EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000027033 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 94109 bases
Position: chrscaffold_1:70453020-70547128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000017996	MMR_HSR1	PF01926.23	6.2e-16	1	2
ENSLAFP00000017996	MMR_HSR1	PF01926.23	6.2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000028204	-	3924	-	ENSLAFP00000017996	1308 (aa)	-	G3TQY8

Gene Model

Click here to download ENSLAFG00000027033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000027033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000027033	-	50	88.319	ENSLAFG00000031011	-	89	88.319
ENSLAFG00000027033	-	51	63.295	ENSLAFG00000029002	-	53	63.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000027033	-	50	50.296	ENSAMEG00000018886	-	82	50.296	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	50	61.823	ENSAMEG00000004488	-	85	61.823	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	51	57.923	ENSAMEG00000019320	-	87	57.923	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	50	56.509	ENSAMEG00000001281	-	80	56.509	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	51	59.016	ENSAMEG00000018526	-	87	59.016	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	51	59.563	ENSAMEG00000018904	-	87	59.563	Ailuropoda_melanoleuca
ENSLAFG00000027033	-	51	45.783	ENSACAG00000005249	-	86	45.783	Anolis_carolinensis
ENSLAFG00000027033	-	50	32.857	ENSACAG00000022806	-	83	32.857	Anolis_carolinensis
ENSLAFG00000027033	-	50	38.978	ENSAMXG00000003370	-	91	38.978	Astyanax_mexicanus
ENSLAFG00000027033	-	51	58.726	ENSCAFG00000012657	-	83	58.726	Canis_familiaris
ENSLAFG00000027033	-	50	56.637	ENSCAFG00000028829	-	83	56.805	Canis_familiaris
ENSLAFG00000027033	-	51	57.923	ENSCAFG00000000498	-	83	57.923	Canis_familiaris
ENSLAFG00000027033	-	51	57.923	ENSCAFG00020002399	-	83	57.923	Canis_lupus_dingo
ENSLAFG00000027033	-	51	58.726	ENSCAFG00020002248	-	83	58.726	Canis_lupus_dingo
ENSLAFG00000027033	-	52	43.768	ENSCHIG00000006767	-	85	43.768	Capra_hircus
ENSLAFG00000027033	-	50	49.854	ENSCAPG00000016904	-	84	49.854	Cavia_aperea
ENSLAFG00000027033	-	50	43.716	ENSCPOG00000034856	-	88	43.716	Cavia_porcellus
ENSLAFG00000027033	-	50	51.499	ENSCPOG00000039847	-	86	51.499	Cavia_porcellus
ENSLAFG00000027033	-	51	45.763	ENSCPOG00000037647	-	85	45.833	Cavia_porcellus
ENSLAFG00000027033	-	50	52.342	ENSCPOG00000036108	-	85	52.342	Cavia_porcellus
ENSLAFG00000027033	-	50	48.286	ENSCLAG00000017958	-	84	48.286	Chinchilla_lanigera
ENSLAFG00000027033	-	51	59.780	ENSCLAG00000010051	-	82	59.780	Chinchilla_lanigera
ENSLAFG00000027033	-	50	59.366	ENSCLAG00000011265	-	87	59.366	Chinchilla_lanigera
ENSLAFG00000027033	-	52	55.145	ENSCLAG00000017811	-	89	55.145	Chinchilla_lanigera
ENSLAFG00000027033	-	50	39.617	ENSCPBG00000002066	-	80	39.617	Chrysemys_picta_bellii
ENSLAFG00000027033	-	51	46.269	ENSCPBG00000016818	-	81	47.742	Chrysemys_picta_bellii
ENSLAFG00000027033	-	50	41.274	ENSCPBG00000021938	-	84	41.274	Chrysemys_picta_bellii
ENSLAFG00000027033	-	50	45.190	ENSCPBG00000010054	-	83	45.190	Chrysemys_picta_bellii
ENSLAFG00000027033	-	50	39.017	ENSCPBG00000016826	-	78	39.017	Chrysemys_picta_bellii
ENSLAFG00000027033	-	73	48.968	ENSCGRG00001015722	Igtp	80	48.968	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	51	56.695	ENSCGRG00001022428	-	85	56.695	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	50	46.386	ENSCGRG00001001682	Ifi47	88	46.386	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	52	51.099	ENSCGRG00001022150	-	88	51.099	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	52	55.615	ENSCGRG00001002378	-	92	55.615	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	51	56.986	ENSCGRG00001003754	-	88	56.986	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	51	53.571	ENSCGRG00001007108	-	87	53.571	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	52	53.333	ENSCGRG00001011027	-	87	53.333	Cricetulus_griseus_chok1gshd
ENSLAFG00000027033	-	51	54.728	ENSCGRG00000007258	-	83	54.728	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	51	56.695	ENSCGRG00000008370	-	85	56.695	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	51	53.571	ENSCGRG00000019836	-	87	53.571	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	52	53.333	ENSCGRG00000018822	-	87	53.333	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	52	51.648	ENSCGRG00000016337	-	87	51.923	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	73	48.673	ENSCGRG00000003709	Igtp	80	48.673	Cricetulus_griseus_crigri
ENSLAFG00000027033	-	52	61.212	ENSDNOG00000045232	-	83	61.212	Dasypus_novemcinctus
ENSLAFG00000027033	-	50	51.989	ENSDNOG00000041589	-	85	51.989	Dasypus_novemcinctus
ENSLAFG00000027033	-	50	55.402	ENSDNOG00000037309	-	82	55.402	Dasypus_novemcinctus
ENSLAFG00000027033	-	51	47.592	ENSDNOG00000046683	-	84	47.592	Dasypus_novemcinctus
ENSLAFG00000027033	-	52	48.179	ENSDNOG00000047478	-	84	48.179	Dasypus_novemcinctus
ENSLAFG00000027033	-	51	46.224	ENSELUG00000003864	irgf3	83	46.224	Esox_lucius
ENSLAFG00000027033	-	51	45.042	ENSFDAG00000010234	-	85	45.042	Fukomys_damarensis
ENSLAFG00000027033	-	50	53.678	ENSFDAG00000012257	-	73	53.678	Fukomys_damarensis
ENSLAFG00000027033	-	52	61.813	ENSFDAG00000010714	-	88	61.813	Fukomys_damarensis
ENSLAFG00000027033	-	50	42.149	ENSGAGG00000002085	-	92	42.149	Gopherus_agassizii
ENSLAFG00000027033	-	50	41.261	ENSGAGG00000011616	-	81	41.261	Gopherus_agassizii
ENSLAFG00000027033	-	50	53.061	ENSHGLG00000013108	-	82	53.061	Heterocephalus_glaber_female
ENSLAFG00000027033	-	51	58.242	ENSHGLG00000007116	-	88	58.242	Heterocephalus_glaber_female
ENSLAFG00000027033	-	52	56.676	ENSHGLG00000017987	-	80	56.676	Heterocephalus_glaber_female
ENSLAFG00000027033	-	51	58.242	ENSHGLG00100015640	-	88	58.242	Heterocephalus_glaber_male
ENSLAFG00000027033	-	52	56.868	ENSHGLG00100020590	-	86	56.868	Heterocephalus_glaber_male
ENSLAFG00000027033	-	50	52.770	ENSHGLG00100006680	-	82	52.770	Heterocephalus_glaber_male
ENSLAFG00000027033	-	50	41.972	ENSIPUG00000019864	-	87	41.972	Ictalurus_punctatus
ENSLAFG00000027033	-	50	41.972	ENSIPUG00000019872	IRGC	87	41.972	Ictalurus_punctatus
ENSLAFG00000027033	-	50	60.822	ENSSTOG00000024119	-	88	60.822	Ictidomys_tridecemlineatus
ENSLAFG00000027033	-	51	54.795	ENSSTOG00000030572	-	89	54.795	Ictidomys_tridecemlineatus
ENSLAFG00000027033	-	50	58.239	ENSJJAG00000023378	-	96	64.341	Jaculus_jaculus
ENSLAFG00000027033	-	50	43.003	ENSLBEG00000024117	-	81	46.602	Labrus_bergylta
ENSLAFG00000027033	-	50	43.279	ENSLACG00000016344	-	90	43.279	Latimeria_chalumnae
ENSLAFG00000027033	-	77	50.779	ENSMAUG00000010911	Igtp	83	50.779	Mesocricetus_auratus
ENSLAFG00000027033	-	51	65.479	ENSMICG00000045819	-	87	65.479	Microcebus_murinus
ENSLAFG00000027033	-	51	63.866	ENSMICG00000046828	-	86	63.866	Microcebus_murinus
ENSLAFG00000027033	-	50	53.161	ENSMOCG00000009734	Irgm1	84	53.161	Microtus_ochrogaster
ENSLAFG00000027033	-	50	57.429	ENSMOCG00000016393	-	78	57.429	Microtus_ochrogaster
ENSLAFG00000027033	-	68	49.688	ENSMOCG00000014171	Igtp	76	49.688	Microtus_ochrogaster
ENSLAFG00000027033	-	52	49.361	ENSMODG00000013291	-	93	49.361	Monodelphis_domestica
ENSLAFG00000027033	-	51	52.747	MGP_CAROLIEiJ_G0022303	Iigp1	96	52.747	Mus_caroli
ENSLAFG00000027033	-	51	56.125	MGP_CAROLIEiJ_G0016257	-	85	56.125	Mus_caroli
ENSLAFG00000027033	-	51	48.907	MGP_CAROLIEiJ_G0016258	9930111J21Rik2	78	48.907	Mus_caroli
ENSLAFG00000027033	-	60	46.313	MGP_CAROLIEiJ_G0016388	-	77	46.313	Mus_caroli
ENSLAFG00000027033	-	51	57.265	ENSMUSG00000058163	Gm5431	85	57.265	Mus_musculus
ENSLAFG00000027033	-	51	51.923	ENSMUSG00000054072	Iigp1	88	51.923	Mus_musculus
ENSLAFG00000027033	-	51	56.980	ENSMUSG00000069892	9930111J21Rik2	100	52.000	Mus_musculus
ENSLAFG00000027033	-	51	56.695	ENSMUSG00000069893	9930111J21Rik1	100	52.000	Mus_musculus
ENSLAFG00000027033	-	50	58.507	ENSMUSG00000048852	Gm12185	85	57.550	Mus_musculus
ENSLAFG00000027033	-	51	49.041	ENSMUSG00000073555	Gm4951	88	49.041	Mus_musculus
ENSLAFG00000027033	-	50	55.132	ENSMUSG00000046879	Irgm1	84	55.060	Mus_musculus
ENSLAFG00000027033	-	50	56.620	ENSMUSG00000068606	Gm4841	88	56.557	Mus_musculus
ENSLAFG00000027033	-	76	51.505	ENSMUSG00000078853	Igtp	95	51.505	Mus_musculus
ENSLAFG00000027033	-	62	47.826	ENSMUSG00000069874	Irgm2	86	47.923	Mus_musculus
ENSLAFG00000027033	-	50	54.596	ENSMUSG00000090942	F830016B08Rik	86	54.596	Mus_musculus
ENSLAFG00000027033	-	61	54.252	MGP_PahariEiJ_G0017392	Irgm1	100	55.137	Mus_pahari
ENSLAFG00000027033	-	63	47.706	MGP_PahariEiJ_G0017523	-	81	47.706	Mus_pahari
ENSLAFG00000027033	-	65	46.429	MGP_SPRETEiJ_G0017230	Irgm2	87	46.429	Mus_spretus
ENSLAFG00000027033	-	76	51.678	MGP_SPRETEiJ_G0017229	Igtp	95	51.678	Mus_spretus
ENSLAFG00000027033	-	50	54.839	MGP_SPRETEiJ_G0017097	Irgm1	100	56.507	Mus_spretus
ENSLAFG00000027033	-	50	59.729	MGP_SPRETEiJ_G0017098	-	82	57.806	Mus_spretus
ENSLAFG00000027033	-	50	46.995	MGP_SPRETEiJ_G0017099	9930111J21Rik2	92	51.124	Mus_spretus
ENSLAFG00000027033	-	50	59.729	MGP_SPRETEiJ_G0017100	-	82	57.806	Mus_spretus
ENSLAFG00000027033	-	50	59.729	MGP_SPRETEiJ_G0017101	-	82	57.806	Mus_spretus
ENSLAFG00000027033	-	52	55.313	ENSMPUG00000000575	-	84	55.591	Mustela_putorius_furo
ENSLAFG00000027033	-	51	54.179	ENSNGAG00000021197	-	89	54.179	Nannospalax_galili
ENSLAFG00000027033	-	61	58.929	ENSNGAG00000013043	Irgm1	84	58.929	Nannospalax_galili
ENSLAFG00000027033	-	51	59.544	ENSNGAG00000021829	-	85	59.544	Nannospalax_galili
ENSLAFG00000027033	-	51	64.387	ENSOCUG00000024432	-	84	64.387	Oryctolagus_cuniculus
ENSLAFG00000027033	-	50	67.483	ENSOGAG00000028713	-	81	67.483	Otolemur_garnettii
ENSLAFG00000027033	-	50	40.267	ENSPKIG00000012507	-	93	40.267	Paramormyrops_kingsleyae
ENSLAFG00000027033	-	61	53.959	ENSPEMG00000018645	Irgm1	82	53.959	Peromyscus_maniculatus_bairdii
ENSLAFG00000027033	-	52	58.405	ENSPEMG00000015679	-	100	52.000	Peromyscus_maniculatus_bairdii
ENSLAFG00000027033	-	51	54.521	ENSPEMG00000011957	-	88	54.521	Peromyscus_maniculatus_bairdii
ENSLAFG00000027033	-	52	50.275	ENSPCIG00000025896	-	88	50.275	Phascolarctos_cinereus
ENSLAFG00000027033	-	50	53.614	ENSPCIG00000025897	-	88	53.614	Phascolarctos_cinereus
ENSLAFG00000027033	-	51	55.495	ENSRNOG00000048302	LOC100910979	96	55.495	Rattus_norvegicus
ENSLAFG00000027033	-	51	56.410	ENSRNOG00000032396	RGD1559575	85	56.410	Rattus_norvegicus
ENSLAFG00000027033	-	53	53.723	ENSRNOG00000038955	MGC105567	91	53.723	Rattus_norvegicus
ENSLAFG00000027033	-	50	52.874	ENSRNOG00000031138	Irgm	84	52.874	Rattus_norvegicus
ENSLAFG00000027033	-	51	55.220	ENSRNOG00000038960	RGD1309362	87	55.220	Rattus_norvegicus
ENSLAFG00000027033	-	51	55.220	ENSRNOG00000049893	LOC100910934	87	55.220	Rattus_norvegicus
ENSLAFG00000027033	-	51	54.945	ENSRNOG00000046839	LOC102555392	87	54.945	Rattus_norvegicus
ENSLAFG00000027033	-	99	40.335	ENSRNOG00000027008	Igtp	93	40.274	Rattus_norvegicus
ENSLAFG00000027033	-	51	55.495	ENSRNOG00000019542	LOC100910979	87	55.495	Rattus_norvegicus
ENSLAFG00000027033	-	50	41.096	ENSSPUG00000015920	-	90	41.096	Sphenodon_punctatus
ENSLAFG00000027033	-	50	61.017	ENSUAMG00000010853	-	82	61.017	Ursus_americanus
ENSLAFG00000027033	-	50	49.560	ENSUAMG00000013638	-	83	49.560	Ursus_americanus
ENSLAFG00000027033	-	51	60.218	ENSUAMG00000013643	-	86	60.218	Ursus_americanus
ENSLAFG00000027033	-	51	61.496	ENSUMAG00000025022	-	82	61.496	Ursus_maritimus
ENSLAFG00000027033	-	50	56.928	ENSUMAG00000009713	-	83	56.928	Ursus_maritimus
ENSLAFG00000027033	-	51	59.290	ENSUMAG00000025018	-	83	59.290	Ursus_maritimus
ENSLAFG00000027033	-	51	59.836	ENSUMAG00000009716	-	88	59.836	Ursus_maritimus
ENSLAFG00000027033	-	50	50.459	ENSVVUG00000002750	-	94	44.691	Vulpes_vulpes
ENSLAFG00000027033	-	51	58.743	ENSVVUG00000026931	-	66	58.743	Vulpes_vulpes
ENSLAFG00000027033	-	50	57.273	ENSVVUG00000002784	-	83	57.273	Vulpes_vulpes
ENSLAFG00000027033	-	52	59.003	ENSVVUG00000002740	-	82	59.003	Vulpes_vulpes
ENSLAFG00000027033	-	51	57.064	ENSVVUG00000026929	-	82	57.064	Vulpes_vulpes