EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000028536 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 17281 bases
Position: chrscaffold_4:8779010-8796290
Accession: 11150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027905	RRM_1	PF00076.22	1.6e-18	1	1
ENSLAFP00000028751	RRM_1	PF00076.22	2.2e-18	1	1
ENSLAFP00000027905	U1snRNP70_N	PF12220.8	1.5e-28	1	1
ENSLAFP00000028751	U1snRNP70_N	PF12220.8	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031911	SNRNP70-201	756	-	ENSLAFP00000028751	252 (aa)	-	G3ULP2
ENSLAFT00000035229	SNRNP70-202	693	-	ENSLAFP00000027905	231 (aa)	-	G3UJ97

Gene Model

Click here to download ENSLAFG00000028536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000028536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000028536	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSLAFG00000028536	SNRNP70	61	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSLAFG00000028536	SNRNP70	99	96.104	ENSAMEG00000014468	SNRNP70	53	94.397	Ailuropoda_melanoleuca
ENSLAFG00000028536	SNRNP70	97	92.825	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSLAFG00000028536	SNRNP70	96	97.297	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSLAFG00000028536	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	99	97.561	Aotus_nancymaae
ENSLAFG00000028536	SNRNP70	71	97.561	ENSBTAG00000048800	-	99	97.561	Bos_taurus
ENSLAFG00000028536	SNRNP70	87	54.950	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCJAG00000000193	SNRNP70	99	97.561	Callithrix_jacchus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCAFG00000003711	SNRNP70	99	97.561	Canis_familiaris
ENSLAFG00000028536	SNRNP70	100	96.996	ENSCAFG00020025470	SNRNP70	99	93.373	Canis_lupus_dingo
ENSLAFG00000028536	SNRNP70	71	97.561	ENSCHIG00000018534	-	99	97.561	Capra_hircus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCPOG00000019589	SNRNP70	53	100.000	Cavia_porcellus
ENSLAFG00000028536	SNRNP70	79	100.000	ENSCCAG00000036551	SNRNP70	52	93.035	Cebus_capucinus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCATG00000016149	SNRNP70	53	100.000	Cercocebus_atys
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCLAG00000007991	SNRNP70	53	100.000	Chinchilla_lanigera
ENSLAFG00000028536	SNRNP70	96	100.000	ENSCSAG00000002759	SNRNP70	52	100.000	Chlorocebus_sabaeus
ENSLAFG00000028536	SNRNP70	96	99.099	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSLAFG00000028536	SNRNP70	92	68.692	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCANG00000036607	SNRNP70	99	95.122	Colobus_angolensis_palliatus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCGRG00001020676	Snrnp70	52	100.000	Cricetulus_griseus_chok1gshd
ENSLAFG00000028536	SNRNP70	100	100.000	ENSCGRG00000018048	Snrnp70	52	100.000	Cricetulus_griseus_crigri
ENSLAFG00000028536	SNRNP70	97	91.480	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSLAFG00000028536	SNRNP70	69	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSLAFG00000028536	SNRNP70	97	91.031	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSLAFG00000028536	SNRNP70	71	97.561	ENSDNOG00000035849	-	99	97.561	Dasypus_novemcinctus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSDORG00000010228	Snrnp70	52	100.000	Dipodomys_ordii
ENSLAFG00000028536	SNRNP70	100	100.000	ENSEASG00005004917	SNRNP70	53	100.000	Equus_asinus_asinus
ENSLAFG00000028536	SNRNP70	71	97.561	ENSECAG00000013936	-	99	97.561	Equus_caballus
ENSLAFG00000028536	SNRNP70	99	77.391	ENSEEUG00000005666	SNRNP70	57	73.810	Erinaceus_europaeus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSFCAG00000042603	SNRNP70	55	100.000	Felis_catus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSFDAG00000013830	SNRNP70	95	97.531	Fukomys_damarensis
ENSLAFG00000028536	SNRNP70	96	91.441	ENSFHEG00000010298	snrnp70	53	83.534	Fundulus_heteroclitus
ENSLAFG00000028536	SNRNP70	96	91.403	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSLAFG00000028536	SNRNP70	96	91.892	ENSGAFG00000003395	snrnp70	54	83.465	Gambusia_affinis
ENSLAFG00000028536	SNRNP70	97	91.928	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSLAFG00000028536	SNRNP70	69	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSLAFG00000028536	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	99	97.561	Gorilla_gorilla
ENSLAFG00000028536	SNRNP70	71	97.561	ENSHGLG00100001651	-	99	97.561	Heterocephalus_glaber_male
ENSLAFG00000028536	SNRNP70	71	97.561	ENSSTOG00000013988	-	99	97.561	Ictidomys_tridecemlineatus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSJJAG00000002614	Snrnp70	52	100.000	Jaculus_jaculus
ENSLAFG00000028536	SNRNP70	96	92.342	ENSKMAG00000005608	snrnp70	55	83.203	Kryptolebias_marmoratus
ENSLAFG00000028536	SNRNP70	94	91.667	ENSLACG00000015684	SNRNP70	52	83.333	Latimeria_chalumnae
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMFAG00000039824	SNRNP70	53	100.000	Macaca_fascicularis
ENSLAFG00000028536	SNRNP70	96	100.000	ENSMMUG00000004928	SNRNP70	99	97.561	Macaca_mulatta
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMNEG00000038057	SNRNP70	54	100.000	Macaca_nemestrina
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMLEG00000030967	SNRNP70	53	100.000	Mandrillus_leucophaeus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMAUG00000020970	Snrnp70	52	100.000	Mesocricetus_auratus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	99	97.561	Microcebus_murinus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMOCG00000012825	Snrnp70	52	100.000	Microtus_ochrogaster
ENSLAFG00000028536	SNRNP70	100	100.000	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSLAFG00000028536	SNRNP70	100	100.000	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSLAFG00000028536	SNRNP70	100	100.000	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMPUG00000003258	SNRNP70	53	100.000	Mustela_putorius_furo
ENSLAFG00000028536	SNRNP70	100	100.000	ENSMLUG00000011766	SNRNP70	53	100.000	Myotis_lucifugus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSLAFG00000028536	SNRNP70	97	92.377	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSLAFG00000028536	SNRNP70	97	100.000	ENSNLEG00000004899	SNRNP70	98	93.469	Nomascus_leucogenys
ENSLAFG00000028536	SNRNP70	100	100.000	ENSODEG00000017499	SNRNP70	50	100.000	Octodon_degus
ENSLAFG00000028536	SNRNP70	97	91.928	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSLAFG00000028536	SNRNP70	96	99.550	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSOCUG00000015081	SNRNP70	51	100.000	Oryctolagus_cuniculus
ENSLAFG00000028536	SNRNP70	100	99.569	ENSOGAG00000029310	SNRNP70	53	99.569	Otolemur_garnettii
ENSLAFG00000028536	SNRNP70	96	100.000	ENSOARG00000012608	SNRNP70	60	100.000	Ovis_aries
ENSLAFG00000028536	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	99	97.561	Pan_paniscus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSPPRG00000005579	SNRNP70	53	100.000	Panthera_pardus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	99	97.561	Pan_troglodytes
ENSLAFG00000028536	SNRNP70	100	100.000	ENSPANG00000004068	SNRNP70	53	100.000	Papio_anubis
ENSLAFG00000028536	SNRNP70	70	79.012	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSLAFG00000028536	SNRNP70	99	87.281	ENSPSIG00000015251	SNRNP70	99	79.528	Pelodiscus_sinensis
ENSLAFG00000028536	SNRNP70	70	90.062	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSPEMG00000019011	Snrnp70	52	100.000	Peromyscus_maniculatus_bairdii
ENSLAFG00000028536	SNRNP70	84	83.938	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSLAFG00000028536	SNRNP70	96	100.000	ENSPCIG00000007296	SNRNP70	52	100.000	Phascolarctos_cinereus
ENSLAFG00000028536	SNRNP70	96	92.342	ENSPFOG00000016671	snrnp70	54	83.465	Poecilia_formosa
ENSLAFG00000028536	SNRNP70	96	92.342	ENSPLAG00000005912	snrnp70	54	83.465	Poecilia_latipinna
ENSLAFG00000028536	SNRNP70	96	92.342	ENSPMEG00000008496	snrnp70	54	83.465	Poecilia_mexicana
ENSLAFG00000028536	SNRNP70	96	92.342	ENSPREG00000005486	snrnp70	54	83.465	Poecilia_reticulata
ENSLAFG00000028536	SNRNP70	100	99.134	ENSPPYG00000010234	SNRNP70	53	99.134	Pongo_abelii
ENSLAFG00000028536	SNRNP70	99	91.739	ENSPCOG00000023103	SNRNP70	89	85.714	Propithecus_coquereli
ENSLAFG00000028536	SNRNP70	99	93.913	ENSPVAG00000009578	SNRNP70	53	93.939	Pteropus_vampyrus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSRBIG00000042387	SNRNP70	93	93.254	Rhinopithecus_bieti
ENSLAFG00000028536	SNRNP70	100	100.000	ENSRROG00000033636	SNRNP70	93	93.254	Rhinopithecus_roxellana
ENSLAFG00000028536	SNRNP70	100	100.000	ENSSBOG00000020026	SNRNP70	99	97.561	Saimiri_boliviensis_boliviensis
ENSLAFG00000028536	SNRNP70	96	100.000	ENSSHAG00000002194	SNRNP70	52	100.000	Sarcophilus_harrisii
ENSLAFG00000028536	SNRNP70	96	98.649	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSLAFG00000028536	SNRNP70	71	97.561	ENSSSCG00000023792	-	99	97.561	Sus_scrofa
ENSLAFG00000028536	SNRNP70	100	100.000	ENSTTRG00000017099	SNRNP70	53	100.000	Tursiops_truncatus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSUAMG00000016147	SNRNP70	53	100.000	Ursus_americanus
ENSLAFG00000028536	SNRNP70	100	100.000	ENSUMAG00000001467	SNRNP70	99	97.561	Ursus_maritimus
ENSLAFG00000028536	SNRNP70	96	85.520	ENSVPAG00000005959	-	100	83.408	Vicugna_pacos
ENSLAFG00000028536	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	99	97.561	Vulpes_vulpes
ENSLAFG00000028536	SNRNP70	98	95.595	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis
ENSLAFG00000028536	SNRNP70	96	92.342	ENSXMAG00000012789	snrnp70	54	83.465	Xiphophorus_maculatus