSRBIG00000041972	SSB	87	71.053	Rhinopithecus_bieti
ENSLAFG00000026721	-	99	45.819	ENSRBIG00000029918	-	68	45.819	Rhinopithecus_bieti
ENSLAFG00000026721	-	91	62.731	ENSRBIG00000041232	-	79	69.048	Rhinopithecus_bieti
ENSLAFG00000026721	-	84	66.795	ENSRROG00000034102	-	72	62.116	Rhinopithecus_roxellana
ENSLAFG00000026721	-	96	63.066	ENSRROG00000031684	-	84	67.606	Rhinopithecus_roxellana
ENSLAFG00000026721	-	99	55.150	ENSRROG00000007149	-	71	55.150	Rhinopithecus_roxellana
ENSLAFG00000026721	-	99	69.205	ENSRROG00000040346	SSB	84	71.053	Rhinopithecus_roxellana
ENSLAFG00000026721	-	99	69.868	ENSSBOG00000027204	SSB	85	71.053	Saimiri_boliviensis_boliviensis
ENSLAFG00000026721	-	99	65.232	ENSSHAG00000018062	SSB	74	65.232	Sarcophilus_harrisii
ENSLAFG00000026721	-	96	48.805	ENSSFOG00015000550	ssb	72	50.171	Scleropages_formosus
ENSLAFG00000026721	-	98	42.282	ENSSMAG00000013885	ssb	80	42.282	Scophthalmus_maximus
ENSLAFG00000026721	-	98	43.624	ENSSDUG00000020117	ssb	75	43.624	Seriola_dumerili
ENSLAFG00000026721	-	98	42.662	ENSSLDG00000002525	ssb	74	42.662	Seriola_lalandi_dorsalis
ENSLAFG00000026721	-	92	59.786	ENSSARG00000007747	SSB	73	59.786	Sorex_araneus
ENSLAFG00000026721	-	99	58.940	ENSSPUG00000012112	SSB	74	58.940	Sphenodon_punctatus
ENSLAFG00000026721	-	98	42.953	ENSSPAG00000005696	ssb	78	42.953	Stegastes_partitus
ENSLAFG00000026721	-	99	64.238	ENSSSCG00000015938	SSB	75	64.570	Sus_scrofa
ENSLAFG00000026721	-	99	58.609	ENSTGUG00000007942	SSB	74	58.609	Taeniopygia_guttata
ENSLAFG00000026721	-	98	44.295	ENSTRUG00000017839	ssb	75	44.295	Takifugu_rubripes
ENSLAFG00000026721	-	98	43.624	ENSTNIG00000000915	ssb	84	43.624	Tetraodon_nigroviridis
ENSLAFG00000026721	-	74	71.053	ENSTBEG00000009056	SSB	54	71.053	Tupaia_belangeri
ENSLAFG00000026721	-	99	68.874	ENSTTRG00000002152	SSB	74	68.874	Tursiops_truncatus
ENSLAFG00000026721	-	99	70.199	ENSUAMG00000027833	SSB	79	70.199	Ursus_americanus
ENSLAFG00000026721	-	99	70.199	ENSUMAG00000013907	SSB	74	70.199	Ursus_maritimus
ENSLAFG00000026721	-	99	69.536	ENSVPAG00000007183	SSB	75	69.536	Vicugna_pacos
ENSLAFG00000026721	-	99	70.100	ENSVVUG00000016573	SSB	58	70.100	Vulpes_vulpes
ENSLAFG00000026721	-	99	48.675	ENSXETG00000025402	ssb	71	48.675	Xenopus_tropicalis
ENSLAFG00000026721	-	97	42.177	ENSXCOG00000019109	ssb	83	50.877	Xiphophorus_couchianus
ENSLAFG00000026721	-	97	43.051	ENSXMAG00000004888	ssb	73	43.051	Xiphophorus_maculatus