EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000027745 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 492 bases
Position: chrscaffold_3:57639865-57640356
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024083	cwf18	PF08315.12	9.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000030878	-	474	-	ENSLAFP00000024083	157 (aa)	-	G3U8C5

Gene Model

Click here to download ENSLAFG00000027745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000027745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000027745	-	71	95.536	ENSLAFG00000022573	-	98	95.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000027745	-	100	86.503	ENSG00000160799	CCDC12	98	86.503	Homo_sapiens
ENSLAFG00000027745	-	98	68.323	ENSAPOG00000014426	ccdc12	59	68.323	Acanthochromis_polyacanthus
ENSLAFG00000027745	-	100	88.957	ENSAMEG00000012658	CCDC12	98	88.957	Ailuropoda_melanoleuca
ENSLAFG00000027745	-	76	74.167	ENSACIG00000022676	-	81	75.439	Amphilophus_citrinellus
ENSLAFG00000027745	-	72	75.221	ENSACIG00000015192	ccdc12	80	75.221	Amphilophus_citrinellus
ENSLAFG00000027745	-	97	68.750	ENSAOCG00000024127	ccdc12	95	68.750	Amphiprion_ocellaris
ENSLAFG00000027745	-	98	68.323	ENSAPEG00000009155	ccdc12	84	68.323	Amphiprion_percula
ENSLAFG00000027745	-	85	69.925	ENSATEG00000004807	ccdc12	99	69.403	Anabas_testudineus
ENSLAFG00000027745	-	87	70.290	ENSAPLG00000005482	CCDC12	100	69.565	Anas_platyrhynchos
ENSLAFG00000027745	-	100	70.833	ENSACAG00000004727	CCDC12	86	70.238	Anolis_carolinensis
ENSLAFG00000027745	-	85	91.045	ENSANAG00000024483	CCDC12	100	91.045	Aotus_nancymaae
ENSLAFG00000027745	-	95	58.333	ENSACLG00000012742	-	96	58.333	Astatotilapia_calliptera
ENSLAFG00000027745	-	98	67.081	ENSACLG00000005356	ccdc12	98	67.081	Astatotilapia_calliptera
ENSLAFG00000027745	-	98	66.460	ENSAMXG00000016319	ccdc12	98	66.875	Astyanax_mexicanus
ENSLAFG00000027745	-	100	84.848	ENSBTAG00000011311	CCDC12	98	86.667	Bos_taurus
ENSLAFG00000027745	-	81	40.769	WBGene00022092	Y69A2AR.21	69	40.476	Caenorhabditis_elegans
ENSLAFG00000027745	-	100	87.730	ENSCJAG00000002280	CCDC12	98	87.730	Callithrix_jacchus
ENSLAFG00000027745	-	100	89.571	ENSCAFG00000013588	CCDC12	98	89.571	Canis_familiaris
ENSLAFG00000027745	-	100	89.571	ENSCAFG00020014024	CCDC12	91	89.571	Canis_lupus_dingo
ENSLAFG00000027745	-	100	84.242	ENSCHIG00000014512	CCDC12	98	86.061	Capra_hircus
ENSLAFG00000027745	-	100	85.890	ENSTSYG00000032837	CCDC12	98	85.890	Carlito_syrichta
ENSLAFG00000027745	-	85	71.642	ENSCAPG00000007935	CCDC12	100	71.642	Cavia_aperea
ENSLAFG00000027745	-	100	87.730	ENSCPOG00000032515	CCDC12	98	87.730	Cavia_porcellus
ENSLAFG00000027745	-	100	87.730	ENSCCAG00000020126	CCDC12	91	87.730	Cebus_capucinus
ENSLAFG00000027745	-	100	70.659	ENSCATG00000033681	CCDC12	91	70.659	Cercocebus_atys
ENSLAFG00000027745	-	100	87.730	ENSCLAG00000016013	CCDC12	98	87.730	Chinchilla_lanigera
ENSLAFG00000027745	-	100	86.503	ENSCSAG00000016154	CCDC12	91	86.503	Chlorocebus_sabaeus
ENSLAFG00000027745	-	100	71.515	ENSCPBG00000015804	CCDC12	79	71.515	Chrysemys_picta_bellii
ENSLAFG00000027745	-	84	51.852	ENSCING00000005261	-	81	50.370	Ciona_intestinalis
ENSLAFG00000027745	-	100	86.503	ENSCANG00000020857	CCDC12	91	86.503	Colobus_angolensis_palliatus
ENSLAFG00000027745	-	100	85.890	ENSCGRG00001000459	Ccdc12	98	85.890	Cricetulus_griseus_chok1gshd
ENSLAFG00000027745	-	100	85.890	ENSCGRG00000012816	Ccdc12	98	85.890	Cricetulus_griseus_crigri
ENSLAFG00000027745	-	93	67.320	ENSCSEG00000004543	ccdc12	94	67.320	Cynoglossus_semilaevis
ENSLAFG00000027745	-	85	69.403	ENSCVAG00000011342	ccdc12	99	69.403	Cyprinodon_variegatus
ENSLAFG00000027745	-	97	65.000	ENSDARG00000023003	ccdc12	98	65.000	Danio_rerio
ENSLAFG00000027745	-	99	76.250	ENSDORG00000024399	-	97	76.250	Dipodomys_ordii
ENSLAFG00000027745	-	99	86.250	ENSDORG00000016567	-	97	86.250	Dipodomys_ordii
ENSLAFG00000027745	-	94	43.624	FBgn0039732	CG15525	89	43.624	Drosophila_melanogaster
ENSLAFG00000027745	-	66	82.569	ENSETEG00000000030	CCDC12	96	82.569	Echinops_telfairi
ENSLAFG00000027745	-	100	57.764	ENSEBUG00000005674	ccdc12	100	58.896	Eptatretus_burgeri
ENSLAFG00000027745	-	100	87.117	ENSEASG00005008148	-	68	87.117	Equus_asinus_asinus
ENSLAFG00000027745	-	100	82.822	ENSECAG00000008649	CCDC12	98	82.822	Equus_caballus
ENSLAFG00000027745	-	97	65.839	ENSELUG00000024105	ccdc12	98	65.839	Esox_lucius
ENSLAFG00000027745	-	100	88.957	ENSFCAG00000015474	CCDC12	98	88.957	Felis_catus
ENSLAFG00000027745	-	97	63.226	ENSFALG00000001895	CCDC12	95	62.581	Ficedula_albicollis
ENSLAFG00000027745	-	100	88.344	ENSFDAG00000002549	CCDC12	99	88.344	Fukomys_damarensis
ENSLAFG00000027745	-	98	68.323	ENSFHEG00000016247	ccdc12	91	68.323	Fundulus_heteroclitus
ENSLAFG00000027745	-	98	58.385	ENSGMOG00000016901	ccdc12	98	58.385	Gadus_morhua
ENSLAFG00000027745	-	88	69.655	ENSGAFG00000006762	ccdc12	98	67.702	Gambusia_affinis
ENSLAFG00000027745	-	98	66.460	ENSGACG00000008629	ccdc12	98	66.460	Gasterosteus_aculeatus
ENSLAFG00000027745	-	100	72.121	ENSGAGG00000019688	CCDC12	97	72.121	Gopherus_agassizii
ENSLAFG00000027745	-	100	86.503	ENSGGOG00000009012	CCDC12	91	86.503	Gorilla_gorilla
ENSLAFG00000027745	-	98	67.702	ENSHBUG00000016447	ccdc12	98	67.702	Haplochromis_burtoni
ENSLAFG00000027745	-	100	88.344	ENSHGLG00000014058	CCDC12	98	88.344	Heterocephalus_glaber_female
ENSLAFG00000027745	-	100	88.344	ENSHGLG00100005918	CCDC12	98	88.344	Heterocephalus_glaber_male
ENSLAFG00000027745	-	98	64.815	ENSHCOG00000015164	ccdc12	98	64.815	Hippocampus_comes
ENSLAFG00000027745	-	98	62.733	ENSIPUG00000001310	Ccdc12	98	62.733	Ictalurus_punctatus
ENSLAFG00000027745	-	100	87.730	ENSSTOG00000003085	CCDC12	98	87.730	Ictidomys_tridecemlineatus
ENSLAFG00000027745	-	100	85.276	ENSJJAG00000014918	Ccdc12	98	85.802	Jaculus_jaculus
ENSLAFG00000027745	-	98	66.258	ENSKMAG00000013891	ccdc12	98	66.258	Kryptolebias_marmoratus
ENSLAFG00000027745	-	98	67.500	ENSLBEG00000024714	ccdc12	85	67.500	Labrus_bergylta
ENSLAFG00000027745	-	100	70.732	ENSLOCG00000005683	ccdc12	92	70.122	Lepisosteus_oculatus
ENSLAFG00000027745	-	100	85.890	ENSMFAG00000002976	CCDC12	91	85.890	Macaca_fascicularis
ENSLAFG00000027745	-	100	85.890	ENSMMUG00000019810	CCDC12	91	85.890	Macaca_mulatta
ENSLAFG00000027745	-	100	85.890	ENSMNEG00000035785	CCDC12	91	85.890	Macaca_nemestrina
ENSLAFG00000027745	-	100	86.503	ENSMLEG00000038060	CCDC12	91	86.503	Mandrillus_leucophaeus
ENSLAFG00000027745	-	88	70.345	ENSMAMG00000012165	ccdc12	98	67.702	Mastacembelus_armatus
ENSLAFG00000027745	-	98	67.702	ENSMZEG00005014728	ccdc12	98	67.702	Maylandia_zebra
ENSLAFG00000027745	-	95	58.974	ENSMZEG00005019013	-	96	58.974	Maylandia_zebra
ENSLAFG00000027745	-	88	69.065	ENSMGAG00000002815	CCDC12	90	67.296	Meleagris_gallopavo
ENSLAFG00000027745	-	100	85.276	ENSMAUG00000008879	Ccdc12	98	85.276	Mesocricetus_auratus
ENSLAFG00000027745	-	100	86.585	ENSMICG00000032886	CCDC12	98	87.195	Microcebus_murinus
ENSLAFG00000027745	-	100	85.890	ENSMOCG00000004483	Ccdc12	98	85.890	Microtus_ochrogaster
ENSLAFG00000027745	-	66	73.077	ENSMMOG00000001860	ccdc12	72	73.077	Mola_mola
ENSLAFG00000027745	-	99	74.233	ENSMODG00000013967	-	97	74.847	Monodelphis_domestica
ENSLAFG00000027745	-	97	64.375	ENSMODG00000022615	-	96	64.375	Monodelphis_domestica
ENSLAFG00000027745	-	97	63.750	ENSMODG00000025021	-	96	63.750	Monodelphis_domestica
ENSLAFG00000027745	-	98	67.081	ENSMALG00000011850	ccdc12	98	67.081	Monopterus_albus
ENSLAFG00000027745	-	99	86.335	MGP_CAROLIEiJ_G0032737	-	97	86.335	Mus_caroli
ENSLAFG00000027745	-	99	86.335	ENSMUSG00000019659	Ccdc12	97	86.335	Mus_musculus
ENSLAFG00000027745	-	99	86.335	MGP_PahariEiJ_G0015604	Ccdc12	97	86.335	Mus_pahari
ENSLAFG00000027745	-	100	85.890	MGP_SPRETEiJ_G0033885	Ccdc12	98	85.890	Mus_spretus
ENSLAFG00000027745	-	100	83.436	ENSMLUG00000009547	CCDC12	98	83.436	Myotis_lucifugus
ENSLAFG00000027745	-	100	85.276	ENSNGAG00000004149	Ccdc12	98	85.802	Nannospalax_galili
ENSLAFG00000027745	-	97	62.821	ENSNBRG00000015275	ccdc12	97	62.821	Neolamprologus_brichardi
ENSLAFG00000027745	-	100	85.276	ENSNLEG00000006219	CCDC12	98	85.276	Nomascus_leucogenys
ENSLAFG00000027745	-	99	79.503	ENSOPRG00000005086	CCDC12	98	78.882	Ochotona_princeps
ENSLAFG00000027745	-	100	88.957	ENSODEG00000012202	CCDC12	98	88.957	Octodon_degus
ENSLAFG00000027745	-	98	67.702	ENSONIG00000003061	ccdc12	98	67.702	Oreochromis_niloticus
ENSLAFG00000027745	-	85	73.881	ENSOANG00000004263	-	100	73.881	Ornithorhynchus_anatinus
ENSLAFG00000027745	-	99	88.272	ENSOCUG00000012431	CCDC12	83	88.272	Oryctolagus_cuniculus
ENSLAFG00000027745	-	93	67.742	ENSORLG00000008126	ccdc12	94	67.742	Oryzias_latipes
ENSLAFG00000027745	-	98	67.702	ENSORLG00020013927	ccdc12	98	67.702	Oryzias_latipes_hni
ENSLAFG00000027745	-	98	67.702	ENSORLG00015020115	ccdc12	98	67.702	Oryzias_latipes_hsok
ENSLAFG00000027745	-	97	68.125	ENSOMEG00000022304	ccdc12	98	68.125	Oryzias_melastigma
ENSLAFG00000027745	-	97	68.125	ENSOMEG00000014082	ccdc12	98	68.125	Oryzias_melastigma
ENSLAFG00000027745	-	71	89.286	ENSOGAG00000016807	CCDC12	100	89.286	Otolemur_garnettii
ENSLAFG00000027745	-	85	86.765	ENSOARG00000006426	CCDC12	99	88.971	Ovis_aries
ENSLAFG00000027745	-	100	85.890	ENSPPAG00000028782	CCDC12	91	85.890	Pan_paniscus
ENSLAFG00000027745	-	100	88.957	ENSPPRG00000013547	CCDC12	98	88.957	Panthera_pardus
ENSLAFG00000027745	-	100	88.957	ENSPTIG00000014875	CCDC12	94	88.957	Panthera_tigris_altaica
ENSLAFG00000027745	-	100	86.503	ENSPTRG00000014862	CCDC12	91	86.503	Pan_troglodytes
ENSLAFG00000027745	-	100	86.503	ENSPANG00000017485	CCDC12	93	86.503	Papio_anubis
ENSLAFG00000027745	-	97	67.702	ENSPKIG00000019130	ccdc12	98	68.944	Paramormyrops_kingsleyae
ENSLAFG00000027745	-	71	80.357	ENSPSIG00000010867	CCDC12	100	80.357	Pelodiscus_sinensis
ENSLAFG00000027745	-	98	66.460	ENSPMGG00000012211	ccdc12	98	66.460	Periophthalmus_magnuspinnatus
ENSLAFG00000027745	-	98	71.338	ENSPEMG00000001376	-	96	71.338	Peromyscus_maniculatus_bairdii
ENSLAFG00000027745	-	100	85.890	ENSPEMG00000022196	-	98	85.890	Peromyscus_maniculatus_bairdii
ENSLAFG00000027745	-	96	64.331	ENSPMAG00000000005	ccdc12	97	62.651	Petromyzon_marinus
ENSLAFG00000027745	-	98	77.500	ENSPCIG00000025941	CCDC12	96	77.500	Phascolarctos_cinereus
ENSLAFG00000027745	-	85	70.714	ENSPFOG00000000343	ccdc12	98	68.323	Poecilia_formosa
ENSLAFG00000027745	-	98	67.702	ENSPLAG00000019010	ccdc12	98	67.702	Poecilia_latipinna
ENSLAFG00000027745	-	85	70.714	ENSPMEG00000022371	ccdc12	79	68.323	Poecilia_mexicana
ENSLAFG00000027745	-	98	67.702	ENSPREG00000020932	ccdc12	79	67.702	Poecilia_reticulata
ENSLAFG00000027745	-	100	86.503	ENSPPYG00000013924	CCDC12	81	86.503	Pongo_abelii
ENSLAFG00000027745	-	100	88.344	ENSPCAG00000005800	CCDC12	98	88.957	Procavia_capensis
ENSLAFG00000027745	-	100	85.976	ENSPCOG00000018682	CCDC12	91	86.585	Propithecus_coquereli
ENSLAFG00000027745	-	100	85.890	ENSPVAG00000004204	CCDC12	98	85.890	Pteropus_vampyrus
ENSLAFG00000027745	-	98	67.702	ENSPNYG00000016295	ccdc12	98	67.702	Pundamilia_nyererei
ENSLAFG00000027745	-	98	54.321	ENSPNAG00000028558	ccdc12	90	75.000	Pygocentrus_nattereri
ENSLAFG00000027745	-	99	86.335	ENSRNOG00000020946	Ccdc12	97	86.335	Rattus_norvegicus
ENSLAFG00000027745	-	100	86.503	ENSRBIG00000039910	CCDC12	91	86.503	Rhinopithecus_bieti
ENSLAFG00000027745	-	100	86.503	ENSRROG00000039721	CCDC12	98	86.503	Rhinopithecus_roxellana
ENSLAFG00000027745	-	100	87.730	ENSSBOG00000035443	CCDC12	91	87.730	Saimiri_boliviensis_boliviensis
ENSLAFG00000027745	-	98	76.875	ENSSHAG00000003265	-	96	76.250	Sarcophilus_harrisii
ENSLAFG00000027745	-	99	67.485	ENSSFOG00015001307	ccdc12	99	67.485	Scleropages_formosus
ENSLAFG00000027745	-	98	67.702	ENSSMAG00000019856	ccdc12	98	67.702	Scophthalmus_maximus
ENSLAFG00000027745	-	96	67.516	ENSSDUG00000006549	ccdc12	96	67.516	Seriola_dumerili
ENSLAFG00000027745	-	98	67.702	ENSSLDG00000015956	ccdc12	98	67.702	Seriola_lalandi_dorsalis
ENSLAFG00000027745	-	69	69.298	ENSSPUG00000013054	CCDC12	62	69.912	Sphenodon_punctatus
ENSLAFG00000027745	-	98	67.702	ENSSPAG00000007010	ccdc12	98	67.702	Stegastes_partitus
ENSLAFG00000027745	-	100	88.344	ENSSSCG00000011329	-	98	88.344	Sus_scrofa
ENSLAFG00000027745	-	92	52.414	ENSSSCG00000007882	-	95	51.701	Sus_scrofa
ENSLAFG00000027745	-	64	68.224	ENSTGUG00000000186	CCDC12	86	67.290	Taeniopygia_guttata
ENSLAFG00000027745	-	97	63.226	ENSTRUG00000014023	ccdc12	83	62.745	Takifugu_rubripes
ENSLAFG00000027745	-	97	67.925	ENSTNIG00000018407	ccdc12	96	67.925	Tetraodon_nigroviridis
ENSLAFG00000027745	-	99	62.577	ENSTBEG00000000048	CCDC12	98	62.577	Tupaia_belangeri
ENSLAFG00000027745	-	100	78.788	ENSTTRG00000015854	CCDC12	98	78.788	Tursiops_truncatus
ENSLAFG00000027745	-	100	85.276	ENSUAMG00000025548	CCDC12	95	89.051	Ursus_americanus
ENSLAFG00000027745	-	100	89.571	ENSUMAG00000004346	CCDC12	98	89.571	Ursus_maritimus
ENSLAFG00000027745	-	66	67.890	ENSVPAG00000000070	-	96	67.890	Vicugna_pacos
ENSLAFG00000027745	-	100	89.571	ENSVVUG00000004582	CCDC12	98	89.571	Vulpes_vulpes
ENSLAFG00000027745	-	87	74.265	ENSXETG00000013123	ccdc12	100	73.529	Xenopus_tropicalis
ENSLAFG00000027745	-	98	67.702	ENSXCOG00000019741	ccdc12	98	67.702	Xiphophorus_couchianus
ENSLAFG00000027745	-	98	67.702	ENSXMAG00000014098	ccdc12	79	67.702	Xiphophorus_maculatus