EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000027848 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 4181 bases
Position: chrscaffold_21:2772453-2776633
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	1	6
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	2	6
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	3	6
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	4	6
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	5	6
ENSLAFP00000019611	zf-C2H2	PF00096.26	7.2e-38	6	6
ENSLAFP00000019611	zf-met	PF12874.7	9.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031737	ZNF408-201	1872	-	ENSLAFP00000019611	623 (aa)	-	G3TVK3

Gene Model

Click here to download ENSLAFG00000027848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000027848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000027848	ZNF408	51	34.848	ENSLAFG00000002266	ZNF319	84	34.826
ENSLAFG00000027848	ZNF408	68	39.306	ENSLAFG00000031653	-	99	43.060
ENSLAFG00000027848	ZNF408	51	35.656	ENSLAFG00000006532	PRDM5	98	34.767
ENSLAFG00000027848	ZNF408	51	39.487	ENSLAFG00000022529	ZNF628	100	38.806
ENSLAFG00000027848	ZNF408	51	37.383	ENSLAFG00000030700	ZNF865	100	43.478
ENSLAFG00000027848	ZNF408	50	30.435	ENSLAFG00000022960	ZFP64	72	31.655
ENSLAFG00000027848	ZNF408	52	38.272	ENSLAFG00000002806	ZNF317	71	36.691
ENSLAFG00000027848	ZNF408	55	37.549	ENSLAFG00000002909	-	79	37.954
ENSLAFG00000027848	ZNF408	51	32.927	ENSLAFG00000013445	ZNF521	98	31.481
ENSLAFG00000027848	ZNF408	53	37.714	ENSLAFG00000032716	-	100	37.681
ENSLAFG00000027848	ZNF408	52	35.714	ENSLAFG00000003125	ZFP1	67	41.053
ENSLAFG00000027848	ZNF408	55	41.333	ENSLAFG00000006959	ZNF2	58	36.823

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000027848	ZNF408	100	79.615	ENSG00000175213	ZNF408	86	79.615	Homo_sapiens
ENSLAFG00000027848	ZNF408	100	79.615	ENSAMEG00000006904	ZNF408	86	79.615	Ailuropoda_melanoleuca
ENSLAFG00000027848	ZNF408	99	80.227	ENSANAG00000036294	ZNF408	93	80.227	Aotus_nancymaae
ENSLAFG00000027848	ZNF408	57	53.927	ENSAMXG00000032642	znf408	54	53.141	Astyanax_mexicanus
ENSLAFG00000027848	ZNF408	99	80.097	ENSCJAG00000019859	ZNF408	86	79.454	Callithrix_jacchus
ENSLAFG00000027848	ZNF408	100	80.861	ENSCAFG00000009143	ZNF408	83	81.021	Canis_familiaris
ENSLAFG00000027848	ZNF408	100	80.702	ENSCAFG00020019155	ZNF408	83	80.861	Canis_lupus_dingo
ENSLAFG00000027848	ZNF408	96	75.336	ENSCHIG00000025346	ZNF408	97	75.503	Capra_hircus
ENSLAFG00000027848	ZNF408	99	75.890	ENSTSYG00000025443	ZNF408	85	76.214	Carlito_syrichta
ENSLAFG00000027848	ZNF408	99	79.355	ENSCCAG00000029472	ZNF408	85	79.355	Cebus_capucinus
ENSLAFG00000027848	ZNF408	64	96.220	ENSCHOG00000009909	ZNF408	75	96.220	Choloepus_hoffmanni
ENSLAFG00000027848	ZNF408	99	69.887	ENSCGRG00001023588	Zfp408	86	69.280	Cricetulus_griseus_chok1gshd
ENSLAFG00000027848	ZNF408	99	69.887	ENSCGRG00000017618	Zfp408	86	69.280	Cricetulus_griseus_crigri
ENSLAFG00000027848	ZNF408	99	77.581	ENSDNOG00000047669	ZNF408	85	77.581	Dasypus_novemcinctus
ENSLAFG00000027848	ZNF408	98	68.740	ENSDORG00000000387	Zfp408	84	68.464	Dipodomys_ordii
ENSLAFG00000027848	ZNF408	85	68.996	ENSETEG00000017621	-	83	68.559	Echinops_telfairi
ENSLAFG00000027848	ZNF408	100	80.417	ENSEASG00005015461	ZNF408	86	80.417	Equus_asinus_asinus
ENSLAFG00000027848	ZNF408	100	80.738	ENSECAG00000010878	ZNF408	90	76.823	Equus_caballus
ENSLAFG00000027848	ZNF408	96	70.184	ENSEEUG00000010466	ZNF408	81	69.900	Erinaceus_europaeus
ENSLAFG00000027848	ZNF408	100	81.220	ENSFCAG00000029105	ZNF408	86	81.220	Felis_catus
ENSLAFG00000027848	ZNF408	100	78.973	ENSGGOG00000010152	ZNF408	86	78.973	Gorilla_gorilla
ENSLAFG00000027848	ZNF408	100	81.380	ENSMICG00000045320	ZNF408	86	81.380	Microcebus_murinus
ENSLAFG00000027848	ZNF408	85	56.266	ENSMODG00000019895	-	88	56.010	Monodelphis_domestica
ENSLAFG00000027848	ZNF408	99	80.614	ENSMPUG00000005490	ZNF408	86	80.257	Mustela_putorius_furo
ENSLAFG00000027848	ZNF408	99	70.323	ENSNGAG00000000309	Zfp408	85	70.048	Nannospalax_galili
ENSLAFG00000027848	ZNF408	100	79.615	ENSNLEG00000014132	ZNF408	86	79.615	Nomascus_leucogenys
ENSLAFG00000027848	ZNF408	99	63.328	ENSOPRG00000009225	ZNF408	86	62.359	Ochotona_princeps
ENSLAFG00000027848	ZNF408	99	76.214	ENSOCUG00000010953	ZNF408	86	76.214	Oryctolagus_cuniculus
ENSLAFG00000027848	ZNF408	100	79.775	ENSOGAG00000034080	ZNF408	100	79.775	Otolemur_garnettii
ENSLAFG00000027848	ZNF408	100	79.775	ENSPPAG00000034993	ZNF408	86	79.775	Pan_paniscus
ENSLAFG00000027848	ZNF408	100	81.701	ENSPPRG00000016866	ZNF408	86	81.701	Panthera_pardus
ENSLAFG00000027848	ZNF408	100	82.183	ENSPTIG00000015467	ZNF408	86	82.183	Panthera_tigris_altaica
ENSLAFG00000027848	ZNF408	100	79.775	ENSPTRG00000003551	ZNF408	86	79.775	Pan_troglodytes
ENSLAFG00000027848	ZNF408	89	70.018	ENSPEMG00000016757	Zfp408	99	69.340	Peromyscus_maniculatus_bairdii
ENSLAFG00000027848	ZNF408	62	47.859	ENSPFOG00000001760	-	90	48.541	Poecilia_formosa
ENSLAFG00000027848	ZNF408	62	48.601	ENSPMEG00000021147	-	70	48.780	Poecilia_mexicana
ENSLAFG00000027848	ZNF408	100	78.973	ENSPPYG00000003318	ZNF408	100	79.407	Pongo_abelii
ENSLAFG00000027848	ZNF408	99	84.405	ENSPCAG00000014001	ZNF408	86	84.887	Procavia_capensis
ENSLAFG00000027848	ZNF408	100	81.731	ENSPCOG00000028698	ZNF408	86	81.731	Propithecus_coquereli
ENSLAFG00000027848	ZNF408	100	80.096	ENSPVAG00000015791	ZNF408	86	79.133	Pteropus_vampyrus
ENSLAFG00000027848	ZNF408	99	77.742	ENSSBOG00000033023	ZNF408	85	78.065	Saimiri_boliviensis_boliviensis
ENSLAFG00000027848	ZNF408	100	79.775	ENSSSCG00000023097	ZNF408	83	79.775	Sus_scrofa
ENSLAFG00000027848	ZNF408	72	87.645	ENSTBEG00000004260	ZNF408	66	87.645	Tupaia_belangeri
ENSLAFG00000027848	ZNF408	100	79.936	ENSUAMG00000026154	ZNF408	86	79.936	Ursus_americanus
ENSLAFG00000027848	ZNF408	100	79.775	ENSUMAG00000014405	ZNF408	86	79.775	Ursus_maritimus
ENSLAFG00000027848	ZNF408	100	80.861	ENSVVUG00000026805	ZNF408	83	80.702	Vulpes_vulpes
ENSLAFG00000027848	ZNF408	60	55.145	ENSXETG00000001980	znf408	100	53.826	Xenopus_tropicalis
ENSLAFG00000027848	ZNF408	65	47.805	ENSXCOG00000002869	-	73	48.663	Xiphophorus_couchianus
ENSLAFG00000027848	ZNF408	65	46.829	ENSXMAG00000018347	-	70	49.057	Xiphophorus_maculatus