EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000028327 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 3859 bases
Position: chrscaffold_33:5052928-5056786
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000026752	G-patch	PF01585.23	3.3e-09	1	1
ENSLAFP00000018409	G-patch	PF01585.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000030104	-	1215	-	ENSLAFP00000026752	405 (aa)	-	G3UFZ4
ENSLAFT00000028599	-	1233	-	ENSLAFP00000018409	411 (aa)	-	G3TS51

Gene Model

Click here to download ENSLAFG00000028327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028327	-	82	62.147	ENSG00000160818	GPATCH4	98	65.845	Homo_sapiens
ENSLAFG00000028327	-	50	36.797	ENSAPOG00000008436	gpatch4	53	38.318	Acanthochromis_polyacanthus
ENSLAFG00000028327	-	94	54.187	ENSAMEG00000014829	GPATCH4	99	55.059	Ailuropoda_melanoleuca
ENSLAFG00000028327	-	50	36.275	ENSAOCG00000015494	gpatch4	50	38.235	Amphiprion_ocellaris
ENSLAFG00000028327	-	51	33.884	ENSAPEG00000022243	gpatch4	54	37.327	Amphiprion_percula
ENSLAFG00000028327	-	100	58.129	ENSANAG00000035354	GPATCH4	94	62.216	Aotus_nancymaae
ENSLAFG00000028327	-	91	55.112	ENSBTAG00000000406	GPATCH4	87	60.000	Bos_taurus
ENSLAFG00000028327	-	82	60.784	ENSCJAG00000006048	GPATCH4	92	62.644	Callithrix_jacchus
ENSLAFG00000028327	-	99	51.620	ENSCAFG00000016788	GPATCH4	96	52.009	Canis_familiaris
ENSLAFG00000028327	-	91	56.608	ENSCHIG00000021295	GPATCH4	87	61.732	Capra_hircus
ENSLAFG00000028327	-	81	62.286	ENSCCAG00000036114	GPATCH4	92	62.571	Cebus_capucinus
ENSLAFG00000028327	-	100	60.641	ENSCATG00000042152	GPATCH4	97	62.014	Cercocebus_atys
ENSLAFG00000028327	-	100	54.253	ENSCLAG00000002967	-	97	54.023	Chinchilla_lanigera
ENSLAFG00000028327	-	100	61.379	ENSCSAG00000002161	GPATCH4	97	62.069	Chlorocebus_sabaeus
ENSLAFG00000028327	-	81	62.000	ENSCANG00000030031	GPATCH4	96	65.103	Colobus_angolensis_palliatus
ENSLAFG00000028327	-	96	48.529	ENSCGRG00001016898	Gpatch4	99	48.325	Cricetulus_griseus_chok1gshd
ENSLAFG00000028327	-	96	48.529	ENSCGRG00000008399	Gpatch4	99	48.325	Cricetulus_griseus_crigri
ENSLAFG00000028327	-	99	59.861	ENSDNOG00000034673	GPATCH4	96	59.629	Dasypus_novemcinctus
ENSLAFG00000028327	-	100	55.172	ENSETEG00000000659	-	97	54.292	Echinops_telfairi
ENSLAFG00000028327	-	95	57.002	ENSEASG00005018284	GPATCH4	95	59.286	Equus_asinus_asinus
ENSLAFG00000028327	-	95	57.002	ENSECAG00000011135	GPATCH4	98	61.224	Equus_caballus
ENSLAFG00000028327	-	99	48.810	ENSEEUG00000003221	-	75	53.939	Erinaceus_europaeus
ENSLAFG00000028327	-	70	33.233	ENSELUG00000011900	gpatch4	63	33.808	Esox_lucius
ENSLAFG00000028327	-	69	59.459	ENSFCAG00000006554	GPATCH4	90	55.891	Felis_catus
ENSLAFG00000028327	-	51	38.914	ENSFHEG00000003097	gpatch4	52	37.264	Fundulus_heteroclitus
ENSLAFG00000028327	-	81	63.218	ENSGGOG00000000753	GPATCH4	92	64.080	Gorilla_gorilla
ENSLAFG00000028327	-	99	51.395	ENSSTOG00000020510	GPATCH4	100	51.044	Ictidomys_tridecemlineatus
ENSLAFG00000028327	-	50	36.864	ENSLBEG00000016296	gpatch4	51	34.874	Labrus_bergylta
ENSLAFG00000028327	-	83	60.942	ENSMFAG00000030965	GPATCH4	93	63.533	Macaca_fascicularis
ENSLAFG00000028327	-	100	60.502	ENSMMUG00000002624	GPATCH4	96	63.510	Macaca_mulatta
ENSLAFG00000028327	-	94	58.252	ENSMNEG00000028844	GPATCH4	93	64.205	Macaca_nemestrina
ENSLAFG00000028327	-	83	61.496	ENSMLEG00000037909	GPATCH4	93	64.387	Mandrillus_leucophaeus
ENSLAFG00000028327	-	52	31.579	ENSMAMG00000010151	gpatch4	50	37.327	Mastacembelus_armatus
ENSLAFG00000028327	-	83	60.894	ENSMICG00000013624	GPATCH4	92	64.183	Microcebus_murinus
ENSLAFG00000028327	-	62	48.120	ENSMODG00000016818	-	88	47.791	Monodelphis_domestica
ENSLAFG00000028327	-	96	48.395	MGP_CAROLIEiJ_G0025152	Gpatch4	100	59.414	Mus_caroli
ENSLAFG00000028327	-	84	51.791	ENSMUSG00000028069	Gpatch4	99	59.244	Mus_musculus
ENSLAFG00000028327	-	96	48.522	MGP_PahariEiJ_G0026595	-	100	60.251	Mus_pahari
ENSLAFG00000028327	-	84	51.923	MGP_SPRETEiJ_G0026093	Gpatch4	99	59.244	Mus_spretus
ENSLAFG00000028327	-	99	51.054	ENSMPUG00000004136	-	97	50.237	Mustela_putorius_furo
ENSLAFG00000028327	-	100	54.524	ENSMLUG00000009571	GPATCH4	97	54.630	Myotis_lucifugus
ENSLAFG00000028327	-	81	62.751	ENSNLEG00000027678	GPATCH4	92	64.183	Nomascus_leucogenys
ENSLAFG00000028327	-	52	43.556	ENSMEUG00000006861	-	57	76.923	Notamacropus_eugenii
ENSLAFG00000028327	-	99	52.706	ENSOPRG00000000586	GPATCH4	94	55.048	Ochotona_princeps
ENSLAFG00000028327	-	73	54.808	ENSOCUG00000025781	-	95	52.844	Oryctolagus_cuniculus
ENSLAFG00000028327	-	50	35.931	ENSORLG00020013892	gpatch4	54	38.776	Oryzias_latipes_hni
ENSLAFG00000028327	-	99	52.656	ENSOGAG00000006698	-	96	54.953	Otolemur_garnettii
ENSLAFG00000028327	-	91	56.716	ENSOARG00000006123	GPATCH4	87	61.560	Ovis_aries
ENSLAFG00000028327	-	96	55.825	ENSPPAG00000028364	-	78	63.897	Pan_paniscus
ENSLAFG00000028327	-	69	57.912	ENSPPRG00000002106	GPATCH4	90	55.723	Panthera_pardus
ENSLAFG00000028327	-	69	60.339	ENSPTIG00000006717	GPATCH4	84	61.888	Panthera_tigris_altaica
ENSLAFG00000028327	-	96	55.825	ENSPTRG00000001464	GPATCH4	83	58.313	Pan_troglodytes
ENSLAFG00000028327	-	83	61.496	ENSPANG00000018543	GPATCH4	93	64.489	Papio_anubis
ENSLAFG00000028327	-	59	31.111	ENSPMAG00000009175	gpatch4	67	38.071	Petromyzon_marinus
ENSLAFG00000028327	-	51	35.745	ENSPFOG00000011835	gpatch4	70	35.165	Poecilia_formosa
ENSLAFG00000028327	-	51	35.745	ENSPMEG00000001375	gpatch4	70	35.294	Poecilia_mexicana
ENSLAFG00000028327	-	100	60.633	ENSPPYG00000000711	-	97	60.633	Pongo_abelii
ENSLAFG00000028327	-	64	57.721	ENSPVAG00000007505	-	69	57.721	Pteropus_vampyrus
ENSLAFG00000028327	-	96	50.488	ENSRNOG00000018969	Gpatch4	99	51.905	Rattus_norvegicus
ENSLAFG00000028327	-	69	65.878	ENSRBIG00000005742	GPATCH4	92	67.361	Rhinopithecus_bieti
ENSLAFG00000028327	-	100	60.183	ENSRROG00000044157	GPATCH4	97	64.327	Rhinopithecus_roxellana
ENSLAFG00000028327	-	100	56.885	ENSSBOG00000024840	GPATCH4	97	56.109	Saimiri_boliviensis_boliviensis
ENSLAFG00000028327	-	55	46.186	ENSSHAG00000015436	-	89	46.988	Sarcophilus_harrisii
ENSLAFG00000028327	-	92	41.371	ENSSARG00000008606	-	95	41.919	Sorex_araneus
ENSLAFG00000028327	-	50	33.193	ENSSPAG00000011683	gpatch4	54	36.986	Stegastes_partitus
ENSLAFG00000028327	-	100	56.393	ENSSSCG00000006481	GPATCH4	97	58.219	Sus_scrofa
ENSLAFG00000028327	-	100	54.846	ENSTTRG00000001113	GPATCH4	97	57.075	Tursiops_truncatus
ENSLAFG00000028327	-	99	53.828	ENSUAMG00000013407	GPATCH4	96	56.265	Ursus_americanus
ENSLAFG00000028327	-	99	53.132	ENSUMAG00000017797	GPATCH4	96	55.344	Ursus_maritimus
ENSLAFG00000028327	-	99	49.890	ENSVVUG00000006004	-	96	50.221	Vulpes_vulpes
ENSLAFG00000028327	-	53	35.537	ENSXCOG00000003911	gpatch4	68	36.576	Xiphophorus_couchianus
ENSLAFG00000028327	-	53	33.735	ENSXMAG00000024520	gpatch4	68	35.472	Xiphophorus_maculatus