EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000028434 (Gene tree)
Gene ID: -
Gene Symbol: POC1A
Alias: DKFZP434C245|WDR51A
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 64909 bases
Position: chrscaffold_12:15486434-15551342
Accession: 24488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029197	eIF2A	PF08662.11	2.7e-08	1	1
ENSLAFP00000019779	eIF2A	PF08662.11	9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033958	POC1A-202	873	-	ENSLAFP00000029197	291 (aa)	-	G3UMY8
ENSLAFT00000026312	POC1A-201	1194	-	ENSLAFP00000019779	397 (aa)	-	G3TW21

Gene Model

Click here to download ENSLAFG00000028434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000028434	POC1A	96	30.172	ENSLAFG00000012108	WDR3	50	30.172
ENSLAFG00000028434	POC1A	99	61.953	ENSLAFG00000017550	POC1B	99	46.895
ENSLAFG00000028434	POC1A	98	35.249	ENSLAFG00000016063	WDR5B	93	35.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028434	POC1A	99	88.000	ENSG00000164087	POC1A	99	84.615	Homo_sapiens
ENSLAFG00000028434	POC1A	99	74.582	ENSAPOG00000002677	POC1A	99	73.285	Acanthochromis_polyacanthus
ENSLAFG00000028434	POC1A	100	87.375	ENSAMEG00000009136	POC1A	99	83.619	Ailuropoda_melanoleuca
ENSLAFG00000028434	POC1A	99	72.241	ENSACIG00000018288	poc1a	98	59.908	Amphilophus_citrinellus
ENSLAFG00000028434	POC1A	99	74.582	ENSAOCG00000001066	POC1A	99	72.242	Amphiprion_ocellaris
ENSLAFG00000028434	POC1A	99	74.247	ENSAPEG00000005795	poc1a	89	72.787	Amphiprion_percula
ENSLAFG00000028434	POC1A	99	79.801	ENSAPLG00000007756	POC1A	99	71.782	Anas_platyrhynchos
ENSLAFG00000028434	POC1A	100	85.714	ENSANAG00000030897	POC1A	99	83.623	Aotus_nancymaae
ENSLAFG00000028434	POC1A	99	73.913	ENSACLG00000017869	POC1A	96	63.636	Astatotilapia_calliptera
ENSLAFG00000028434	POC1A	98	72.355	ENSAMXG00000024703	poc1a	84	70.432	Astyanax_mexicanus
ENSLAFG00000028434	POC1A	98	87.266	ENSBTAG00000001471	POC1A	99	82.703	Bos_taurus
ENSLAFG00000028434	POC1A	99	87.000	ENSCJAG00000005972	POC1A	99	83.623	Callithrix_jacchus
ENSLAFG00000028434	POC1A	99	80.000	ENSCAFG00020022379	POC1A	98	78.109	Canis_lupus_dingo
ENSLAFG00000028434	POC1A	99	88.333	ENSCHIG00000002571	POC1A	99	84.119	Capra_hircus
ENSLAFG00000028434	POC1A	99	88.333	ENSTSYG00000008302	POC1A	99	84.615	Carlito_syrichta
ENSLAFG00000028434	POC1A	98	84.871	ENSCAPG00000016201	POC1A	89	72.432	Cavia_aperea
ENSLAFG00000028434	POC1A	100	85.714	ENSCPOG00000006740	POC1A	99	81.773	Cavia_porcellus
ENSLAFG00000028434	POC1A	100	86.364	ENSCCAG00000023380	POC1A	99	84.119	Cebus_capucinus
ENSLAFG00000028434	POC1A	99	87.333	ENSCATG00000021822	POC1A	99	84.119	Cercocebus_atys
ENSLAFG00000028434	POC1A	99	79.333	ENSCLAG00000010593	POC1A	98	78.358	Chinchilla_lanigera
ENSLAFG00000028434	POC1A	98	87.640	ENSCSAG00000013862	POC1A	99	84.054	Chlorocebus_sabaeus
ENSLAFG00000028434	POC1A	90	78.676	ENSCPBG00000016728	POC1A	98	78.676	Chrysemys_picta_bellii
ENSLAFG00000028434	POC1A	93	66.192	ENSCSAVG00000008477	-	99	59.580	Ciona_savignyi
ENSLAFG00000028434	POC1A	99	88.000	ENSCANG00000033064	POC1A	99	84.011	Colobus_angolensis_palliatus
ENSLAFG00000028434	POC1A	99	87.333	ENSCGRG00001007357	Poc1a	98	81.407	Cricetulus_griseus_chok1gshd
ENSLAFG00000028434	POC1A	98	69.257	ENSCSEG00000010287	POC1A	93	62.404	Cynoglossus_semilaevis
ENSLAFG00000028434	POC1A	98	72.973	ENSCVAG00000015594	POC1A	95	63.415	Cyprinodon_variegatus
ENSLAFG00000028434	POC1A	99	64.333	ENSEBUG00000002614	POC1A	94	47.854	Eptatretus_burgeri
ENSLAFG00000028434	POC1A	89	45.143	ENSEBUG00000008246	POC1A	58	45.143	Eptatretus_burgeri
ENSLAFG00000028434	POC1A	96	57.439	ENSEBUG00000008013	poc1a	83	57.439	Eptatretus_burgeri
ENSLAFG00000028434	POC1A	99	73.579	ENSELUG00000015504	poc1a	97	63.570	Esox_lucius
ENSLAFG00000028434	POC1A	99	87.333	ENSFCAG00000015704	POC1A	99	84.367	Felis_catus
ENSLAFG00000028434	POC1A	99	76.510	ENSFALG00000008922	POC1A	99	68.873	Ficedula_albicollis
ENSLAFG00000028434	POC1A	100	86.711	ENSFDAG00000011606	POC1A	99	82.426	Fukomys_damarensis
ENSLAFG00000028434	POC1A	98	72.973	ENSFHEG00000015504	POC1A	96	72.148	Fundulus_heteroclitus
ENSLAFG00000028434	POC1A	99	77.000	ENSGALG00000034572	-	98	68.280	Gallus_gallus
ENSLAFG00000028434	POC1A	100	71.761	ENSGACG00000007015	poc1a	97	65.099	Gasterosteus_aculeatus
ENSLAFG00000028434	POC1A	99	79.333	ENSGAGG00000014637	POC1A	98	71.393	Gopherus_agassizii
ENSLAFG00000028434	POC1A	99	88.000	ENSGGOG00000006652	POC1A	99	84.119	Gorilla_gorilla
ENSLAFG00000028434	POC1A	99	86.667	ENSHGLG00000013436	POC1A	99	81.886	Heterocephalus_glaber_female
ENSLAFG00000028434	POC1A	99	86.667	ENSHGLG00100003479	POC1A	99	81.886	Heterocephalus_glaber_male
ENSLAFG00000028434	POC1A	99	70.569	ENSIPUG00000001227	POC1A	95	63.797	Ictalurus_punctatus
ENSLAFG00000028434	POC1A	99	86.667	ENSSTOG00000002638	POC1A	99	83.375	Ictidomys_tridecemlineatus
ENSLAFG00000028434	POC1A	99	88.667	ENSJJAG00000018739	Poc1a	99	84.367	Jaculus_jaculus
ENSLAFG00000028434	POC1A	98	75.926	ENSLBEG00000016119	POC1A	99	64.841	Labrus_bergylta
ENSLAFG00000028434	POC1A	99	74.667	ENSLACG00000018788	POC1A	98	64.665	Latimeria_chalumnae
ENSLAFG00000028434	POC1A	100	76.412	ENSLOCG00000013801	poc1a	96	67.654	Lepisosteus_oculatus
ENSLAFG00000028434	POC1A	88	86.891	ENSMFAG00000001970	POC1A	99	83.514	Macaca_fascicularis
ENSLAFG00000028434	POC1A	99	87.333	ENSMMUG00000012485	POC1A	99	84.119	Macaca_mulatta
ENSLAFG00000028434	POC1A	88	86.517	ENSMNEG00000042811	POC1A	99	83.243	Macaca_nemestrina
ENSLAFG00000028434	POC1A	99	87.333	ENSMLEG00000039574	POC1A	99	83.514	Mandrillus_leucophaeus
ENSLAFG00000028434	POC1A	98	72.364	ENSMAMG00000014233	POC1A	98	53.935	Mastacembelus_armatus
ENSLAFG00000028434	POC1A	99	73.913	ENSMZEG00005013503	POC1A	97	58.515	Maylandia_zebra
ENSLAFG00000028434	POC1A	100	76.238	ENSMGAG00000001628	POC1A	99	63.087	Meleagris_gallopavo
ENSLAFG00000028434	POC1A	100	87.375	ENSMAUG00000017403	Poc1a	98	82.161	Mesocricetus_auratus
ENSLAFG00000028434	POC1A	99	88.591	ENSMICG00000002709	POC1A	99	84.864	Microcebus_murinus
ENSLAFG00000028434	POC1A	99	88.255	ENSMOCG00000003396	Poc1a	98	82.114	Microtus_ochrogaster
ENSLAFG00000028434	POC1A	98	69.204	ENSMMOG00000010427	poc1a	95	60.794	Mola_mola
ENSLAFG00000028434	POC1A	100	78.073	ENSMODG00000011717	POC1A	96	70.161	Monodelphis_domestica
ENSLAFG00000028434	POC1A	99	73.244	ENSMALG00000009054	poc1a	96	62.129	Monopterus_albus
ENSLAFG00000028434	POC1A	100	87.375	MGP_CAROLIEiJ_G0032617	Poc1a	99	81.841	Mus_caroli
ENSLAFG00000028434	POC1A	100	87.375	ENSMUSG00000023345	Poc1a	99	81.841	Mus_musculus
ENSLAFG00000028434	POC1A	100	87.043	MGP_PahariEiJ_G0015485	Poc1a	99	81.592	Mus_pahari
ENSLAFG00000028434	POC1A	100	87.043	MGP_SPRETEiJ_G0033763	Poc1a	99	81.592	Mus_spretus
ENSLAFG00000028434	POC1A	99	87.667	ENSMPUG00000011723	POC1A	99	84.119	Mustela_putorius_furo
ENSLAFG00000028434	POC1A	99	87.333	ENSMLUG00000015092	POC1A	92	82.512	Myotis_lucifugus
ENSLAFG00000028434	POC1A	100	87.708	ENSNGAG00000005212	Poc1a	99	83.375	Nannospalax_galili
ENSLAFG00000028434	POC1A	98	73.220	ENSNBRG00000022135	poc1a	96	62.315	Neolamprologus_brichardi
ENSLAFG00000028434	POC1A	99	88.000	ENSNLEG00000007084	POC1A	99	83.784	Nomascus_leucogenys
ENSLAFG00000028434	POC1A	79	96.667	ENSMEUG00000007715	-	78	96.667	Notamacropus_eugenii
ENSLAFG00000028434	POC1A	98	86.296	ENSOPRG00000008831	POC1A	91	80.749	Ochotona_princeps
ENSLAFG00000028434	POC1A	99	86.622	ENSODEG00000018290	POC1A	100	83.498	Octodon_degus
ENSLAFG00000028434	POC1A	99	73.579	ENSONIG00000014378	POC1A	97	58.297	Oreochromis_niloticus
ENSLAFG00000028434	POC1A	98	87.266	ENSOCUG00000002080	POC1A	99	83.514	Oryctolagus_cuniculus
ENSLAFG00000028434	POC1A	98	70.608	ENSOMEG00000019834	POC1A	76	70.370	Oryzias_melastigma
ENSLAFG00000028434	POC1A	99	88.963	ENSOGAG00000032245	POC1A	99	77.995	Otolemur_garnettii
ENSLAFG00000028434	POC1A	100	88.372	ENSOARG00000006352	POC1A	99	84.119	Ovis_aries
ENSLAFG00000028434	POC1A	99	88.000	ENSPPAG00000043583	POC1A	99	83.784	Pan_paniscus
ENSLAFG00000028434	POC1A	99	87.333	ENSPPRG00000003365	POC1A	99	84.367	Panthera_pardus
ENSLAFG00000028434	POC1A	98	86.517	ENSPTIG00000005388	POC1A	99	83.514	Panthera_tigris_altaica
ENSLAFG00000028434	POC1A	99	88.814	ENSPTRG00000014989	POC1A	99	84.054	Pan_troglodytes
ENSLAFG00000028434	POC1A	100	79.734	ENSPSIG00000014809	POC1A	86	79.734	Pelodiscus_sinensis
ENSLAFG00000028434	POC1A	99	71.906	ENSPMGG00000005356	poc1a	98	64.356	Periophthalmus_magnuspinnatus
ENSLAFG00000028434	POC1A	100	86.711	ENSPEMG00000024131	Poc1a	95	84.936	Peromyscus_maniculatus_bairdii
ENSLAFG00000028434	POC1A	100	73.090	ENSPMAG00000000333	poc1a	76	73.333	Petromyzon_marinus
ENSLAFG00000028434	POC1A	98	79.054	ENSPCIG00000018160	POC1A	98	72.682	Phascolarctos_cinereus
ENSLAFG00000028434	POC1A	99	88.000	ENSPPYG00000013816	POC1A	99	84.367	Pongo_abelii
ENSLAFG00000028434	POC1A	99	87.625	ENSPCAG00000002118	POC1A	99	85.608	Procavia_capensis
ENSLAFG00000028434	POC1A	99	88.926	ENSPCOG00000012625	POC1A	99	83.784	Propithecus_coquereli
ENSLAFG00000028434	POC1A	99	75.667	ENSPVAG00000012480	POC1A	99	65.261	Pteropus_vampyrus
ENSLAFG00000028434	POC1A	99	73.913	ENSPNYG00000019517	poc1a	96	67.424	Pundamilia_nyererei
ENSLAFG00000028434	POC1A	99	75.667	ENSPNAG00000007556	POC1A	96	65.258	Pygocentrus_nattereri
ENSLAFG00000028434	POC1A	98	85.768	ENSRNOG00000037295	Poc1a	99	77.507	Rattus_norvegicus
ENSLAFG00000028434	POC1A	99	88.000	ENSRBIG00000031748	POC1A	99	84.324	Rhinopithecus_bieti
ENSLAFG00000028434	POC1A	99	88.000	ENSRROG00000044472	POC1A	99	84.324	Rhinopithecus_roxellana
ENSLAFG00000028434	POC1A	100	86.364	ENSSBOG00000027902	POC1A	99	83.784	Saimiri_boliviensis_boliviensis
ENSLAFG00000028434	POC1A	99	72.910	ENSSMAG00000013505	POC1A	97	64.677	Scophthalmus_maximus
ENSLAFG00000028434	POC1A	99	73.579	ENSSDUG00000016161	POC1A	98	54.584	Seriola_dumerili
ENSLAFG00000028434	POC1A	99	73.244	ENSSLDG00000003828	POC1A	99	71.521	Seriola_lalandi_dorsalis
ENSLAFG00000028434	POC1A	96	83.673	ENSSPUG00000008656	POC1A	99	56.982	Sphenodon_punctatus
ENSLAFG00000028434	POC1A	100	55.172	ENSSPAG00000020330	POC1A	94	52.594	Stegastes_partitus
ENSLAFG00000028434	POC1A	99	86.667	ENSSSCG00000011426	POC1A	99	83.375	Sus_scrofa
ENSLAFG00000028434	POC1A	99	76.000	ENSTGUG00000006036	POC1A	99	69.154	Taeniopygia_guttata
ENSLAFG00000028434	POC1A	98	68.243	ENSTRUG00000007900	POC1A	96	56.633	Takifugu_rubripes
ENSLAFG00000028434	POC1A	99	68.000	ENSTNIG00000014818	POC1A	97	61.808	Tetraodon_nigroviridis
ENSLAFG00000028434	POC1A	99	87.000	ENSTTRG00000016798	POC1A	99	80.893	Tursiops_truncatus
ENSLAFG00000028434	POC1A	100	87.708	ENSUAMG00000020816	POC1A	99	83.744	Ursus_americanus
ENSLAFG00000028434	POC1A	98	86.891	ENSUMAG00000021482	POC1A	99	82.703	Ursus_maritimus
ENSLAFG00000028434	POC1A	99	70.903	ENSXETG00000010813	poc1a	95	60.427	Xenopus_tropicalis