EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000028004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 8018 bases
Position: chrscaffold_68:11071139-11079156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000023259	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000032752	-	1116	-	ENSLAFP00000023259	371 (aa)	-	G3U601

Gene Model

Click here to download ENSLAFG00000028004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000028004	-	78	43.345	ENSLAFG00000030360	SEPT12	81	43.345
ENSLAFG00000028004	-	99	74.670	ENSLAFG00000003381	SEPT4	77	74.054
ENSLAFG00000028004	-	92	39.714	ENSLAFG00000016488	SEPT11	75	40.896
ENSLAFG00000028004	-	85	56.782	ENSLAFG00000011254	SEPT7	66	60.410
ENSLAFG00000028004	-	84	45.860	ENSLAFG00000007655	SEPT9	54	45.860
ENSLAFG00000028004	-	91	60.059	ENSLAFG00000011964	-	89	60.417
ENSLAFG00000028004	-	89	42.730	ENSLAFG00000008567	SEPT8	74	42.857
ENSLAFG00000028004	-	92	64.571	ENSLAFG00000027789	SEPT1	94	63.953
ENSLAFG00000028004	-	91	59.172	ENSLAFG00000030960	-	89	59.524
ENSLAFG00000028004	-	85	47.826	ENSLAFG00000015724	SEPT3	80	51.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028004	-	100	98.113	ENSG00000184702	SEPT5	100	99.003	Homo_sapiens
ENSLAFG00000028004	-	96	83.146	ENSAPOG00000004707	sept5b	94	82.203	Acanthochromis_polyacanthus
ENSLAFG00000028004	-	100	85.175	ENSAPOG00000021568	sept5a	97	86.150	Acanthochromis_polyacanthus
ENSLAFG00000028004	-	95	97.443	ENSAMEG00000011509	-	84	97.443	Ailuropoda_melanoleuca
ENSLAFG00000028004	-	94	89.429	ENSACIG00000006554	sept5a	95	90.294	Amphilophus_citrinellus
ENSLAFG00000028004	-	85	83.492	ENSACIG00000000964	-	95	79.351	Amphilophus_citrinellus
ENSLAFG00000028004	-	90	85.928	ENSAOCG00000019424	sept5b	90	85.841	Amphiprion_ocellaris
ENSLAFG00000028004	-	100	85.175	ENSAOCG00000015062	sept5a	97	86.150	Amphiprion_ocellaris
ENSLAFG00000028004	-	100	85.175	ENSAPEG00000017611	sept5a	97	86.150	Amphiprion_percula
ENSLAFG00000028004	-	100	78.706	ENSAPEG00000008250	sept5b	94	81.921	Amphiprion_percula
ENSLAFG00000028004	-	90	85.329	ENSATEG00000006356	sept5b	97	81.440	Anabas_testudineus
ENSLAFG00000028004	-	100	85.445	ENSATEG00000020583	sept5a	97	86.427	Anabas_testudineus
ENSLAFG00000028004	-	91	94.940	ENSAPLG00000016224	-	97	95.015	Anas_platyrhynchos
ENSLAFG00000028004	-	96	92.697	ENSACAG00000000290	-	79	92.798	Anolis_carolinensis
ENSLAFG00000028004	-	97	96.936	ENSANAG00000025950	-	95	96.936	Aotus_nancymaae
ENSLAFG00000028004	-	96	80.618	ENSACLG00000008299	sept5b	97	80.609	Astatotilapia_calliptera
ENSLAFG00000028004	-	100	85.445	ENSACLG00000011272	sept5a	94	90.265	Astatotilapia_calliptera
ENSLAFG00000028004	-	100	85.445	ENSAMXG00000006159	sept5a	96	86.427	Astyanax_mexicanus
ENSLAFG00000028004	-	100	96.765	ENSBTAG00000008320	SEPT5	100	96.765	Bos_taurus
ENSLAFG00000028004	-	100	98.113	ENSCJAG00000031147	-	100	98.113	Callithrix_jacchus
ENSLAFG00000028004	-	97	97.214	ENSCAFG00000014533	SEPT5	95	97.214	Canis_familiaris
ENSLAFG00000028004	-	100	98.383	ENSCAFG00020007897	-	100	98.383	Canis_lupus_dingo
ENSLAFG00000028004	-	95	91.854	ENSCHIG00000000129	-	90	91.854	Capra_hircus
ENSLAFG00000028004	-	97	96.936	ENSTSYG00000037551	-	95	96.936	Carlito_syrichta
ENSLAFG00000028004	-	83	98.371	ENSCAPG00000006545	-	100	98.371	Cavia_aperea
ENSLAFG00000028004	-	100	97.844	ENSCPOG00000010483	-	100	97.844	Cavia_porcellus
ENSLAFG00000028004	-	100	98.113	ENSCCAG00000036918	-	100	98.113	Cebus_capucinus
ENSLAFG00000028004	-	100	98.113	ENSCATG00000040593	-	100	98.113	Cercocebus_atys
ENSLAFG00000028004	-	100	97.305	ENSCLAG00000015333	-	100	97.305	Chinchilla_lanigera
ENSLAFG00000028004	-	100	98.113	ENSCSAG00000011732	-	100	98.113	Chlorocebus_sabaeus
ENSLAFG00000028004	-	96	94.382	ENSCPBG00000010660	-	97	94.460	Chrysemys_picta_bellii
ENSLAFG00000028004	-	97	96.379	ENSCANG00000030373	-	96	97.151	Colobus_angolensis_palliatus
ENSLAFG00000028004	-	100	98.113	ENSCGRG00001018409	-	100	98.113	Cricetulus_griseus_chok1gshd
ENSLAFG00000028004	-	95	95.442	ENSCGRG00000011656	-	93	95.442	Cricetulus_griseus_crigri
ENSLAFG00000028004	-	80	87.162	ENSCSEG00000009877	-	91	87.162	Cynoglossus_semilaevis
ENSLAFG00000028004	-	94	85.387	ENSCSEG00000019641	sept5a	96	86.136	Cynoglossus_semilaevis
ENSLAFG00000028004	-	100	84.906	ENSCVAG00000017986	sept5a	97	86.150	Cyprinodon_variegatus
ENSLAFG00000028004	-	100	84.367	ENSDARG00000013843	sept5a	87	85.319	Danio_rerio
ENSLAFG00000028004	-	100	84.636	ENSDARG00000036031	sept5b	100	83.516	Danio_rerio
ENSLAFG00000028004	-	100	98.383	ENSDORG00000013930	-	100	98.383	Dipodomys_ordii
ENSLAFG00000028004	-	87	97.826	ENSEASG00005010502	-	96	97.826	Equus_asinus_asinus
ENSLAFG00000028004	-	100	97.574	ENSECAG00000020718	-	70	97.574	Equus_caballus
ENSLAFG00000028004	-	96	81.742	ENSELUG00000005164	sept5b	96	81.994	Esox_lucius
ENSLAFG00000028004	-	95	87.006	ENSELUG00000009028	sept5a	93	86.364	Esox_lucius
ENSLAFG00000028004	-	100	96.765	ENSFCAG00000035936	-	100	96.765	Felis_catus
ENSLAFG00000028004	-	96	93.258	ENSFALG00000008028	-	97	93.352	Ficedula_albicollis
ENSLAFG00000028004	-	96	98.034	ENSFDAG00000014909	-	100	98.034	Fukomys_damarensis
ENSLAFG00000028004	-	90	74.030	ENSFHEG00000003693	sept5b	98	74.000	Fundulus_heteroclitus
ENSLAFG00000028004	-	96	87.606	ENSFHEG00000018533	sept5a	95	89.706	Fundulus_heteroclitus
ENSLAFG00000028004	-	96	92.437	ENSGALG00000001688	SEPT5	97	92.521	Gallus_gallus
ENSLAFG00000028004	-	100	85.714	ENSGAFG00000000767	sept5a	95	90.560	Gambusia_affinis
ENSLAFG00000028004	-	95	78.814	ENSGAFG00000007663	sept5b	90	78.814	Gambusia_affinis
ENSLAFG00000028004	-	93	89.049	ENSGACG00000005538	sept5a	100	86.014	Gasterosteus_aculeatus
ENSLAFG00000028004	-	96	94.382	ENSGAGG00000014385	-	90	95.058	Gopherus_agassizii
ENSLAFG00000028004	-	99	95.652	ENSGGOG00000016545	-	99	95.652	Gorilla_gorilla
ENSLAFG00000028004	-	96	80.899	ENSHBUG00000007908	sept5b	97	80.886	Haplochromis_burtoni
ENSLAFG00000028004	-	100	97.844	ENSHGLG00000013741	-	100	97.844	Heterocephalus_glaber_female
ENSLAFG00000028004	-	100	85.175	ENSHCOG00000005881	sept5a	97	85.873	Hippocampus_comes
ENSLAFG00000028004	-	93	78.902	ENSIPUG00000025006	sept5a	92	60.417	Ictalurus_punctatus
ENSLAFG00000028004	-	100	98.652	ENSSTOG00000010725	-	100	98.652	Ictidomys_tridecemlineatus
ENSLAFG00000028004	-	100	98.113	ENSJJAG00000000091	-	100	98.113	Jaculus_jaculus
ENSLAFG00000028004	-	100	85.714	ENSKMAG00000003408	sept5a	97	86.427	Kryptolebias_marmoratus
ENSLAFG00000028004	-	89	84.592	ENSLBEG00000028216	-	90	84.524	Labrus_bergylta
ENSLAFG00000028004	-	100	85.175	ENSLBEG00000025389	sept5a	97	85.873	Labrus_bergylta
ENSLAFG00000028004	-	91	91.150	ENSLACG00000015559	sept5b	86	91.150	Latimeria_chalumnae
ENSLAFG00000028004	-	100	98.113	ENSMFAG00000038117	-	100	98.113	Macaca_fascicularis
ENSLAFG00000028004	-	100	98.113	ENSMMUG00000017134	-	100	98.113	Macaca_mulatta
ENSLAFG00000028004	-	100	98.113	ENSMNEG00000036305	-	100	98.113	Macaca_nemestrina
ENSLAFG00000028004	-	95	98.860	ENSMLEG00000029088	-	100	98.860	Mandrillus_leucophaeus
ENSLAFG00000028004	-	95	81.638	ENSMAMG00000006704	sept5b	99	81.638	Mastacembelus_armatus
ENSLAFG00000028004	-	100	85.445	ENSMAMG00000014426	sept5a	97	86.427	Mastacembelus_armatus
ENSLAFG00000028004	-	100	85.445	ENSMZEG00005009762	sept5a	97	86.150	Maylandia_zebra
ENSLAFG00000028004	-	96	80.337	ENSMZEG00005011980	sept5b	97	80.332	Maylandia_zebra
ENSLAFG00000028004	-	91	92.353	ENSMGAG00000001319	-	93	92.464	Meleagris_gallopavo
ENSLAFG00000028004	-	100	98.113	ENSMAUG00000014786	-	100	98.113	Mesocricetus_auratus
ENSLAFG00000028004	-	97	96.936	ENSMICG00000028407	-	95	96.936	Microcebus_murinus
ENSLAFG00000028004	-	100	98.113	ENSMOCG00000000071	-	100	98.113	Microtus_ochrogaster
ENSLAFG00000028004	-	96	78.090	ENSMMOG00000010567	sept5b	97	78.116	Mola_mola
ENSLAFG00000028004	-	99	85.908	ENSMMOG00000011704	sept5a	96	90.560	Mola_mola
ENSLAFG00000028004	-	96	80.618	ENSMALG00000005830	sept5b	94	83.481	Monopterus_albus
ENSLAFG00000028004	-	96	87.606	ENSMALG00000020359	sept5a	91	93.836	Monopterus_albus
ENSLAFG00000028004	-	100	98.113	MGP_CAROLIEiJ_G0020551	-	100	98.113	Mus_caroli
ENSLAFG00000028004	-	92	96.774	ENSMUSG00000116594	AC133488.1	93	96.774	Mus_musculus
ENSLAFG00000028004	-	100	98.113	ENSMUSG00000072214	Sept5	100	99.206	Mus_musculus
ENSLAFG00000028004	-	100	98.113	MGP_PahariEiJ_G0016256	-	100	98.113	Mus_pahari
ENSLAFG00000028004	-	100	98.113	MGP_SPRETEiJ_G0021446	-	100	98.113	Mus_spretus
ENSLAFG00000028004	-	87	99.068	ENSMPUG00000003893	-	100	99.068	Mustela_putorius_furo
ENSLAFG00000028004	-	97	96.936	ENSMLUG00000002506	-	91	96.936	Myotis_lucifugus
ENSLAFG00000028004	-	100	98.383	ENSNGAG00000013782	-	100	98.383	Nannospalax_galili
ENSLAFG00000028004	-	99	85.637	ENSNBRG00000018717	sept5a	94	90.265	Neolamprologus_brichardi
ENSLAFG00000028004	-	96	80.337	ENSNBRG00000004761	sept5b	97	80.332	Neolamprologus_brichardi
ENSLAFG00000028004	-	82	95.738	ENSNLEG00000005511	-	94	95.738	Nomascus_leucogenys
ENSLAFG00000028004	-	92	95.308	ENSMEUG00000015556	-	97	95.308	Notamacropus_eugenii
ENSLAFG00000028004	-	92	95.601	ENSOPRG00000007708	-	97	95.601	Ochotona_princeps
ENSLAFG00000028004	-	100	97.844	ENSODEG00000016498	-	100	97.844	Octodon_degus
ENSLAFG00000028004	-	96	81.180	ENSONIG00000011388	sept5b	97	81.163	Oreochromis_niloticus
ENSLAFG00000028004	-	96	79.775	ENSORLG00000001081	sept5b	97	79.778	Oryzias_latipes
ENSLAFG00000028004	-	100	85.445	ENSORLG00000024104	sept5a	95	90.560	Oryzias_latipes
ENSLAFG00000028004	-	90	83.234	ENSORLG00020016872	sept5b	92	83.186	Oryzias_latipes_hni
ENSLAFG00000028004	-	100	85.445	ENSORLG00020005445	sept5a	95	90.560	Oryzias_latipes_hni
ENSLAFG00000028004	-	100	85.445	ENSORLG00015015192	sept5a	97	86.427	Oryzias_latipes_hsok
ENSLAFG00000028004	-	96	79.775	ENSORLG00015003711	sept5b	97	79.778	Oryzias_latipes_hsok
ENSLAFG00000028004	-	73	82.593	ENSOMEG00000022819	sept5b	89	82.593	Oryzias_melastigma
ENSLAFG00000028004	-	100	85.445	ENSOMEG00000017874	sept5a	96	90.560	Oryzias_melastigma
ENSLAFG00000028004	-	99	94.851	ENSOGAG00000026834	-	97	94.986	Otolemur_garnettii
ENSLAFG00000028004	-	100	98.113	ENSPPAG00000042516	-	100	98.113	Pan_paniscus
ENSLAFG00000028004	-	100	98.652	ENSPPRG00000002930	-	100	98.652	Panthera_pardus
ENSLAFG00000028004	-	97	97.493	ENSPTIG00000019967	-	95	97.493	Panthera_tigris_altaica
ENSLAFG00000028004	-	100	98.113	ENSPTRG00000014066	-	100	98.113	Pan_troglodytes
ENSLAFG00000028004	-	100	98.113	ENSPANG00000001023	-	100	98.113	Papio_anubis
ENSLAFG00000028004	-	100	87.871	ENSPKIG00000024641	sept5b	97	88.366	Paramormyrops_kingsleyae
ENSLAFG00000028004	-	83	95.765	ENSPSIG00000002889	-	97	95.833	Pelodiscus_sinensis
ENSLAFG00000028004	-	94	89.943	ENSPMGG00000018375	sept5a	92	90.828	Periophthalmus_magnuspinnatus
ENSLAFG00000028004	-	95	81.638	ENSPMGG00000021306	sept5b	96	81.616	Periophthalmus_magnuspinnatus
ENSLAFG00000028004	-	96	98.315	ENSPEMG00000013636	-	100	98.315	Peromyscus_maniculatus_bairdii
ENSLAFG00000028004	-	96	79.775	ENSPFOG00000016894	sept5b	97	79.778	Poecilia_formosa
ENSLAFG00000028004	-	100	85.984	ENSPFOG00000011811	sept5a	97	86.704	Poecilia_formosa
ENSLAFG00000028004	-	96	79.437	ENSPLAG00000005877	sept5b	96	79.444	Poecilia_latipinna
ENSLAFG00000028004	-	96	88.732	ENSPLAG00000018547	sept5a	95	90.855	Poecilia_latipinna
ENSLAFG00000028004	-	62	81.466	ENSPMEG00000017826	sept5b	96	78.138	Poecilia_mexicana
ENSLAFG00000028004	-	100	85.714	ENSPMEG00000004070	sept5a	97	86.427	Poecilia_mexicana
ENSLAFG00000028004	-	90	82.738	ENSPREG00000013868	sept5b	90	82.698	Poecilia_reticulata
ENSLAFG00000028004	-	96	88.451	ENSPREG00000011585	sept5a	92	89.275	Poecilia_reticulata
ENSLAFG00000028004	-	60	98.190	ENSPPYG00000011583	-	86	98.190	Pongo_abelii
ENSLAFG00000028004	-	100	98.652	ENSPCOG00000012479	-	100	98.652	Propithecus_coquereli
ENSLAFG00000028004	-	95	99.148	ENSPVAG00000012974	-	87	99.148	Pteropus_vampyrus
ENSLAFG00000028004	-	96	80.337	ENSPNYG00000010341	sept5b	96	84.024	Pundamilia_nyererei
ENSLAFG00000028004	-	96	88.169	ENSPNYG00000008373	sept5a	95	90.265	Pundamilia_nyererei
ENSLAFG00000028004	-	100	85.714	ENSPNAG00000001270	sept5b	97	86.150	Pygocentrus_nattereri
ENSLAFG00000028004	-	100	85.714	ENSPNAG00000007785	sept5a	97	86.704	Pygocentrus_nattereri
ENSLAFG00000028004	-	100	97.574	ENSRNOG00000029912	Sept5	100	97.574	Rattus_norvegicus
ENSLAFG00000028004	-	100	98.113	ENSRBIG00000041362	-	95	96.936	Rhinopithecus_bieti
ENSLAFG00000028004	-	100	94.488	ENSRROG00000041246	-	100	94.488	Rhinopithecus_roxellana
ENSLAFG00000028004	-	96	98.319	ENSSBOG00000027910	-	99	98.319	Saimiri_boliviensis_boliviensis
ENSLAFG00000028004	-	91	94.362	ENSSHAG00000011753	-	92	94.481	Sarcophilus_harrisii
ENSLAFG00000028004	-	100	87.871	ENSSFOG00015014043	sept5	95	91.150	Scleropages_formosus
ENSLAFG00000028004	-	96	81.461	ENSSMAG00000009333	sept5b	97	81.440	Scophthalmus_maximus
ENSLAFG00000028004	-	96	88.169	ENSSMAG00000006148	sept5a	94	87.500	Scophthalmus_maximus
ENSLAFG00000028004	-	96	82.584	ENSSDUG00000006594	sept5b	97	82.548	Seriola_dumerili
ENSLAFG00000028004	-	96	85.352	ENSSDUG00000002398	sept5a	95	88.855	Seriola_dumerili
ENSLAFG00000028004	-	94	89.112	ENSSLDG00000003964	sept5a	93	88.739	Seriola_lalandi_dorsalis
ENSLAFG00000028004	-	92	84.503	ENSSLDG00000005541	sept5b	75	84.751	Seriola_lalandi_dorsalis
ENSLAFG00000028004	-	91	94.940	ENSSPUG00000015346	-	97	95.015	Sphenodon_punctatus
ENSLAFG00000028004	-	96	87.887	ENSSPAG00000015627	sept5a	94	87.500	Stegastes_partitus
ENSLAFG00000028004	-	90	86.826	ENSSPAG00000000073	sept5b	90	86.726	Stegastes_partitus
ENSLAFG00000028004	-	96	97.472	ENSSSCG00000010128	-	100	91.228	Sus_scrofa
ENSLAFG00000028004	-	95	91.193	ENSTGUG00000008412	-	90	91.317	Taeniopygia_guttata
ENSLAFG00000028004	-	95	87.784	ENSTRUG00000016478	sept5a	96	88.372	Takifugu_rubripes
ENSLAFG00000028004	-	94	80.571	ENSTRUG00000018608	sept5b	95	80.563	Takifugu_rubripes
ENSLAFG00000028004	-	100	80.429	ENSTNIG00000015926	sept5a	97	80.992	Tetraodon_nigroviridis
ENSLAFG00000028004	-	96	80.392	ENSTNIG00000013578	sept5b	97	80.387	Tetraodon_nigroviridis
ENSLAFG00000028004	-	97	97.214	ENSUAMG00000011220	-	95	97.214	Ursus_americanus
ENSLAFG00000028004	-	97	97.214	ENSVVUG00000025380	-	90	97.214	Vulpes_vulpes
ENSLAFG00000028004	-	97	92.798	ENSXETG00000030888	sept5	97	92.798	Xenopus_tropicalis
ENSLAFG00000028004	-	89	83.183	ENSXCOG00000016246	sept5b	95	83.136	Xiphophorus_couchianus
ENSLAFG00000028004	-	97	87.465	ENSXCOG00000002175	sept5a	96	90.265	Xiphophorus_couchianus
ENSLAFG00000028004	-	100	85.445	ENSXMAG00000014644	sept5a	95	90.265	Xiphophorus_maculatus
ENSLAFG00000028004	-	96	79.213	ENSXMAG00000016115	sept5b	95	83.136	Xiphophorus_maculatus