EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000028081 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 18647 bases
Position: chrscaffold_34:1770801-1789447
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000019806	GTP_EFTU	PF00009.27	2.6e-54	1	1
ENSLAFP00000019806	GTP_EFTU_D2	PF03144.25	3e-13	1	1
ENSLAFP00000019806	GTP_EFTU_D3	PF03143.17	5.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000037510	-	1392	-	ENSLAFP00000019806	463 (aa)	-	G3TW48

Gene Model

Click here to download ENSLAFG00000028081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000028081	-	95	38.149	ENSLAFG00000007835	HBS1L	62	38.636
ENSLAFG00000028081	-	99	74.292	ENSLAFG00000031363	-	99	74.292
ENSLAFG00000028081	-	92	85.480	ENSLAFG00000004005	EEF1A2	100	85.480
ENSLAFG00000028081	-	95	36.878	ENSLAFG00000032278	GSPT1	72	36.712
ENSLAFG00000028081	-	99	67.609	ENSLAFG00000028231	-	99	67.609
ENSLAFG00000028081	-	99	83.261	ENSLAFG00000025700	-	99	83.261
ENSLAFG00000028081	-	99	86.985	ENSLAFG00000025161	-	100	86.985
ENSLAFG00000028081	-	99	71.304	ENSLAFG00000006909	-	99	71.304
ENSLAFG00000028081	-	99	77.243	ENSLAFG00000031338	-	99	77.243
ENSLAFG00000028081	-	94	30.180	ENSLAFG00000028911	TUFM	85	30.180
ENSLAFG00000028081	-	99	83.043	ENSLAFG00000030680	-	99	83.043
ENSLAFG00000028081	-	89	71.463	ENSLAFG00000027371	-	100	71.463
ENSLAFG00000028081	-	99	82.353	ENSLAFG00000030577	-	99	82.353
ENSLAFG00000028081	-	95	36.652	ENSLAFG00000002545	GSPT2	68	36.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028081	-	66	83.388	ENSAPOG00000004757	eef1a1l1	99	96.875	Acanthochromis_polyacanthus
ENSLAFG00000028081	-	99	90.456	ENSAMEG00000009677	-	100	90.456	Ailuropoda_melanoleuca
ENSLAFG00000028081	-	99	77.874	ENSAMEG00000004317	-	100	77.874	Ailuropoda_melanoleuca
ENSLAFG00000028081	-	99	90.672	ENSCAFG00000013249	-	100	90.672	Canis_familiaris
ENSLAFG00000028081	-	99	90.672	ENSCAFG00020020007	-	100	90.672	Canis_lupus_dingo
ENSLAFG00000028081	-	99	88.503	ENSCPBG00000000646	-	100	88.503	Chrysemys_picta_bellii
ENSLAFG00000028081	-	99	89.371	ENSCPBG00000000748	-	100	89.371	Chrysemys_picta_bellii
ENSLAFG00000028081	-	99	88.261	ENSDARG00000020850	eef1a1l1	99	88.261	Danio_rerio
ENSLAFG00000028081	-	98	86.784	ENSEASG00005012365	-	96	87.441	Equus_asinus_asinus
ENSLAFG00000028081	-	85	81.726	ENSEASG00005018013	-	99	81.726	Equus_asinus_asinus
ENSLAFG00000028081	-	99	85.033	ENSECAG00000022260	-	100	85.033	Equus_caballus
ENSLAFG00000028081	-	99	86.117	ENSELUG00000023536	eef1a1l1	100	86.117	Esox_lucius
ENSLAFG00000028081	-	99	86.551	ENSFCAG00000030530	-	100	86.551	Felis_catus
ENSLAFG00000028081	-	99	89.154	ENSGAGG00000000648	-	100	89.154	Gopherus_agassizii
ENSLAFG00000028081	-	99	89.371	ENSGAGG00000000642	-	100	89.371	Gopherus_agassizii
ENSLAFG00000028081	-	89	85.230	ENSLBEG00000002790	eef1a1l1	99	85.230	Labrus_bergylta
ENSLAFG00000028081	-	74	89.595	ENSOANG00000012066	-	100	89.595	Ornithorhynchus_anatinus
ENSLAFG00000028081	-	89	86.683	ENSOMEG00000006888	-	99	86.683	Oryzias_melastigma
ENSLAFG00000028081	-	99	87.202	ENSOARG00000002943	-	100	87.202	Ovis_aries
ENSLAFG00000028081	-	97	86.607	ENSPPRG00000005678	-	96	86.607	Panthera_pardus
ENSLAFG00000028081	-	99	90.022	ENSPPRG00000008525	-	100	90.022	Panthera_pardus
ENSLAFG00000028081	-	99	91.974	ENSPTIG00000006939	-	100	91.974	Panthera_tigris_altaica
ENSLAFG00000028081	-	99	88.937	ENSPSIG00000008610	-	100	88.937	Pelodiscus_sinensis
ENSLAFG00000028081	-	65	97.222	ENSPVAG00000007682	-	65	97.222	Pteropus_vampyrus
ENSLAFG00000028081	-	100	80.130	ENSSMAG00000018455	-	100	80.130	Scophthalmus_maximus
ENSLAFG00000028081	-	99	87.852	ENSSPUG00000003655	-	100	87.852	Sphenodon_punctatus
ENSLAFG00000028081	-	99	86.551	ENSSSCG00000034113	-	100	86.551	Sus_scrofa
ENSLAFG00000028081	-	98	86.062	ENSSSCG00000038035	-	100	86.117	Sus_scrofa
ENSLAFG00000028081	-	99	75.705	ENSUAMG00000007676	-	100	75.705	Ursus_americanus
ENSLAFG00000028081	-	51	77.447	ENSUAMG00000006085	-	98	77.447	Ursus_americanus
ENSLAFG00000028081	-	99	88.720	ENSUAMG00000008928	-	100	88.720	Ursus_americanus
ENSLAFG00000028081	-	99	90.672	ENSUMAG00000013211	-	100	90.672	Ursus_maritimus
ENSLAFG00000028081	-	99	90.456	ENSVVUG00000026886	-	100	90.456	Vulpes_vulpes
ENSLAFG00000028081	-	99	86.117	ENSXETG00000022604	eef1a1o	100	86.117	Xenopus_tropicalis